| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is exoP [H]
Identifier: 150396077
GI number: 150396077
Start: 912695
End: 914824
Strand: Direct
Name: exoP [H]
Synonym: Smed_0854
Alternate gene names: 150396077
Gene position: 912695-914824 (Clockwise)
Preceding gene: 150396072
Following gene: 150396081
Centisome position: 24.13
GC content: 61.78
Gene sequence:
>2130_bases ATGTCGGGCGGGCAGCAGGATGTAGATATCGACCTCGGCGGGCTCTTCCGCGCCATCTGGCAACGGCGCGTGCGCGTCCT GCTCGTCACTGTTGGGGCCGCTGCCGTCAGCTTCGCCGCCGCCAGGATGGTCGCTCCCGACTATCAAGGCGAGACCCGCG TTTTGATCGAATCGCGTGAGCCCGAGTTCAGCGGCAGCAACCAAGTCTCGCAGAGCGGATCCGACCGAATGTTCGATGAA TCGGGCATTCTCAGCCAGGTGCAGGTCCTGCGCTCGGCGGACCTGATCAAGCAGGTCGCGCGCAACATGAAACTGCACGA ACGCGAAGAATTCGATCCCTCCGCCCGGCCTTCCGCCGCCTCCGATCTCCTGGTGATGCTGGGTCTCAAGAAGAATCCCC TCGATCTTCCGCCCGAGGAACGGGTCCTCAAAGAGTTCAATGAGAAGCTGCAGGTCTACCAGGTCGAAAAGTCGCGTGTG ATCGCCATCGCCTTCACTTCGAAAGATCCGAAGCTTGCGGCCGCTATTCCGAACGAAATGGCCGATGTCTATCGCTCCCT GCAGAGCGGCGCCAAGCTCGACTCCAACTCCGATGCAAGCCGGTGGTTGGAACCGGAAATCGCCAACCTGCGCGAGAAGG TGCGCGAGGCGGAGGCCAAGGTTGCCATTTACCGCGCGGAATCGGGTCTGCTTCCGACCGGAGAGACGCAGAATTTTGCT ACACGCCAGCTGACCGACATTTCGACGGAGCTCGCGCGGGTGCGCGCGGAGCGTGCCAATGCGGCTGCCCGCGCCGAGGG TATGCGGACGGCGCTCGCGGACGGTCGTCCGGCCGACACCCTTGCCGACATCGTCGGTTCGCCGATGATACAGCGTCTCA AGGAAAGCCGCTCCAATGTTCAGTCGCAGATCGCCGATCTGTCGCCGGCGCTGCTCGACGGTCATCCGCGCTTGAAGGGG CTCAAGTCGCAGCTGGAGGGGATCGAAGCGCAGATCCGGTCGGAGACGCGGAAGATTCTCGCGAGCCTCGAAAACGAAGC GAAGGTCGGGCAATTGCGCGAACAGCAGCTCGTCCAGCAGCTGAACACGCTCAAGGCGCAATCGGCGCAGGCGGGCGAGG AGGAAGTGGGACTTCGTGCGCTCGAGCGCGAGGCGGCGGCACAGCGCCAGTTGCTTGAAACTTATCTTGCCCGTTATCGC GAGGCCACCTCGCGCACTGTGGCGAATGCAACTCCGGCCGATGCACGCGTGATTTCGCGCGCCGTCATCCCCACCAGCCA GAGCTTCCCCAAGGTGCTGCCGATAACGATCGTCGCAGCCTTTGCCAGCTTCCTCGTCAGTTGCGTCGTTATCATGCTAA GGGAGCTTTTCAGCGGTCGCGCGCTGAGGCCTGTTTCCATACCCGAAGCGTCGACCGCAGGTCAGCCCGCAGGAGAACCG CCAGTTCCGGTTCTGGTCCAGCAGATTCCCGCGCCAATCCTCGTTTCGGCGATATCTGCGGATGAGGAAGAAGGCCGGAG CGAAAACGAAGCACCGAACCATGATTTTTCAATGGAGTCGGTTGCCGAACATATTCGAGCCAAAGGCGTGCGGGTTGCCG TCTCGGTATCGCCGGGCGGCGACGAAGGATCCACTGCGACCGTAATGCTGGCGCGCTTTCTGGCCGAAGAGGGGCAGAAA GTCGTTCTGATCGACCTTTCCGGTTCAGCCTGCCCGACGCGGCTCATGGCGCATTCGCAGGATCTTGCCGGAGTCACGAA TTTGCTCATGGGGGAGGTCGCCTTTTCCGAGGCGATTCACTCAGACAGCTTGTCAGAAGCACATATAATACCCTGTGGCG ACGCCGACCCGCATGCGGCGATGCGCGGTATCGACCGGCTGCGGATCATCGTCGATGCGCTCTCCAGTGCCTACGACCTC GTCTTGATTGAATGCGGTTCGGCTGACGCAGACGCGGTCGCCAAGTTACGACACGAGGGTACCGAGATCATCCTGTCGGC ACCGTCGATCAGCAACGATCAGATTGTCGAGATGTTGATGCGTTTCGGCGAAGCGGGATATCGCGATGTCGTGCTTATGA CCGGGCAGGGGCAGAAAGGTCCTGATTTTCCCGACCGCCGCGCGGCGTAG
Upstream 100 bases:
>100_bases CCCTTGTGCGTGACGCGGTGCGGTTCCAGGGAAATTAACGGTTGGGTTACCATGTTCGTTTACCTTCTCGCCAACTTTGA AAGCTTTGGGGTGCAGGGGT
Downstream 100 bases:
