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The map label for this gene is rhtB [C]

Identifier: 150398620

GI number: 150398620

Start: 3639042

End: 3639653

Strand: Direct

Name: rhtB [C]

Synonym: Smed_3434

Alternate gene names: 150398620

Gene position: 3639042-3639653 (Clockwise)

Preceding gene: 150398619

Following gene: 150398621

Centisome position: 96.22

GC content: 64.71

Gene sequence:

>612_bases
ATGAGCATCGCATCGCTGCTCGTCTTTGCCGGTGCGCTTTTGATCGCCGCCGGCTCGCCGGGGCCGAGCATCGCAGCGCT
CGTCGCCCGTGTGCTCGCCAAAGGCGCACGTGACGTCTTGCCTTTCCTCGCCGCCATGTGGATCGGCGAGGCGGTCTGGC
TCTCCTTCGCGGTTGCCGGCCTCGCGGCGATCGCCGGGACGTTCCATTGGGTTTTCGTCGCGATCAAATGGGCCGGTGTC
GCCTATCTCCTCTTTCTCGCCTGGAAAATGTGGGCGGCCGAGCCGCAAATGCCCGGCGAAAATATTCCGGAAACCCGGTC
TTCATCGAAGATGTTCTTCGCCGGGCTGACGGTCACGCTCGGCAATCCCAAGATCATGATGTTCTATGTGGCGCTGCTTC
CCTCGATCATCGATCTCGGCTCGGTCGGCCTCTTCGGCTGGGCAGAGTTGGTCGCCACCATGTTCGCCGTGCTCGTCGTC
ATCGATCTGGCCTGGGTGCTGATGGCCGCGAAGGCGCGGCAGTTCCTGAAAAGCCGCCGTGCGGTCCGGATCGTCAACCG
GGCCAGCGCCGGCACGATGGCCGGAGCGGCGGTGGCCATCGCGGTGCGTTGA

Upstream 100 bases:

>100_bases
TGCCGTTCTGATCTCCGGTTCCTCGGCCGCTGCCCCGTGATCGCTGTTTTGGGCGGGAAAGCGTGCTATATTGCCCGCCG
TTTGCGGGAGGGATAATGAC

Downstream 100 bases:

>100_bases
TTTCCGGGCAAATGCGATAAAATGCTCCGTGTCTTCGTCCTCGAATCGCGATCGATTTAAGGAGACATGCACTATGCGGT
TGGTCTAAAAGCCGGGCATG

Product: lysine exporter protein LysE/YggA

Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]

Alternate protein names: Lysine Exporter Protein; Translocator Protein LysE Family; Amino Acid Efflux Protein; Homoserine/Homoserine Lactone Efflux Protein; RhtB Family Transporter; Threonine Efflux Protein; Amino Acid Transporter LysE; Lysine Exporter Family Protein; Lysine Exporter LysE/YggA; Transmembrane Efflux Protein; Transmembrane Amino Acid Efflux Protein; Homoserine/Homoserine Lactone Efflux Pump; LysE Family Efflux Protein; Transmembrane Efflux Protein Homoserine/Threonine Family; Lyse Translocator Family Protein; ABC Transporter Membrane Protein; Amino Acid Efflux Pump RhtB Family Protein; Homoserine/Homoserine Lactoneefflux Protein; Lysine Export Protein; LysE-Type Translocator; LysE Type Translocator Family; LysE Family Protein; Amino Acid Efflux Protein LysE Family; Transporter LysE Family; Efflux Protein; Transporter Lyse Family; LysE Family Translocator Protein; Translocator Protein LysE Family Protein; LysE Family Transporter; Glycosyltransferase; LysE Family Amino Acid Efflux Protein; Efflux Protein RhtB

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSIASLLVFAGALLIAAGSPGPSIAALVARVLAKGARDVLPFLAAMWIGEAVWLSFAVAGLAAIAGTFHWVFVAIKWAGV
AYLLFLAWKMWAAEPQMPGENIPETRSSSKMFFAGLTVTLGNPKIMMFYVALLPSIIDLGSVGLFGWAELVATMFAVLVV
IDLAWVLMAAKARQFLKSRRAVRIVNRASAGTMAGAAVAIAVR

Sequences:

>Translated_203_residues
MSIASLLVFAGALLIAAGSPGPSIAALVARVLAKGARDVLPFLAAMWIGEAVWLSFAVAGLAAIAGTFHWVFVAIKWAGV
AYLLFLAWKMWAAEPQMPGENIPETRSSSKMFFAGLTVTLGNPKIMMFYVALLPSIIDLGSVGLFGWAELVATMFAVLVV
IDLAWVLMAAKARQFLKSRRAVRIVNRASAGTMAGAAVAIAVR
>Mature_202_residues
SIASLLVFAGALLIAAGSPGPSIAALVARVLAKGARDVLPFLAAMWIGEAVWLSFAVAGLAAIAGTFHWVFVAIKWAGVA
YLLFLAWKMWAAEPQMPGENIPETRSSSKMFFAGLTVTLGNPKIMMFYVALLPSIIDLGSVGLFGWAELVATMFAVLVVI
DLAWVLMAAKARQFLKSRRAVRIVNRASAGTMAGAAVAIAVR

Specific function: Conducts The Efflux Of Homoserine And Homoserine Lactone. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21466; Mature: 21335

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIASLLVFAGALLIAAGSPGPSIAALVARVLAKGARDVLPFLAAMWIGEAVWLSFAVAG
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LAAIAGTFHWVFVAIKWAGVAYLLFLAWKMWAAEPQMPGENIPETRSSSKMFFAGLTVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEE
GNPKIMMFYVALLPSIIDLGSVGLFGWAELVATMFAVLVVIDLAWVLMAAKARQFLKSRR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVRIVNRASAGTMAGAAVAIAVR
HHHHHHHCCCCHHHHHHEEEEEC
>Mature Secondary Structure 
SIASLLVFAGALLIAAGSPGPSIAALVARVLAKGARDVLPFLAAMWIGEAVWLSFAVAG
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LAAIAGTFHWVFVAIKWAGVAYLLFLAWKMWAAEPQMPGENIPETRSSSKMFFAGLTVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEE
GNPKIMMFYVALLPSIIDLGSVGLFGWAELVATMFAVLVVIDLAWVLMAAKARQFLKSRR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVRIVNRASAGTMAGAAVAIAVR
HHHHHHHCCCCHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA