Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 150008266

GI number: 150008266

Start: 1931487

End: 1933841

Strand: Reverse

Name: ybjZ [C]

Synonym: BDI_1635

Alternate gene names: 150008266

Gene position: 1933841-1931487 (Counterclockwise)

Preceding gene: 150008267

Following gene: 150008265

Centisome position: 40.19

GC content: 41.02

Gene sequence:

>2355_bases
ATGAAAACTATTTTGAGGAATCTCTTGAGTGTATTGCGCCGTTTCAAGATGGCGACACTTTTAAATGTATTAGGACTATC
TGTGGCTTTTTCTGCTTTCATCTTGATTATGATGCAAGTCGAGTATGATCAGAATTTTGACCGAGGATATACGGATACGG
AATCTATATTTCGGGTAGAAGCTATGTTTGAGGATGGTGGGCAGGCAGTTATTTGCCGTCCGCTGGCCGATGCTTTTATC
CAATCCTCGCCTCATATCGTAGCTGGGACCTTGGCGAATCCTTGGGGAGGGGACTTGTTTTTCTCTGTAGAAGAGAATGG
TGTACGGAATACTTTTAAGGAACAATGTATAAATGTTTATCCTGAATTCACGAAGGTATTTGACTTTAAATTTCAGGAAG
GAAATCCGGAGGCGTTACAGGAGCCAAACGTTGTTTTGTTGCCGCAGAGCATGGCTCAGAAGTTTTTTGGGAATCAATCG
GCTGTAGGCAAGCAATTGAAGTTTGAGAATGGAGATCATCTAACGGTAGGTGGAGTGTATAAGGATTATCCACGGAATTC
ATCTGTACGGAATTGTATTTATCAAAAGATGGACCCGAAGGAAAACGCCCAAAGCTGGGGAAACTGGAATTATATTTTCT
ATATCCGTTTGGACAATCCGAAGAATGTCGAGGGGTTATTTGAAAATTTCAAGGCACATTTTGATCCTGCTCTAATAAAG
GATAATAGTTTCTCATGGGGGGGATCTGGAATGACTTTCCGTATTAATCCGTTGCCTGATGTTCATTATACGACTGATGT
AAAATATGACCAGACCCCGAAAGCCAGCAGGCAAACTTTGATGATATTATTTGCCATAGCTATCGTGATCGTGGTAATCG
CCGGAATTAATTTCACGAATTTCAGTACGGCACTTACCCCGATGCGTATTAAGAGTATTAATACACAAAAAGTATTAGGG
GGAAAAGAATCTGTGATCCGTTTTGCTTTGATTTTAGAAGCGGTGTTAATAAGTATAATCTCTTATTTGTTAGGACTGCT
ATTAGTTTATATTGCGGGGAAGACGGAAATAGCCTCATTGATAAATGCCGATATTTCGTTATCAATGCATATCGGATTGG
TTTTGGCTACAGCTTTTATCTCAATAGCTACCGGGTTTCTTGCCGGTATATATCCAGCATATTATATGACTTCTTTCCCA
CCGGCTTTAGTGTTGAAAGGTAGTTTTGGCTTGTCTCCGAAGGGACGTCAATTACGAAATGCATTGATAGGAGTGCAGTA
TGTAGCTTCTTTCGGATTAATTATTGGTGCTACATTCATGTATTTGCAGAATTATTATATGCAAAACACCCCTCTCGGTT
ATGATAAGGATGAGATAATTATTACGAATATGAATAACAATATCCGGAAAAGTCGGGATGCCTTCGCCAGCCAAGTGAAA
TCTTTCTCCGGTATCGAAGAGGTTACATATGCGGAGATGCTCCTTTCTAGTCAGGACCAATACATGGGATGGGGACGTAA
ATACCGGGATAAGGATATACAATTCCAATGTCTACCGGTTGAACCTTCTTTTTTGAAGGTGATGAATGTGAAAATATCGG
AAGGTCGTGATTTCCGGGAGGAAGATAAGGCGAAACGTTATGGCACGTTTGTCTTTAACGAACGTGCCCGGACAGAATAT
GGGCTGGAGATAGGATCTTTAATAGATAGTATGGAGATTGTCGGTTTTATGCCGGATGTTAAATTCGCCTCTTTCCGTAC
GGAGGTAACGCCTATGGCCTTTTTTGTATGGGGTACTAATAATTGGGGAAACCAACCTAATTACGCTTATATAAAGGTAA
AAGCCGGCTCTGACTTACGGGGGGCTATGCAACATGTCAAGACTACGCTTCAATCATTTGATCCGGAATACCCGTTTAAT
GTCCGTTTCTTCGATGAGGTATTGAACGGACTTTATGAGAAAGAGAGAAGCCTCAGTTCATTGATTACCTTATTTAGTTT
AATCGCGATCTTTATCTCGGTGGTAGGGGTATTCGGTTTGGTCGTATTCGATAGTGAGTACCGGAAGAAAGAGATCGGTA
TCCGTAAGGTATTAGGCTCTACTACCGAGGAGATTATCGTGATGTTTAACAAGACATACATAAGAATCTTATGTGTTTGT
TTTGTTTTGGGGGCGCCTATCGCCGGTTATGTGGTACATCGATGGCTTGAGAATTTCGCTTATAAGACTCCTATGTATTG
GTGGGTGTATTTGATCGCTTTTGCTATCATAGCGGTTATCACGATATTGACTGTCACTTTCCAGAACTGGCGTGCGGCGA
ATGAGAATCCAGTACATAGTATTAAGAATGAATAG

