Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is pssA [H]
Identifier: 150395948
GI number: 150395948
Start: 777792
End: 778679
Strand: Direct
Name: pssA [H]
Synonym: Smed_0724
Alternate gene names: 150395948
Gene position: 777792-778679 (Clockwise)
Preceding gene: 150395947
Following gene: 150395949
Centisome position: 20.57
GC content: 63.51
Gene sequence:
>888_bases ATGGAAGAACCCCGCCACGAAAAATCCGCAGGGAACCAGGAAGTCGCCGCTGAGCATGCCCAGGCGGCTGGATCGCAGGA TACCGGTTCGCACGACAAGGCGCGAGGGCCGCGATTGCGCGAGATCCCTCTACGGCTGATGGTCCCCAACATGATCACCG TTCTGGCGATCTGTGCGGGTCTTTCGGGCATCCGCCTGGCTTTCGAGAATCGTTTCGAGCTCGCGGTTGCGATGGTCCTG CTGGCCGCCTTCCTCGACGGCATAGACGGACGCATCGCGCGTCTCCTGAAGGCGACGTCGAGCTTCGGGGTGCAGATGGA CTCGCTTGCCGACATCATCAATTTCGGTGTTGCGCCCGCGCTCGTCCTCTACGTCTTTCTGCTGGACCAAGCCCGTTCCG TCGGGTGGATCGCGGCGTTGATCTATGCCATTGCCGCGGGCCTCAGACTCGCGCGTTTCAATGTGATGGCGGAGCGCCAG GTCAAGGCGAGGTGGCAGTCGGAATATTTCGTCGGCGTTCCTGCGCCGGCCGGCGCGATGCTGGTGCTGCTGCCGGTCTA TCTTGGCCTGCTGGGCCTTGCGCCGGACCGGACCTTTGCGCTGATCGCATCGGTCTATACCGTCCTGATCGCCTTCCTGA TGGTCAGCCGTCTGCCCGTCTGGTCGGGCAAGTCGGAAAACCGCGTGCGACGCGACCTGGTGCTGCCCGTCATCCTGGTC GTCGTCCTCTATGTAGCGACGCTGATGACCTATACATGGGAGACGATGGCAGTGACGGCGGTCGCCTATCTGGTGACCTT GCCCTTTGGCGCCCGTTCCTGGCAGCGCAAATACGGCGACTGGCCTTCCGCCCACGGGAACGATGGCCTGCCGGGGGACA GCGAGTAG
Upstream 100 bases:
>100_bases TGTGACGGTGGGCCAGACAGCCACCGCCGGCGAGACAGTGATCGCAGAATTCGGATCGGCGAAGGGGCCGGTCATCAGCC GCCGCGCGTGAGGACAGGTC
Downstream 100 bases:
>100_bases TTGCAAGGATATCCATTGCGAATGCCCGTATCCCGCCGCCGCGTCTTGGCGGGGAGAAGGGACAAGCCGCTGACCCGCGT TCCCCCTCGAACATCGTCGT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAGLSGIRLAFENRFELAVAMVL LAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPALVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQ VKARWQSEYFVGVPAPAGAMLVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE
Sequences:
>Translated_295_residues MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAGLSGIRLAFENRFELAVAMVL LAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPALVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQ VKARWQSEYFVGVPAPAGAMLVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE >Mature_295_residues MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAGLSGIRLAFENRFELAVAMVL LAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPALVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQ VKARWQSEYFVGVPAPAGAMLVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=123, Percent_Identity=38.2113821138211, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 32125; Mature: 32125
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAG CCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHC LSGIRLAFENRFELAVAMVLLAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHH LVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQVKARWQSEYFVGVPAPAGAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHH LVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEEPRHEKSAGNQEVAAEHAQAAGSQDTGSHDKARGPRLREIPLRLMVPNMITVLAICAG CCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHC LSGIRLAFENRFELAVAMVLLAAFLDGIDGRIARLLKATSSFGVQMDSLADIINFGVAPA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHH LVLYVFLLDQARSVGWIAALIYAIAAGLRLARFNVMAERQVKARWQSEYFVGVPAPAGAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHH LVLLPVYLGLLGLAPDRTFALIASVYTVLIAFLMVSRLPVWSGKSENRVRRDLVLPVILV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH VVLYVATLMTYTWETMAVTAVAYLVTLPFGARSWQRKYGDWPSAHGNDGLPGDSE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]