Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is pssA [H]

Identifier: 150395948

GI number: 150395948

Start: 777792

End: 778679

Strand: Direct

Name: pssA [H]

Synonym: Smed_0724

Alternate gene names: 150395948

Gene position: 777792-778679 (Clockwise)

Preceding gene: 150395947

Following gene: 150395949

Centisome position: 20.57

GC content: 63.51

Gene sequence:

>888_bases
ATGGAAGAACCCCGCCACGAAAAATCCGCAGGGAACCAGGAAGTCGCCGCTGAGCATGCCCAGGCGGCTGGATCGCAGGA
TACCGGTTCGCACGACAAGGCGCGAGGGCCGCGATTGCGCGAGATCCCTCTACGGCTGATGGTCCCCAACATGATCACCG
TTCTGGCGATCTGTGCGGGTCTTTCGGGCATCCGCCTGGCTTTCGAGAATCGTTTCGAGCTCGCGGTTGCGATGGTCCTG
CTGGCCGCCTTCCTCGACGGCATAGACGGACGCATCGCGCGTCTCCTGAAGGCGACGTCGAGCTTCGGGGTGCAGATGGA
CTCGCTTGCCGACATCATCAATTTCGGTGTTGCGCCCGCGCTCGTCCTCTACGTCTTTCTGCTGGACCAAGCCCGTTCCG
TCGGGTGGATCGCGGCGTTGATCTATGCCATTGCCGCGGGCCTCAGACTCGCGCGTTTCAATGTGATGGCGGAGCGCCAG
GTCAAGGCGAGGTGGCAGTCGGAATATTTCGTCGGCGTTCCTGCGCCGGCCGGCGCGATGCTGGTGCTGCTGCCGGTCTA
TCTTGGCCTGCTGGGCCTTGCGCCGGACCGGACCTTTGCGCTGATCGCATCGGTCTATACCGTCCTGATCGCCTTCCTGA
TGGTCAGCCGTCTGCCCGTCTGGTCGGGCAAGTCGGAAAACCGCGTGCGACGCGACCTGGTGCTGCCCGTCATCCTGGTC
GTCGTCCTCTATGTAGCGACGCTGATGACCTATACATGGGAGACGATGGCAGTGACGGCGGTCGCCTATCTGGTGACCTT
GCCCTTTGGCGCCCGTTCCTGGCAGCGCAAATACGGCGACTGGCCTTCCGCCCACGGGAACGATGGCCTGCCGGGGGACA
GCGAGTAG

Upstream 100 bases:

>100_bases
TGTGACGGTGGGCCAGACAGCCACCGCCGGCGAGACAGTGATCGCAGAATTCGGATCGGCGAAGGGGCCGGTCATCAGCC
GCCGCGCGTGAGGACAGGTC

Downstream 100 bases:

>100_bases
TTGCAAGGATATCCATTGCGAATGCCCGTATCCCGCCGCCGCGTCTTGGCGGGGAGAAGGGACAAGCCGCTGACCCGCGT
TCCCCCTCGAACATCGTCGT

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAGLSGIRLAFENRFELAVAMVL
LAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPALVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQ
VKARWQSEYFVGVPAPAGAMLVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV
VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE

Sequences:

>Translated_295_residues
MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAGLSGIRLAFENRFELAVAMVL
LAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPALVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQ
VKARWQSEYFVGVPAPAGAMLVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV
VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE
>Mature_295_residues
MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAGLSGIRLAFENRFELAVAMVL
LAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPALVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQ
VKARWQSEYFVGVPAPAGAMLVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV
VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=123, Percent_Identity=38.2113821138211, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 32125; Mature: 32125

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAG
CCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHC
LSGIRLAFENRFELAVAMVLLAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHH
LVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQVKARWQSEYFVGVPAPAGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHH
LVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAG
CCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHC
LSGIRLAFENRFELAVAMVLLAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHH
LVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQVKARWQSEYFVGVPAPAGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHH
LVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]