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The map label for this gene is rimP [H]

Identifier: 150398624

GI number: 150398624

Start: 3643702

End: 3644319

Strand: Direct

Name: rimP [H]

Synonym: Smed_3438

Alternate gene names: 150398624

Gene position: 3643702-3644319 (Clockwise)

Preceding gene: 150398622

Following gene: 150398625

Centisome position: 96.35

GC content: 61.17

Gene sequence:

>618_bases
TTGTCCGATACGACAACGGCTGAAAATGCAAATGAACCCCGGCTGATTACCGAGACGGGCCTCGACCGGCGTGTTGCCGA
TATCATCGAGCCGGTGCTCGTGGACCTGGGATTCCGTCTGGTGCGCGTGCGCATGTCCGGCCAGAACGGCCTGACGCTGC
AGGTCATGACCGAACGCAACGATGGCACCATGACCGTCGAGGATTGCGAGGAAGTCTCCAAGGCGATCTCGCCGGTTCTC
GATGTGGAAGATCCGATCGACAAGGCGTATCATCTCGAAGTGTCGTCGCCGGGCATCGATCGTCCCATGGTGCGCAGGTC
CGACTTCATCCGCTGGCAGGGCCATCTGCTGAAGTGCGAGACGTCGGTTCTGGTCGAGGGGCGCAAGCGCTTCCGCGGCA
AGATCGTATCGGTGGACGAGGATGGTTTCCGCCTCGAACGCGACCAGCCGGCCTATGGCGAAGAGGCCGGCGTAACGATC
CCGTTCACGGCGCTTTCCGAGGCGCGCCTGATCCTGACGGACGAGCTCATCCGCGACGCTCTGACAGCCGACAAGAAGGC
GAAGGCCGCGCGCGCCGCCAACGAAAACTTCGAAGAAGAAGATAGAGATATCGAATAA

Upstream 100 bases:

>100_bases
GAAGCGTATATGACGCTCAAATTCTTGATCGGTTAGATGAAGGGTGGGGCCGTGAGGACCCGCTCTTTTTTATTAGCCGG
TCCGACGAGGAGAGGATCGT

Downstream 100 bases:

>100_bases
AGCTGGGTGCGCTTTCGATGCGCCTGCAACAGACGGAGACAAGAGACATGGCAGTCAGTGCTAACCGGCTCGAACTTCTG
CAGATCGCAGATGCTGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSDTTTAENANEPRLITETGLDRRVADIIEPVLVDLGFRLVRVRMSGQNGLTLQVMTERNDGTMTVEDCEEVSKAISPVL
DVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLLKCETSVLVEGRKRFRGKIVSVDEDGFRLERDQPAYGEEAGVTI
PFTALSEARLILTDELIRDALTADKKAKAARAANENFEEEDRDIE

Sequences:

>Translated_205_residues
MSDTTTAENANEPRLITETGLDRRVADIIEPVLVDLGFRLVRVRMSGQNGLTLQVMTERNDGTMTVEDCEEVSKAISPVL
DVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLLKCETSVLVEGRKRFRGKIVSVDEDGFRLERDQPAYGEEAGVTI
PFTALSEARLILTDELIRDALTADKKAKAARAANENFEEEDRDIE
>Mature_204_residues
SDTTTAENANEPRLITETGLDRRVADIIEPVLVDLGFRLVRVRMSGQNGLTLQVMTERNDGTMTVEDCEEVSKAISPVLD
VEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLLKCETSVLVEGRKRFRGKIVSVDEDGFRLERDQPAYGEEAGVTIP
FTALSEARLILTDELIRDALTADKKAKAARAANENFEEEDRDIE

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=119, Percent_Identity=37.8151260504202, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 23018; Mature: 22887

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTTTAENANEPRLITETGLDRRVADIIEPVLVDLGFRLVRVRMSGQNGLTLQVMTERN
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEECC
DGTMTVEDCEEVSKAISPVLDVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLLKCE
CCEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCHHEECCEEEEEC
TSVLVEGRKRFRGKIVSVDEDGFRLERDQPAYGEEAGVTIPFTALSEARLILTDELIRDA
HHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCCCCCCEEEEHHCCCCCHHHHHHHHHHH
LTADKKAKAARAANENFEEEDRDIE
HHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SDTTTAENANEPRLITETGLDRRVADIIEPVLVDLGFRLVRVRMSGQNGLTLQVMTERN
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEECC
DGTMTVEDCEEVSKAISPVLDVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLLKCE
CCEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCHHEECCEEEEEC
TSVLVEGRKRFRGKIVSVDEDGFRLERDQPAYGEEAGVTIPFTALSEARLILTDELIRDA
HHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCCCCCCEEEEHHCCCCCHHHHHHHHHHH
LTADKKAKAARAANENFEEEDRDIE
HHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]