>100_bases AGGGCTTTCCGGGAACTGTGCTGCGGCTTCCCAGTAGGAGGCATTGGCGCCAGGTCTACGGTTCATCTGCGCTTGCAGCC GACATCTGCCGTAACCGTCG
Product: exopolysaccharide transport protein family
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 709; Mature: 708
Protein sequence:
>709_residues MSGGQQDVDIDLGGLFRAIWQRRVRVLLVTVGAAAVSFAAARMVAPDYQGETRVLIESREPEFSGSNQVSQSGSDRMFDE SGILSQVQVLRSADLIKQVARNMKLHEREEFDPSARPSAASDLLVMLGLKKNPLDLPPEERVLKEFNEKLQVYQVEKSRV IAIAFTSKDPKLAAAIPNEMADVYRSLQSGAKLDSNSDASRWLEPEIANLREKVREAEAKVAIYRAESGLLPTGETQNFA TRQLTDISTELARVRAERANAAARAEGMRTALADGRPADTLADIVGSPMIQRLKESRSNVQSQIADLSPALLDGHPRLKG LKSQLEGIEAQIRSETRKILASLENEAKVGQLREQQLVQQLNTLKAQSAQAGEEEVGLRALEREAAAQRQLLETYLARYR EATSRTVANATPADARVISRAVIPTSQSFPKVLPITIVAAFASFLVSCVVIMLRELFSGRALRPVSIPEASTAGQPAGEP PVPVLVQQIPAPILVSAISADEEEGRSENEAPNHDFSMESVAEHIRAKGVRVAVSVSPGGDEGSTATVMLARFLAEEGQK VVLIDLSGSACPTRLMAHSQDLAGVTNLLMGEVAFSEAIHSDSLSEAHIIPCGDADPHAAMRGIDRLRIIVDALSSAYDL VLIECGSADADAVAKLRHEGTEIILSAPSISNDQIVEMLMRFGEAGYRDVVLMTGQGQKGPDFPDRRAA
Sequences:
>Translated_709_residues MSGGQQDVDIDLGGLFRAIWQRRVRVLLVTVGAAAVSFAAARMVAPDYQGETRVLIESREPEFSGSNQVSQSGSDRMFDE SGILSQVQVLRSADLIKQVARNMKLHEREEFDPSARPSAASDLLVMLGLKKNPLDLPPEERVLKEFNEKLQVYQVEKSRV IAIAFTSKDPKLAAAIPNEMADVYRSLQSGAKLDSNSDASRWLEPEIANLREKVREAEAKVAIYRAESGLLPTGETQNFA TRQLTDISTELARVRAERANAAARAEGMRTALADGRPADTLADIVGSPMIQRLKESRSNVQSQIADLSPALLDGHPRLKG LKSQLEGIEAQIRSETRKILASLENEAKVGQLREQQLVQQLNTLKAQSAQAGEEEVGLRALEREAAAQRQLLETYLARYR EATSRTVANATPADARVISRAVIPTSQSFPKVLPITIVAAFASFLVSCVVIMLRELFSGRALRPVSIPEASTAGQPAGEP PVPVLVQQIPAPILVSAISADEEEGRSENEAPNHDFSMESVAEHIRAKGVRVAVSVSPGGDEGSTATVMLARFLAEEGQK VVLIDLSGSACPTRLMAHSQDLAGVTNLLMGEVAFSEAIHSDSLSEAHIIPCGDADPHAAMRGIDRLRIIVDALSSAYDL VLIECGSADADAVAKLRHEGTEIILSAPSISNDQIVEMLMRFGEAGYRDVVLMTGQGQKGPDFPDRRAA >Mature_708_residues SGGQQDVDIDLGGLFRAIWQRRVRVLLVTVGAAAVSFAAARMVAPDYQGETRVLIESREPEFSGSNQVSQSGSDRMFDES GILSQVQVLRSADLIKQVARNMKLHEREEFDPSARPSAASDLLVMLGLKKNPLDLPPEERVLKEFNEKLQVYQVEKSRVI AIAFTSKDPKLAAAIPNEMADVYRSLQSGAKLDSNSDASRWLEPEIANLREKVREAEAKVAIYRAESGLLPTGETQNFAT RQLTDISTELARVRAERANAAARAEGMRTALADGRPADTLADIVGSPMIQRLKESRSNVQSQIADLSPALLDGHPRLKGL KSQLEGIEAQIRSETRKILASLENEAKVGQLREQQLVQQLNTLKAQSAQAGEEEVGLRALEREAAAQRQLLETYLARYRE ATSRTVANATPADARVISRAVIPTSQSFPKVLPITIVAAFASFLVSCVVIMLRELFSGRALRPVSIPEASTAGQPAGEPP VPVLVQQIPAPILVSAISADEEEGRSENEAPNHDFSMESVAEHIRAKGVRVAVSVSPGGDEGSTATVMLARFLAEEGQKV VLIDLSGSACPTRLMAHSQDLAGVTNLLMGEVAFSEAIHSDSLSEAHIIPCGDADPHAAMRGIDRLRIIVDALSSAYDLV LIECGSADADAVAKLRHEGTEIILSAPSISNDQIVEMLMRFGEAGYRDVVLMTGQGQKGPDFPDRRAA
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.solanacearum epsB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 76618; Mature: 76487
