| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395768
Identifier: 150395768
GI number: 150395768
Start: 587706
End: 588212
Strand: Direct
Name: 150395768
Synonym: Smed_0544
Alternate gene names: NA
Gene position: 587706-588212 (Clockwise)
Preceding gene: 150395765
Following gene: 150395769
Centisome position: 15.54
GC content: 64.1
Gene sequence:
>507_bases GTGAGTGAAGGAAAGTCCCGCCGGGGCGTCGTTCAGATCAGCGAAGTCGCCAATGGCCTGATTGATCCGGTGCTGGCGAA GCGTGCCGGCATCAATACGATGCTGCTCGGTTCGTGGGACGAGATCGCGGGATCGGAATTTGCCGATTGCACCCGGCCGG AGAAGATTGCCTGGCCGCGTCGCGCTTCCGAAATGACCGGCGAAGGCGGCCATCAACCGGGTGTGCTGACGGTGGCCTGC GAGGGCGCCCGGGCGCTTTTCCTGACGCATGCTCAAGGCGAACTTATCCAGCGGATCAACGGGTTCTTCGGCTTCCATGC GATCGGTCAGCTGCGCATCGTGCAGAAGCCGGTCGCGCCGCCTCCCAAGCGCTACAGTCGACCGAAACCGCTGGTCGGGG AAGCTGCCCGGCGGCTGGAAACCATGATGGAGGGCGTCGAGAGCGAGGCTTTGAAGGCGGCGTTGAAGCGGCTCGGGACG GCCGTTCTGTCGCCAAAACGACGCTGA
Upstream 100 bases:
>100_bases CGGGCTTATACTTTGAAAAGCTTGATCGCTCCGCGCAGGGAAACATGCGGCAGGCAGAGCTGCAAGGCACCGATCGCAAT TGCAAACAGAAAGTCGTTCC
Downstream 100 bases:
>100_bases CGGTCACAATTGTTTGAACTCTGTTGAAACGCCCCCTCTTGTCGCCCTGCACGCGGCAAGTTATCGAAACCACGCTTTAA TTTTCCTCGAGTAGAACACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSEGKSRRGVVQISEVANGLIDPVLAKRAGINTMLLGSWDEIAGSEFADCTRPEKIAWPRRASEMTGEGGHQPGVLTVAC EGARALFLTHAQGELIQRINGFFGFHAIGQLRIVQKPVAPPPKRYSRPKPLVGEAARRLETMMEGVESEALKAALKRLGT AVLSPKRR
Sequences:
>Translated_168_residues MSEGKSRRGVVQISEVANGLIDPVLAKRAGINTMLLGSWDEIAGSEFADCTRPEKIAWPRRASEMTGEGGHQPGVLTVAC EGARALFLTHAQGELIQRINGFFGFHAIGQLRIVQKPVAPPPKRYSRPKPLVGEAARRLETMMEGVESEALKAALKRLGT AVLSPKRR >Mature_167_residues SEGKSRRGVVQISEVANGLIDPVLAKRAGINTMLLGSWDEIAGSEFADCTRPEKIAWPRRASEMTGEGGHQPGVLTVACE GARALFLTHAQGELIQRINGFFGFHAIGQLRIVQKPVAPPPKRYSRPKPLVGEAARRLETMMEGVESEALKAALKRLGTA VLSPKRR
Specific function: Unknown
COG id: COG5389
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18223; Mature: 18092
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGKSRRGVVQISEVANGLIDPVLAKRAGINTMLLGSWDEIAGSEFADCTRPEKIAWPR CCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCHHCCCCCCCCCCC RASEMTGEGGHQPGVLTVACEGARALFLTHAQGELIQRINGFFGFHAIGQLRIVQKPVAP HHHHCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCC PPKRYSRPKPLVGEAARRLETMMEGVESEALKAALKRLGTAVLSPKRR CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SEGKSRRGVVQISEVANGLIDPVLAKRAGINTMLLGSWDEIAGSEFADCTRPEKIAWPR CCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCHHCCCCCCCCCCC RASEMTGEGGHQPGVLTVACEGARALFLTHAQGELIQRINGFFGFHAIGQLRIVQKPVAP HHHHCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCC PPKRYSRPKPLVGEAARRLETMMEGVESEALKAALKRLGTAVLSPKRR CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA