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The map label for this gene is yoqW [H]

Identifier: 150395935

GI number: 150395935

Start: 764103

End: 764873

Strand: Direct

Name: yoqW [H]

Synonym: Smed_0711

Alternate gene names: 150395935

Gene position: 764103-764873 (Clockwise)

Preceding gene: 150395926

Following gene: 150395937

Centisome position: 20.2

GC content: 63.81

Gene sequence:

>771_bases
ATGTGCGGACGTTTTGCGCTTACGGCGACACCGGAGGAATTGCTGGAGCTGTTCGGCCTCCTGGAGGCCGAGGGCTTTCC
CGCGCGCTTCAATATCGCGCCGACGCAGCCGATCATCGTAGTCGTCGCATCCGAACGGGCAGAGCCCGGCAGTAATCTGC
CGGAGCGCAAGGCTCTGCTCGTCCGCTGGGGTTTTACGCCCGGCTGGGTGAAGGACCCGCGCAAGTTTCCACTGCTGATC
AATGCGCGGGCCGAGACAGCGATCGAGAAGGCGGCATTTCGCGCGGCGATGCGCCACCGCCGCGTTTTGGTGCCGGCTTC
CGGCTTCTACGAGTGGCAGCGCCCCGCCAAAGGCAGCCGGGATGCCGCGCAAGCGTTTTGGGTGCGGCCCAGAAAGGGCG
GGATCGTTGCCCTCGCCGGACTTATGGAGACATGGTCTTCCGCTGACGGTTCCGAAGTCGACACCGCAGCGATCCTGACG
ACGGGCGCGAACAGGGCCGTCAGCCACATCCATGACCGAATGCCGGTCGTGATCCAGCCGGAGGACTTTTCCCGTTGGCT
CGATTGCAAGAGCCAGGAGCCGCGCGACGTCGCCGATCTCATGGTGCCTGCGGCGGAAGATTACTTCGAGGCAATCCCGA
TTTCGGAGAAGGTGAACAAGGTCACCAATACCGGGCCGGACCTCCAGGATGAAGTCACGCCCGCTGCGCCAATCCCGAAG
AAAAGGCGCGCCGACGACCGGGATGATGGCGGACAGATGTCGCTGTTCTAA

Upstream 100 bases:

>100_bases
GAGAATGGCGGAGGAGGCGCGCTGGGGTTGTTCTGTCATCATGGAATCGAAATTCACCTCGGTCGTTGACCCATACTACG
CGAAGTGCCACACCGATGTC

Downstream 100 bases:

>100_bases
GCCAACCGCTGCTCCTCATCCGCCTCGGTTCTAGGTATTCAAGCGGAACGCTTCGCGATCTTCTTGTCAACCGGCTTCGC
CCTGATTTGCAGGGCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MCGRFALTATPEELLELFGLLEAEGFPARFNIAPTQPIIVVVASERAEPGSNLPERKALLVRWGFTPGWVKDPRKFPLLI
NARAETAIEKAAFRAAMRHRRVLVPASGFYEWQRPAKGSRDAAQAFWVRPRKGGIVALAGLMETWSSADGSEVDTAAILT
TGANRAVSHIHDRMPVVIQPEDFSRWLDCKSQEPRDVADLMVPAAEDYFEAIPISEKVNKVTNTGPDLQDEVTPAAPIPK
KRRADDRDDGGQMSLF

Sequences:

>Translated_256_residues
MCGRFALTATPEELLELFGLLEAEGFPARFNIAPTQPIIVVVASERAEPGSNLPERKALLVRWGFTPGWVKDPRKFPLLI
NARAETAIEKAAFRAAMRHRRVLVPASGFYEWQRPAKGSRDAAQAFWVRPRKGGIVALAGLMETWSSADGSEVDTAAILT
TGANRAVSHIHDRMPVVIQPEDFSRWLDCKSQEPRDVADLMVPAAEDYFEAIPISEKVNKVTNTGPDLQDEVTPAAPIPK
KRRADDRDDGGQMSLF
>Mature_256_residues
MCGRFALTATPEELLELFGLLEAEGFPARFNIAPTQPIIVVVASERAEPGSNLPERKALLVRWGFTPGWVKDPRKFPLLI
NARAETAIEKAAFRAAMRHRRVLVPASGFYEWQRPAKGSRDAAQAFWVRPRKGGIVALAGLMETWSSADGSEVDTAAILT
TGANRAVSHIHDRMPVVIQPEDFSRWLDCKSQEPRDVADLMVPAAEDYFEAIPISEKVNKVTNTGPDLQDEVTPAAPIPK
KRRADDRDDGGQMSLF

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=228, Percent_Identity=28.0701754385965, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI54607104, Length=228, Percent_Identity=28.0701754385965, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI48994894, Length=237, Percent_Identity=31.6455696202532, Blast_Score=96, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323761, Length=265, Percent_Identity=24.9056603773585, Blast_Score=79, Evalue=7e-16,
Organism=Drosophila melanogaster, GI21355761, Length=296, Percent_Identity=24.6621621621622, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 28275; Mature: 28275

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFALTATPEELLELFGLLEAEGFPARFNIAPTQPIIVVVASERAEPGSNLPERKALL
CCCCEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEE
VRWGFTPGWVKDPRKFPLLINARAETAIEKAAFRAAMRHRRVLVPASGFYEWQRPAKGSR
EEECCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCEEEECCCCCHHHCCCCCCCC
DAAQAFWVRPRKGGIVALAGLMETWSSADGSEVDTAAILTTGANRAVSHIHDRMPVVIQP
HHHHHHEECCCCCCEEEHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEECC
EDFSRWLDCKSQEPRDVADLMVPAAEDYFEAIPISEKVNKVTNTGPDLQDEVTPAAPIPK
CHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCHHCCCCCCCCCH
KRRADDRDDGGQMSLF
HCCCCCCCCCCCEECC
>Mature Secondary Structure
MCGRFALTATPEELLELFGLLEAEGFPARFNIAPTQPIIVVVASERAEPGSNLPERKALL
CCCCEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEE
VRWGFTPGWVKDPRKFPLLINARAETAIEKAAFRAAMRHRRVLVPASGFYEWQRPAKGSR
EEECCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCEEEECCCCCHHHCCCCCCCC
DAAQAFWVRPRKGGIVALAGLMETWSSADGSEVDTAAILTTGANRAVSHIHDRMPVVIQP
HHHHHHEECCCCCCEEEHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEECC
EDFSRWLDCKSQEPRDVADLMVPAAEDYFEAIPISEKVNKVTNTGPDLQDEVTPAAPIPK
CHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCHHCCCCCCCCCH
KRRADDRDDGGQMSLF
HCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]