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The map label for this gene is recR [H]

Identifier: 150398621

GI number: 150398621

Start: 3639751

End: 3640356

Strand: Direct

Name: recR [H]

Synonym: Smed_3435

Alternate gene names: 150398621

Gene position: 3639751-3640356 (Clockwise)

Preceding gene: 150398620

Following gene: 150398622

Centisome position: 96.24

GC content: 65.02

Gene sequence:

>606_bases
ATGGCAAAGCGAGTCACCGGTCCCGAAATTGAAAAGCTCATCCAGCTCCTGGCGAAGGTTCCGGGTCTCGGACCCCGTTC
CGCTCGCCGCGCGGCGTTGCATCTCGTCAAGAAGAAGGAGCAGCTGCTCGGGCCGCTTGCCGAGGCCATGGGCGAGGCCC
ATCGCAAGGTCAAGATCTGCTCCTGCTGCGGCAATGTCGACACCATCGATCCCTGCACGGTCTGCGGCGACGAGCGGCGC
GATCAGGCGGTGATCATCGTCGTCGAAGACGTCGCCGATCTCTGGGCGCTGGAGCGCGCCGGCGCGATGAACGCCGCCTA
TCACGTGCTCGGCGGCACGCTCTCGCCGCTCGACGGCATCGGGCCGGAAGATCTGAACATAAGGGCATTGGTCGATCGTG
TCGCCAAGGGCGGCGTGCGCGAGCTGATCATCGCCGTCAACGCCACGGTCGAGGGCCAGACGACAGCGCATTACATCACC
GATCAGCTCGAAGGGATGGAGGTGAGGATCACCCGCCTCGCTCATGGTGTCCCCGTCGGCGGCGAGCTGGACTATCTTGA
CGAGGGAACGCTCGCTGCCGCGCTGAGAGCGAGAACGGCGATCTGA

Upstream 100 bases:

>100_bases
TGATTTCCGGGCAAATGCGATAAAATGCTCCGTGTCTTCGTCCTCGAATCGCGATCGATTTAAGGAGACATGCACTATGC
GGTTGGTCTAAAAGCCGGGC

Downstream 100 bases:

>100_bases
GAATTCGCCTCAAGCTTCGATAACAAGGAAAAGAGATGCTGAGATTCCTTTCCGTCCTGTTCCTGGCCAGCCTGTTCTTT
GTCTCCGCCTCCTTCGCTGC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKICSCCGNVDTIDPCTVCGDERR
DQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGIGPEDLNIRALVDRVAKGGVRELIIAVNATVEGQTTAHYIT
DQLEGMEVRITRLAHGVPVGGELDYLDEGTLAAALRARTAI

Sequences:

>Translated_201_residues
MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKICSCCGNVDTIDPCTVCGDERR
DQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGIGPEDLNIRALVDRVAKGGVRELIIAVNATVEGQTTAHYIT
DQLEGMEVRITRLAHGVPVGGELDYLDEGTLAAALRARTAI
>Mature_200_residues
AKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKICSCCGNVDTIDPCTVCGDERRD
QAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGIGPEDLNIRALVDRVAKGGVRELIIAVNATVEGQTTAHYITD
QLEGMEVRITRLAHGVPVGGELDYLDEGTLAAALRARTAI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=197, Percent_Identity=40.1015228426396, Blast_Score=148, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21428; Mature: 21297

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCCGNVDTIDPCTVCGDERRDQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGI
HHCCCCCCCCCHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
GPEDLNIRALVDRVAKGGVRELIIAVNATVEGQTTAHYITDQLEGMEVRITRLAHGVPVG
CCCCCHHHHHHHHHHHCCHHHEEEEECCEECCCHHHHHHHHHHCCHHEEEEHHHCCCCCC
GELDYLDEGTLAAALRARTAI
CCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKEQLLGPLAEAMGEAHRKVKIC
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCCGNVDTIDPCTVCGDERRDQAVIIVVEDVADLWALERAGAMNAAYHVLGGTLSPLDGI
HHCCCCCCCCCHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
GPEDLNIRALVDRVAKGGVRELIIAVNATVEGQTTAHYITDQLEGMEVRITRLAHGVPVG
CCCCCHHHHHHHHHHHCCHHHEEEEECCEECCCHHHHHHHHHHCCHHEEEEHHHCCCCCC
GELDYLDEGTLAAALRARTAI
CCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]