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGQQDVDIDLGGLFRAIWQRRVRVLLVTVGAAAVSFAAARMVAPDYQGETRVLIESRE CCCCCCCCCCCHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCC PEFSGSNQVSQSGSDRMFDESGILSQVQVLRSADLIKQVARNMKLHEREEFDPSARPSAA CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHH SDLLVMLGLKKNPLDLPPEERVLKEFNEKLQVYQVEKSRVIAIAFTSKDPKLAAAIPNEM HHHHHEECCCCCCCCCCCHHHHHHHHHHHHEEEEECCCEEEEEEEECCCCCEEHHCCHHH ADVYRSLQSGAKLDSNSDASRWLEPEIANLREKVREAEAKVAIYRAESGLLPTGETQNFA HHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHH TRQLTDISTELARVRAERANAAARAEGMRTALADGRPADTLADIVGSPMIQRLKESRSNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHH QSQIADLSPALLDGHPRLKGLKSQLEGIEAQIRSETRKILASLENEAKVGQLREQQLVQQ HHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNTLKAQSAQAGEEEVGLRALEREAAAQRQLLETYLARYREATSRTVANATPADARVISR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AVIPTSQSFPKVLPITIVAAFASFLVSCVVIMLRELFSGRALRPVSIPEASTAGQPAGEP HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PVPVLVQQIPAPILVSAISADEEEGRSENEAPNHDFSMESVAEHIRAKGVRVAVSVSPGG CHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCC DEGSTATVMLARFLAEEGQKVVLIDLSGSACPTRLMAHSQDLAGVTNLLMGEVAFSEAIH CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SDSLSEAHIIPCGDADPHAAMRGIDRLRIIVDALSSAYDLVLIECGSADADAVAKLRHEG CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCC TEIILSAPSISNDQIVEMLMRFGEAGYRDVVLMTGQGQKGPDFPDRRAA CEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SGGQQDVDIDLGGLFRAIWQRRVRVLLVTVGAAAVSFAAARMVAPDYQGETRVLIESRE CCCCCCCCCCHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCC PEFSGSNQVSQSGSDRMFDESGILSQVQVLRSADLIKQVARNMKLHEREEFDPSARPSAA CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHH SDLLVMLGLKKNPLDLPPEERVLKEFNEKLQVYQVEKSRVIAIAFTSKDPKLAAAIPNEM HHHHHEECCCCCCCCCCCHHHHHHHHHHHHEEEEECCCEEEEEEEECCCCCEEHHCCHHH ADVYRSLQSGAKLDSNSDASRWLEPEIANLREKVREAEAKVAIYRAESGLLPTGETQNFA HHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHH TRQLTDISTELARVRAERANAAARAEGMRTALADGRPADTLADIVGSPMIQRLKESRSNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHH QSQIADLSPALLDGHPRLKGLKSQLEGIEAQIRSETRKILASLENEAKVGQLREQQLVQQ HHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNTLKAQSAQAGEEEVGLRALEREAAAQRQLLETYLARYREATSRTVANATPADARVISR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AVIPTSQSFPKVLPITIVAAFASFLVSCVVIMLRELFSGRALRPVSIPEASTAGQPAGEP HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PVPVLVQQIPAPILVSAISADEEEGRSENEAPNHDFSMESVAEHIRAKGVRVAVSVSPGG CHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCC DEGSTATVMLARFLAEEGQKVVLIDLSGSACPTRLMAHSQDLAGVTNLLMGEVAFSEAIH CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SDSLSEAHIIPCGDADPHAAMRGIDRLRIIVDALSSAYDLVLIECGSADADAVAKLRHEG CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCC TEIILSAPSISNDQIVEMLMRFGEAGYRDVVLMTGQGQKGPDFPDRRAA CEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]