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The map label for this gene is yccU [H]

Identifier: 150396089

GI number: 150396089

Start: 924507

End: 924941

Strand: Direct

Name: yccU [H]

Synonym: Smed_0866

Alternate gene names: 150396089

Gene position: 924507-924941 (Clockwise)

Preceding gene: 150396087

Following gene: 150396090

Centisome position: 24.45

GC content: 64.6

Gene sequence:

>435_bases
ATGAGCATGAACCACGACGCCTACCCGGATTACTATCTGGCCGACATCCTGCGCGAGACGAAGACCATTGCGCTCGTAGG
CGCCTCTCCGAAGGCGGAGCGGCCGAGCTATCGCGTCATGGCCTTCCTTCTGCGCAAGGGCTACCGCGTTATTCCGGTCA
ATCCCGGGCATGCGGGCGGCACCATCCTCGATCAACCGGTGGTGGGACGCCTCGCGGACATCGGGGAGTCGATCGACATG
GTGGACGTCTTCCGCGCAGCGAGCGCCCTGCCGGCCCTTGTGGACGAAATCCTGGCGCTGCCGTCGCCTCCCAAGGTCAT
CTGGGGACAACTATCCGTCCGCGACGACGTGGCAGCGGCCAAGGCCGAAGCCGCAGGCATCAAGGTCGTCATGGATCGCT
GCCCGGCCATCGAATATCCGCGCCTGATCGGATGA

Upstream 100 bases:

>100_bases
TTGGATCGAACGCGGTTGAGGGAGAGATTCAGTAACTTGAAGCGTTACAGCCCCCTTTGCGCGTCCGCTTGGACGCGCTG
CGATGTAGTAGGTCTGGACG

Downstream 100 bases:

>100_bases
GCATCAGATTATTCAAGTGAGTGAGGGAGAAACGAAGATGAATGGCGGACCCGGTTTCAGCACGCTTGCAATTCATGCCG
GAGCCCAGCCGGACCCGACG

Product: CoA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSMNHDAYPDYYLADILRETKTIALVGASPKAERPSYRVMAFLLRKGYRVIPVNPGHAGGTILDQPVVGRLADIGESIDM
VDVFRAASALPALVDEILALPSPPKVIWGQLSVRDDVAAAKAEAAGIKVVMDRCPAIEYPRLIG

Sequences:

>Translated_144_residues
MSMNHDAYPDYYLADILRETKTIALVGASPKAERPSYRVMAFLLRKGYRVIPVNPGHAGGTILDQPVVGRLADIGESIDM
VDVFRAASALPALVDEILALPSPPKVIWGQLSVRDDVAAAKAEAAGIKVVMDRCPAIEYPRLIG
>Mature_143_residues
SMNHDAYPDYYLADILRETKTIALVGASPKAERPSYRVMAFLLRKGYRVIPVNPGHAGGTILDQPVVGRLADIGESIDMV
DVFRAASALPALVDEILALPSPPKVIWGQLSVRDDVAAAKAEAAGIKVVMDRCPAIEYPRLIG

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081810, Length=130, Percent_Identity=55.3846153846154, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 15541; Mature: 15410

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMNHDAYPDYYLADILRETKTIALVGASPKAERPSYRVMAFLLRKGYRVIPVNPGHAGG
CCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCC
TILDQPVVGRLADIGESIDMVDVFRAASALPALVDEILALPSPPKVIWGQLSVRDDVAAA
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
KAEAAGIKVVMDRCPAIEYPRLIG
HHHHCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SMNHDAYPDYYLADILRETKTIALVGASPKAERPSYRVMAFLLRKGYRVIPVNPGHAGG
CCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCC
TILDQPVVGRLADIGESIDMVDVFRAASALPALVDEILALPSPPKVIWGQLSVRDDVAAA
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
KAEAAGIKVVMDRCPAIEYPRLIG
HHHHCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9868784 [H]