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The map label for this gene is 150395949

Identifier: 150395949

GI number: 150395949

Start: 778954

End: 780300

Strand: Direct

Name: 150395949

Synonym: Smed_0725

Alternate gene names: NA

Gene position: 778954-780300 (Clockwise)

Preceding gene: 150395948

Following gene: 150395955

Centisome position: 20.6

GC content: 64.44

Gene sequence:

>1347_bases
ATGTCGAGACCACGCGAGCGGCGCGAGACGGGGGAGCAGGATCTGTTCCGCTCCCGGCTGGATCAGATCATCAACATGAG
GCACGAACTGGTGCGGCTGGCGCAGGCGATCGACTGGCCGCTGTTGGAGGGCCGCTTCGGCGAGGTCTATTGCGATGGCC
CCGGCATGCCGCCGCTGCCGACGCGGCTGATGGCGGGGCTGGCGATCCTTAAGCACACGTTCGACCTGTCGGACGAGGAG
TTGTGTGCCCGCTGGGTGGAGAACCCCTATTTCCAGTATCTCTGCGGCGAGGAATTCTTCCGCCACGACCTGCCCTTCGA
CCGCTCGTCGATGACGCGCTGGCGGGCGCGCATGGGCGAGGAGCGACTGACGGCGCTGTTGCAGGAAAGCCTGGCGGTGG
CGGTCAAGACCGGGGCGATGCAGCCGCAGGATACGCGCCGGGTAATCGTCGACACCACCGTGCAGCCGAAGAACGTGATG
TTTCCGACCGACGCGAAACTCCTCCATCGGGCGCGCGAGCGGCTCGTCCGCCTAGCCAAAAAGGCAGGGTTGACCTTGCG
GCAATCCTACATACGGGTCGGCAAGCTGGCGCTGATCAAGCACCAGCGCTACGCCCACGCCAAACAGTTCAAACGGGCCA
ACAAGGCGTTGCGGACGCTCAGGACCTATCTCGGCCGCACCATTCGCGACATTCGCCGCCAGATCGGCGATGATGAGAAG
CTGCGGTCGATCTTCCTGTGGCCGCTGCACCAGGCCTCGACGGTTCTGGAGCAGAGGCAACGCCAGCGCGGCCGCAAGAT
CTACAGCCTGCATGCGCCGGAGGTCGAATGCATCGGCAAGGGCAAGGCGCACCGGCCGTACGAGTTCGGCGTCAAGGTCT
CGGTCGCCACCACGCTGAAACGTTCGAAGGGTGGCCAGTTCGCCCTGCATGCGAAAGCCATGCCCGGCAATCCCTATGAC
GGCCATACGCTGGCAACGGTGATCCCGGAGATGGAGAAAACCGTCGGCAATGAGATCGCCCGCATCCTCGCCGACGCCGG
CTACCGCGGCCACAATGCCCCCGCCAGCCACCGGTTCCGGATCTTCACCAGCGGTCAGAAACGCCGCGTCACGCTAGCGA
TCAAGCGCGAGATGCGGCGGCGTTCGGCCATCGAGCCGGTCATCGGTCATCTCAAGGCAGAGCACCGCATGGGCCGCAAC
TACCTCGCAGGCCAACACGGTGACGCCATCAACGCTGTGTTGGCAGCAGCCGGCTACAACTTCTCGCTCCTCCTCAACTG
GTTGAGGCAATTTTTTTGGCTGCTCTTCGCCTGGGTGCACGCCGCAGCCAATCCGAACGCTGCTTAG

Upstream 100 bases:

>100_bases
CTCTGGTTAAGAACGGTTTTCCTGCAATTTGATTTTGCGGTTTTCTGGTCCGGCGCGGCGTGATTCACTTGTTTTAGCGG
CGGTGAATCGAGGAGCGGCG

Downstream 100 bases:

>100_bases
CGCCGATCATTGTTCACGGTCGACGAACATCCGGGGGAGTGGAGCGCCGCGGGTCTATTCCGGCATGCGGTAATCGACGA
TCTTCTTTTCCCGAACGATG

Product: transposase IS4 family protein

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSRPRERRETGEQDLFRSRLDQIINMRHELVRLAQAIDWPLLEGRFGEVYCDGPGMPPLPTRLMAGLAILKHTFDLSDEE
LCARWVENPYFQYLCGEEFFRHDLPFDRSSMTRWRARMGEERLTALLQESLAVAVKTGAMQPQDTRRVIVDTTVQPKNVM
FPTDAKLLHRARERLVRLAKKAGLTLRQSYIRVGKLALIKHQRYAHAKQFKRANKALRTLRTYLGRTIRDIRRQIGDDEK
LRSIFLWPLHQASTVLEQRQRQRGRKIYSLHAPEVECIGKGKAHRPYEFGVKVSVATTLKRSKGGQFALHAKAMPGNPYD
GHTLATVIPEMEKTVGNEIARILADAGYRGHNAPASHRFRIFTSGQKRRVTLAIKREMRRRSAIEPVIGHLKAEHRMGRN
YLAGQHGDAINAVLAAAGYNFSLLLNWLRQFFWLLFAWVHAAANPNAA

