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The map label for this gene is ybaB [C]

Identifier: 150398619

GI number: 150398619

Start: 3638629

End: 3638952

Strand: Direct

Name: ybaB [C]

Synonym: Smed_3433

Alternate gene names: 150398619

Gene position: 3638629-3638952 (Clockwise)

Preceding gene: 150398618

Following gene: 150398620

Centisome position: 96.21

GC content: 59.57

Gene sequence:

>324_bases
ATGCGCGACATCATGGGTATGATGGGCAAGGTCAAGGAAATGCAGGCCAAGATGGAGAAGATGCAGGCTGAGATCGCCGC
GCTCGAAATCGACGGCGCCTCCGGCGGCGGCCTCGTCACCGTTCGCCTCGACGGCAAGGGCCATATGAAAAGCCTGAAAA
TCGACCCATCGCTCTTCAAGGAAGACGACGTCGAGATCCTCGAAGATCTCATCGTGGCTGCCCATAAGGATGCCAAGGAT
AAAGCCGAGGCGGTGCAGGCGGAAAAGACCCGCGAACTGACCGCGGGATTGCCGATCCCCCCGGGCATGAAGCTGCCGTT
CTGA

Upstream 100 bases:

>100_bases
CGGCACTTTGGAGCACTTCCAGGAAGACTGTGTAAAGGTTTTCCGCCCGGACGTGCGTAGCGATAAAACACTTGGAAATA
CCAAAGGACAGGAGACGACG

Downstream 100 bases:

>100_bases
TCTCCGGTTCCTCGGCCGCTGCCCCGTGATCGCTGTTTTGGGCGGGAAAGCGTGCTATATTGCCCGCCGTTTGCGGGAGG
GATAATGACATGAGCATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRDIMGMMGKVKEMQAKMEKMQAEIAALEIDGASGGGLVTVRLDGKGHMKSLKIDPSLFKEDDVEILEDLIVAAHKDAKD
KAEAVQAEKTRELTAGLPIPPGMKLPF

Sequences:

>Translated_107_residues
MRDIMGMMGKVKEMQAKMEKMQAEIAALEIDGASGGGLVTVRLDGKGHMKSLKIDPSLFKEDDVEILEDLIVAAHKDAKD
KAEAVQAEKTRELTAGLPIPPGMKLPF
>Mature_107_residues
MRDIMGMMGKVKEMQAKMEKMQAEIAALEIDGASGGGLVTVRLDGKGHMKSLKIDPSLFKEDDVEILEDLIVAAHKDAKD
KAEAVQAEKTRELTAGLPIPPGMKLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=102, Percent_Identity=48.0392156862745, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 11606; Mature: 11606

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.4 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.4 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDIMGMMGKVKEMQAKMEKMQAEIAALEIDGASGGGLVTVRLDGKGHMKSLKIDPSLFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCEEEECCHHHCC
EDDVEILEDLIVAAHKDAKDKAEAVQAEKTRELTAGLPIPPGMKLPF
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRDIMGMMGKVKEMQAKMEKMQAEIAALEIDGASGGGLVTVRLDGKGHMKSLKIDPSLFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCEEEECCHHHCC
EDDVEILEDLIVAAHKDAKDKAEAVQAEKTRELTAGLPIPPGMKLPF
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]