Upstream 100 bases:

>100_bases
ATTTGGGGATGCGTGATCCTGAAATCTTGGAATATCGCCAATGAGAATCCGGTCCGTAGCATTAAGAACGAATAATATAA
CAGGTAATATAAAATTACGT

Downstream 100 bases:

>100_bases
AAGATTTTTGTAGAATCATATTGCTGTTTTCATAGAAAAGTATGTGTCCAATAATTGTACAATGGTGTCCAATTATTGGA
CACTTCTGTTTTATGAATTG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MKTILRNLLSVLRRFKMATLLNVLGLSVAFSAFILIMMQVEYDQNFDRGYTDTESIFRVEAMFEDGGQAVICRPLADAFI
QSSPHIVAGTLANPWGGDLFFSVEENGVRNTFKEQCINVYPEFTKVFDFKFQEGNPEALQEPNVVLLPQSMAQKFFGNQS
AVGKQLKFENGDHLTVGGVYKDYPRNSSVRNCIYQKMDPKENAQSWGNWNYIFYIRLDNPKNVEGLFENFKAHFDPALIK
DNSFSWGGSGMTFRINPLPDVHYTTDVKYDQTPKASRQTLMILFAIAIVIVVIAGINFTNFSTALTPMRIKSINTQKVLG
GKESVIRFALILEAVLISIISYLLGLLLVYIAGKTEIASLINADISLSMHIGLVLATAFISIATGFLAGIYPAYYMTSFP
PALVLKGSFGLSPKGRQLRNALIGVQYVASFGLIIGATFMYLQNYYMQNTPLGYDKDEIIITNMNNNIRKSRDAFASQVK
SFSGIEEVTYAEMLLSSQDQYMGWGRKYRDKDIQFQCLPVEPSFLKVMNVKISEGRDFREEDKAKRYGTFVFNERARTEY
GLEIGSLIDSMEIVGFMPDVKFASFRTEVTPMAFFVWGTNNWGNQPNYAYIKVKAGSDLRGAMQHVKTTLQSFDPEYPFN
VRFFDEVLNGLYEKERSLSSLITLFSLIAIFISVVGVFGLVVFDSEYRKKEIGIRKVLGSTTEEIIVMFNKTYIRILCVC
FVLGAPIAGYVVHRWLENFAYKTPMYWWVYLIAFAIIAVITILTVTFQNWRAANENPVHSIKNE

Sequences:

>Translated_784_residues
MKTILRNLLSVLRRFKMATLLNVLGLSVAFSAFILIMMQVEYDQNFDRGYTDTESIFRVEAMFEDGGQAVICRPLADAFI
QSSPHIVAGTLANPWGGDLFFSVEENGVRNTFKEQCINVYPEFTKVFDFKFQEGNPEALQEPNVVLLPQSMAQKFFGNQS
AVGKQLKFENGDHLTVGGVYKDYPRNSSVRNCIYQKMDPKENAQSWGNWNYIFYIRLDNPKNVEGLFENFKAHFDPALIK
DNSFSWGGSGMTFRINPLPDVHYTTDVKYDQTPKASRQTLMILFAIAIVIVVIAGINFTNFSTALTPMRIKSINTQKVLG
GKESVIRFALILEAVLISIISYLLGLLLVYIAGKTEIASLINADISLSMHIGLVLATAFISIATGFLAGIYPAYYMTSFP
PALVLKGSFGLSPKGRQLRNALIGVQYVASFGLIIGATFMYLQNYYMQNTPLGYDKDEIIITNMNNNIRKSRDAFASQVK
SFSGIEEVTYAEMLLSSQDQYMGWGRKYRDKDIQFQCLPVEPSFLKVMNVKISEGRDFREEDKAKRYGTFVFNERARTEY
GLEIGSLIDSMEIVGFMPDVKFASFRTEVTPMAFFVWGTNNWGNQPNYAYIKVKAGSDLRGAMQHVKTTLQSFDPEYPFN
VRFFDEVLNGLYEKERSLSSLITLFSLIAIFISVVGVFGLVVFDSEYRKKEIGIRKVLGSTTEEIIVMFNKTYIRILCVC
FVLGAPIAGYVVHRWLENFAYKTPMYWWVYLIAFAIIAVITILTVTFQNWRAANENPVHSIKNE
>Mature_784_residues
MKTILRNLLSVLRRFKMATLLNVLGLSVAFSAFILIMMQVEYDQNFDRGYTDTESIFRVEAMFEDGGQAVICRPLADAFI
QSSPHIVAGTLANPWGGDLFFSVEENGVRNTFKEQCINVYPEFTKVFDFKFQEGNPEALQEPNVVLLPQSMAQKFFGNQS
AVGKQLKFENGDHLTVGGVYKDYPRNSSVRNCIYQKMDPKENAQSWGNWNYIFYIRLDNPKNVEGLFENFKAHFDPALIK
DNSFSWGGSGMTFRINPLPDVHYTTDVKYDQTPKASRQTLMILFAIAIVIVVIAGINFTNFSTALTPMRIKSINTQKVLG
GKESVIRFALILEAVLISIISYLLGLLLVYIAGKTEIASLINADISLSMHIGLVLATAFISIATGFLAGIYPAYYMTSFP
PALVLKGSFGLSPKGRQLRNALIGVQYVASFGLIIGATFMYLQNYYMQNTPLGYDKDEIIITNMNNNIRKSRDAFASQVK
SFSGIEEVTYAEMLLSSQDQYMGWGRKYRDKDIQFQCLPVEPSFLKVMNVKISEGRDFREEDKAKRYGTFVFNERARTEY
GLEIGSLIDSMEIVGFMPDVKFASFRTEVTPMAFFVWGTNNWGNQPNYAYIKVKAGSDLRGAMQHVKTTLQSFDPEYPFN
VRFFDEVLNGLYEKERSLSSLITLFSLIAIFISVVGVFGLVVFDSEYRKKEIGIRKVLGSTTEEIIVMFNKTYIRILCVC
FVLGAPIAGYVVHRWLENFAYKTPMYWWVYLIAFAIIAVITILTVTFQNWRAANENPVHSIKNE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88816; Mature: 88816