Sequences:

>Translated_448_residues
MSRPRERRETGEQDLFRSRLDQIINMRHELVRLAQAIDWPLLEGRFGEVYCDGPGMPPLPTRLMAGLAILKHTFDLSDEE
LCARWVENPYFQYLCGEEFFRHDLPFDRSSMTRWRARMGEERLTALLQESLAVAVKTGAMQPQDTRRVIVDTTVQPKNVM
FPTDAKLLHRARERLVRLAKKAGLTLRQSYIRVGKLALIKHQRYAHAKQFKRANKALRTLRTYLGRTIRDIRRQIGDDEK
LRSIFLWPLHQASTVLEQRQRQRGRKIYSLHAPEVECIGKGKAHRPYEFGVKVSVATTLKRSKGGQFALHAKAMPGNPYD
GHTLATVIPEMEKTVGNEIARILADAGYRGHNAPASHRFRIFTSGQKRRVTLAIKREMRRRSAIEPVIGHLKAEHRMGRN
YLAGQHGDAINAVLAAAGYNFSLLLNWLRQFFWLLFAWVHAAANPNAA
>Mature_447_residues
SRPRERRETGEQDLFRSRLDQIINMRHELVRLAQAIDWPLLEGRFGEVYCDGPGMPPLPTRLMAGLAILKHTFDLSDEEL
CARWVENPYFQYLCGEEFFRHDLPFDRSSMTRWRARMGEERLTALLQESLAVAVKTGAMQPQDTRRVIVDTTVQPKNVMF
PTDAKLLHRARERLVRLAKKAGLTLRQSYIRVGKLALIKHQRYAHAKQFKRANKALRTLRTYLGRTIRDIRRQIGDDEKL
RSIFLWPLHQASTVLEQRQRQRGRKIYSLHAPEVECIGKGKAHRPYEFGVKVSVATTLKRSKGGQFALHAKAMPGNPYDG
HTLATVIPEMEKTVGNEIARILADAGYRGHNAPASHRFRIFTSGQKRRVTLAIKREMRRRSAIEPVIGHLKAEHRMGRNY
LAGQHGDAINAVLAAAGYNFSLLLNWLRQFFWLLFAWVHAAANPNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772 [H]

EC number: NA

Molecular weight: Translated: 51434; Mature: 51303

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPRERRETGEQDLFRSRLDQIINMRHELVRLAQAIDWPLLEGRFGEVYCDGPGMPPLP
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHH
TRLMAGLAILKHTFDLSDEELCARWVENPYFQYLCGEEFFRHDLPFDRSSMTRWRARMGE
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH
ERLTALLQESLAVAVKTGAMQPQDTRRVIVDTTVQPKNVMFPTDAKLLHRARERLVRLAK
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KAGLTLRQSYIRVGKLALIKHQRYAHAKQFKRANKALRTLRTYLGRTIRDIRRQIGDDEK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LRSIFLWPLHQASTVLEQRQRQRGRKIYSLHAPEVECIGKGKAHRPYEFGVKVSVATTLK
HHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCHHCCCCCCCCCCHHCCEEEEHHHHHH
RSKGGQFALHAKAMPGNPYDGHTLATVIPEMEKTVGNEIARILADAGYRGHNAPASHRFR
HCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
IFTSGQKRRVTLAIKREMRRRSAIEPVIGHLKAEHRMGRNYLAGQHGDAINAVLAAAGYN
EEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHCCCC
FSLLLNWLRQFFWLLFAWVHAAANPNAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRPRERRETGEQDLFRSRLDQIINMRHELVRLAQAIDWPLLEGRFGEVYCDGPGMPPLP
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHH
TRLMAGLAILKHTFDLSDEELCARWVENPYFQYLCGEEFFRHDLPFDRSSMTRWRARMGE
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH
ERLTALLQESLAVAVKTGAMQPQDTRRVIVDTTVQPKNVMFPTDAKLLHRARERLVRLAK
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KAGLTLRQSYIRVGKLALIKHQRYAHAKQFKRANKALRTLRTYLGRTIRDIRRQIGDDEK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LRSIFLWPLHQASTVLEQRQRQRGRKIYSLHAPEVECIGKGKAHRPYEFGVKVSVATTLK
HHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCHHCCCCCCCCCCHHCCEEEEHHHHHH
RSKGGQFALHAKAMPGNPYDGHTLATVIPEMEKTVGNEIARILADAGYRGHNAPASHRFR
HCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
IFTSGQKRRVTLAIKREMRRRSAIEPVIGHLKAEHRMGRNYLAGQHGDAINAVLAAAGYN
EEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHCCCC
FSLLLNWLRQFFWLLFAWVHAAANPNAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8429568 [H]