Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is yhhX [C]
Identifier: 150398520
GI number: 150398520
Start: 3528552
End: 3529700
Strand: Direct
Name: yhhX [C]
Synonym: Smed_3331
Alternate gene names: 150398520
Gene position: 3528552-3529700 (Clockwise)
Preceding gene: 150398519
Following gene: 150398521
Centisome position: 93.3
GC content: 62.32
Gene sequence:
>1149_bases ATGCCGCGTTTGGGAATCATTCTGCACGGCGTTACCGGCCGGATGGGTTACAATCAGCATCTGGTGCGATCGGTTCTGGC CATCCGCGATCAAGGCGGGATAATGCTCAAATCCGGCGGACGGCTGGAGATCGATCCGATTATCGTCGGGCGCAATCGCG ACAAGATCGAGCAACTGGCGAAGCGGCATGATATCGCGCGCTGGTCGACGGACCTCGATGCGGCACTTGCCGATCCGAAC GATCAGATCTTCTTCGATGCGGGCACGACGCTGATGCGCGCAGAACTCATCGGCCGCGCTCTCGACGCAGGCAAGCATGT CTATTGCGAGAAGCCGGTCTCCGACGATCTCAGGACCGCCGTCAAACTGGCGCGCAAGGCACGCGCCTCCGGCCTCAAGC ACGGCGTCGTGCAGGACAAGCTGTTTCTGCCGGGCCTTCAGAAGTTGGCTCTGCTCAGGGATTCAGGCTTCTTCGGCAAG ATCCTCTCGGTGCGCGGGGAGTTCGGCTATTGGGTGTTCGAAGGCGATTGGGGCGTTCCGGCCCAGCGGCCTTCCTGGAA CTACCGAAAGAAGGACGGCGGCGGCATCATCCTCGACATGCTCTGCCACTGGCGCTACGTGCTCGACAATCTTTTCGGCG AGGTGAAGGCGGTCTCATGCCTCGGCGCCACCCATATCTCAAGCCGCATCGACGAGCAGGGCCGCGCCTATGACTGCGAC ACTGACGATGCGGCCTATGCCACTTTCGAACTCGAAGGCGGCGTGATCGCGCAGATCAATTCCTCCTGGACGGTCCGGGT GCGCCGTGACGATCTCGTCACCTTCCAGGTCGATGGAACGCACGGTTCCGCCGTGGCGGGGCTGACGAAGTGCTGGACGC AGCACCGCGTCAATACGCCGAAGCCGGTCTGGAACCCGGATCAGCCGCAGACGATCGATTTCTACGAGACCTGGGACGAA GTTCCGGACACGCAAGCCTTCGACAACGGCTTCAAGGCGCAATGGGAAATGTTCCTGCGCCACGTAGCCGAGGACAGCCC ATGGCCCTACGGGCTGGAGGCTGGCGCCAAGGGCGTGCAGCTCGCCGAACTGGGCTTGAAATCCTGGGCGGAGCGCCGCT GGCTCGACGTTCCGGAACTGGAGTTCTGA
Upstream 100 bases:
>100_bases GTTGACAAGTGCGATTCTCCTCTGCCACAAAGTAACCGATTAGTTACTGGCTTGGGAGGGCTGGTTCTCTCCCCTCACGG GCACCTCAGGGAGGAAGCGC
Downstream 100 bases:
>100_bases GAGATGGCAAGCATCAGTCTTCCCGTCGGCGGTCGGCTCCTTCCCTACGAACTCACCGGCCGGCCGGTGCCGTTGAAGGG GCGCGATGCGGCTGCCTTTC
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MPRLGIILHGVTGRMGYNQHLVRSVLAIRDQGGIMLKSGGRLEIDPIIVGRNRDKIEQLAKRHDIARWSTDLDAALADPN DQIFFDAGTTLMRAELIGRALDAGKHVYCEKPVSDDLRTAVKLARKARASGLKHGVVQDKLFLPGLQKLALLRDSGFFGK ILSVRGEFGYWVFEGDWGVPAQRPSWNYRKKDGGGIILDMLCHWRYVLDNLFGEVKAVSCLGATHISSRIDEQGRAYDCD TDDAAYATFELEGGVIAQINSSWTVRVRRDDLVTFQVDGTHGSAVAGLTKCWTQHRVNTPKPVWNPDQPQTIDFYETWDE VPDTQAFDNGFKAQWEMFLRHVAEDSPWPYGLEAGAKGVQLAELGLKSWAERRWLDVPELEF
Sequences:
>Translated_382_residues MPRLGIILHGVTGRMGYNQHLVRSVLAIRDQGGIMLKSGGRLEIDPIIVGRNRDKIEQLAKRHDIARWSTDLDAALADPN DQIFFDAGTTLMRAELIGRALDAGKHVYCEKPVSDDLRTAVKLARKARASGLKHGVVQDKLFLPGLQKLALLRDSGFFGK ILSVRGEFGYWVFEGDWGVPAQRPSWNYRKKDGGGIILDMLCHWRYVLDNLFGEVKAVSCLGATHISSRIDEQGRAYDCD TDDAAYATFELEGGVIAQINSSWTVRVRRDDLVTFQVDGTHGSAVAGLTKCWTQHRVNTPKPVWNPDQPQTIDFYETWDE VPDTQAFDNGFKAQWEMFLRHVAEDSPWPYGLEAGAKGVQLAELGLKSWAERRWLDVPELEF >Mature_381_residues PRLGIILHGVTGRMGYNQHLVRSVLAIRDQGGIMLKSGGRLEIDPIIVGRNRDKIEQLAKRHDIARWSTDLDAALADPND QIFFDAGTTLMRAELIGRALDAGKHVYCEKPVSDDLRTAVKLARKARASGLKHGVVQDKLFLPGLQKLALLRDSGFFGKI LSVRGEFGYWVFEGDWGVPAQRPSWNYRKKDGGGIILDMLCHWRYVLDNLFGEVKAVSCLGATHISSRIDEQGRAYDCDT DDAAYATFELEGGVIAQINSSWTVRVRRDDLVTFQVDGTHGSAVAGLTKCWTQHRVNTPKPVWNPDQPQTIDFYETWDEV PDTQAFDNGFKAQWEMFLRHVAEDSPWPYGLEAGAKGVQLAELGLKSWAERRWLDVPELEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 42894; Mature: 42763
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLGIILHGVTGRMGYNQHLVRSVLAIRDQGGIMLKSGGRLEIDPIIVGRNRDKIEQLA CCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEECCCHHHHHHHH KRHDIARWSTDLDAALADPNDQIFFDAGTTLMRAELIGRALDAGKHVYCEKPVSDDLRTA HHHHHHHHCCCCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH VKLARKARASGLKHGVVQDKLFLPGLQKLALLRDSGFFGKILSVRGEFGYWVFEGDWGVP HHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHEECCCCEEEEEECCCCCC AQRPSWNYRKKDGGGIILDMLCHWRYVLDNLFGEVKAVSCLGATHISSRIDEQGRAYDCD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC TDDAAYATFELEGGVIAQINSSWTVRVRRDDLVTFQVDGTHGSAVAGLTKCWTQHRVNTP CCCCEEEEEEECCCEEEEECCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCC KPVWNPDQPQTIDFYETWDEVPDTQAFDNGFKAQWEMFLRHVAEDSPWPYGLEAGAKGVQ CCCCCCCCCCEEHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH LAELGLKSWAERRWLDVPELEF HHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PRLGIILHGVTGRMGYNQHLVRSVLAIRDQGGIMLKSGGRLEIDPIIVGRNRDKIEQLA CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEECCCHHHHHHHH KRHDIARWSTDLDAALADPNDQIFFDAGTTLMRAELIGRALDAGKHVYCEKPVSDDLRTA HHHHHHHHCCCCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH VKLARKARASGLKHGVVQDKLFLPGLQKLALLRDSGFFGKILSVRGEFGYWVFEGDWGVP HHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHEECCCCEEEEEECCCCCC AQRPSWNYRKKDGGGIILDMLCHWRYVLDNLFGEVKAVSCLGATHISSRIDEQGRAYDCD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC TDDAAYATFELEGGVIAQINSSWTVRVRRDDLVTFQVDGTHGSAVAGLTKCWTQHRVNTP CCCCEEEEEEECCCEEEEECCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCC KPVWNPDQPQTIDFYETWDEVPDTQAFDNGFKAQWEMFLRHVAEDSPWPYGLEAGAKGVQ CCCCCCCCCCEEHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH LAELGLKSWAERRWLDVPELEF HHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]