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTILRNLLSVLRRFKMATLLNVLGLSVAFSAFILIMMQVEYDQNFDRGYTDTESIFRVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEE
AMFEDGGQAVICRPLADAFIQSSPHIVAGTLANPWGGDLFFSVEENGVRNTFKEQCINVY
EHHCCCCCEEEEHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHC
PEFTKVFDFKFQEGNPEALQEPNVVLLPQSMAQKFFGNQSAVGKQLKFENGDHLTVGGVY
CCHHHHEEEEECCCCCHHHCCCCEEEECHHHHHHHCCCCHHHCCCCEECCCCEEEECCCC
KDYPRNSSVRNCIYQKMDPKENAQSWGNWNYIFYIRLDNPKNVEGLFENFKAHFDPALIK
CCCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEE
DNSFSWGGSGMTFRINPLPDVHYTTDVKYDQTPKASRQTLMILFAIAIVIVVIAGINFTN
CCCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
FSTALTPMRIKSINTQKVLGGKESVIRFALILEAVLISIISYLLGLLLVYIAGKTEIASL
CHHCCCCHHEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
INADISLSMHIGLVLATAFISIATGFLAGIYPAYYMTSFPPALVLKGSFGLSPKGRQLRN
HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH
ALIGVQYVASFGLIIGATFMYLQNYYMQNTPLGYDKDEIIITNMNNNIRKSRDAFASQVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
SFSGIEEVTYAEMLLSSQDQYMGWGRKYRDKDIQFQCLPVEPSFLKVMNVKISEGRDFRE
HHCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHEEEEEECCCCCCHH
EDKAKRYGTFVFNERARTEYGLEIGSLIDSMEIVGFMPDVKFASFRTEVTPMAFFVWGTN
HHHHHHHCCEEECCCCCHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEECC
NWGNQPNYAYIKVKAGSDLRGAMQHVKTTLQSFDPEYPFNVRFFDEVLNGLYEKERSLSS
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LITLFSLIAIFISVVGVFGLVVFDSEYRKKEIGIRKVLGSTTEEIIVMFNKTYIRILCVC
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHEEEEECHHHHHHHHHH
FVLGAPIAGYVVHRWLENFAYKTPMYWWVYLIAFAIIAVITILTVTFQNWRAANENPVHS
HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
IKNE
CCCC
>Mature Secondary Structure
MKTILRNLLSVLRRFKMATLLNVLGLSVAFSAFILIMMQVEYDQNFDRGYTDTESIFRVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEE
AMFEDGGQAVICRPLADAFIQSSPHIVAGTLANPWGGDLFFSVEENGVRNTFKEQCINVY
EHHCCCCCEEEEHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHC
PEFTKVFDFKFQEGNPEALQEPNVVLLPQSMAQKFFGNQSAVGKQLKFENGDHLTVGGVY
CCHHHHEEEEECCCCCHHHCCCCEEEECHHHHHHHCCCCHHHCCCCEECCCCEEEECCCC
KDYPRNSSVRNCIYQKMDPKENAQSWGNWNYIFYIRLDNPKNVEGLFENFKAHFDPALIK
CCCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEE
DNSFSWGGSGMTFRINPLPDVHYTTDVKYDQTPKASRQTLMILFAIAIVIVVIAGINFTN
CCCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
FSTALTPMRIKSINTQKVLGGKESVIRFALILEAVLISIISYLLGLLLVYIAGKTEIASL
CHHCCCCHHEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
INADISLSMHIGLVLATAFISIATGFLAGIYPAYYMTSFPPALVLKGSFGLSPKGRQLRN
HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH
ALIGVQYVASFGLIIGATFMYLQNYYMQNTPLGYDKDEIIITNMNNNIRKSRDAFASQVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
SFSGIEEVTYAEMLLSSQDQYMGWGRKYRDKDIQFQCLPVEPSFLKVMNVKISEGRDFRE
HHCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHEEEEEECCCCCCHH
EDKAKRYGTFVFNERARTEYGLEIGSLIDSMEIVGFMPDVKFASFRTEVTPMAFFVWGTN
HHHHHHHCCEEECCCCCHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEECC
NWGNQPNYAYIKVKAGSDLRGAMQHVKTTLQSFDPEYPFNVRFFDEVLNGLYEKERSLSS
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LITLFSLIAIFISVVGVFGLVVFDSEYRKKEIGIRKVLGSTTEEIIVMFNKTYIRILCVC
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHEEEEECHHHHHHHHHH
FVLGAPIAGYVVHRWLENFAYKTPMYWWVYLIAFAIIAVITILTVTFQNWRAANENPVHS
HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
IKNE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA