| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008265
Identifier: 150008265
GI number: 150008265
Start: 1928737
End: 1931121
Strand: Reverse
Name: 150008265
Synonym: BDI_1634
Alternate gene names: NA
Gene position: 1931121-1928737 (Counterclockwise)
Preceding gene: 150008266
Following gene: 150008264
Centisome position: 40.14
GC content: 45.41
Gene sequence:
>2385_bases ATGAAAACAATCATACGCAATTTCATCAATGTATTAATACGTTTCAAGGTAGCTACCTTTTTGAATGTAGCGGGATTAGC GGTCGCTTTCGCCGCGTTTTTAATTATCATGATGCAAGTAAGCTTTGAGCATAACTTCGATCGTTGTCATCCGAACTCGA CCCGGATTTATCGGATGGGGCTTTCTTTCCCGGATGGAGCGAGCATGATCCATTGCCGCCCGTTGATAGAGTCGTTTATC CACTCTTCCCCGCATATTGAGGCCGGTACGTTAATTAATCCGTATATAGGAGAGATGTATGTGACTGTTACAAGAAAAGA GGGAAAGCAAGGTTTCAAGGAGACGATCATAACTTGCCATCCGGAGATTACCCGGATGTTCCAGTTTACGATGCGTGAAG GAGAATCTTCTTGCTTGTCGGAACCGGAAAAAGCCTTGATACCGGAAAGTATGGCTCACCGGTTATTTGGAAAGGAATCG GCAATTGGAAAGCAGATCGTTTCCGATGGTGGGATCTGGACAAAACCGGGTGTGAAATATTTGGTCGTAGGAGGTGTTTA TAAGGATTTCCCGGAAAACACACAGTTGAAAAACGTGATTTATACAGAGATGTCTCCGGATTACGCACTGACGAATTGGA TAAGTAGTAACTATTTCTGTTACGTGATGCTAGATCCTTCTGCTTCCCCGAAAGAAGTGGCTGGGAACTTTGATGCCCAT TTTGACTATTCGAAGCAATATGGGGATATGGCGAAAGATATACATGCCGAGCTGGTCCCCCTAACCGATATTTATTATAT GAACGAGGATTCCAGCGGAAGTTTAGTGAAAAGCGGTAGTGCGGAGAAAACCCGGCTACTGATGCTGATCGCTTTTCTGG TGATTATCGTGGCGGGTATCAACTTCACGAATTTTAGTACCTCTTTGGCGCCTTTGCGCATCAAGAGTATCAACACGCAA AAAGTGCTGGGGAGTTCTGCCGGCATATTACGTGCTTCCCTGTTATTTGAGGCCGTGGGCATTAGCTTGCTTGCTTTCCT TTGTTCTTTGTTTATCGTTTGGGGATTAGGACATATGGGATGGTTGTATTTCGTGCAAGCGGATACGGCACTGTCCGCTT ATCCCGGTTTGGTGGGAGGCTTGGCAGCATTGTCTGTTATAATAGGTCTTATCGCGGGGATCTATCCATCTTTGTATATG ACATCTTTTCCTCCGGCAGTGGTTTTGAAAGGCTCCTTCGGGCTTTCTTCCTCGGGGAAGAAGTTGCGTACGGCATTGAT CGGTTTTCAGTTTGTGGTCTCTATCGTGTTGATTATATCAGCCATGTTCGTTCGTCAGCAAAATAGGTTCATGCAAAAGT ACTCTTTAGGCTTCGACAAGGATCAGGTAGTGGTTGTCGAGTTGAATGGGAATATTATGCGTAACCATAAGGATAGTTAC GTGGGCGGATTGAAAGAATATCCGGGGATAGAGGATGTGGCGTTTTGTCGCCAGAAGTTCGGGTCGGAGGATAGTTACCG TACGTGGTCTGGCATCTATAAGGAACAGAGTGTCGGTTTTACGTCTCTCGCTGTCTCTTGGAATTTCTTCAAGGTAATGG GTATTCCCTTGATCGGGGGGCGGATGCCTACCGAGTCTGATGAGAAAGGCAACAGCTATAGCTATGTATTCAATAAACAA ATGCGGGATAAATGGAGCATGGAGCCGAATGATATCATGCGGATTCCATGGCTTGAGGAGGAATCGGCCGATGGTTCCTT GATCGGGTTTGTGGATGATGTCAAATTCACCTCCTTGCGACAGGGCGTCTCCGAGTTAGGTTTTGTTATCAATGAACCCA GCTTGATGCTGTATTCGTTTATCCGGGTGAAGGCGGGAAGCGATATCGTGGGTGTGGTGGATCATATCCGCCAGACGGTG GCTCGCTTGGACCCTACCTATCCTTGTGAGGTGGAATTTTATGATGAGATTTTCGATCATTTATATCATCAGGAACGGAA TTTAAGTACGATGATTTTATTGTTTAGCCTGTTGGCTGTGATTATCTCTATTGTCGGTATATTCGGCCTCGTTATATTCG AGACCCAGTATCGCCGGAAAGAGATCGGCATTCGTAAGGTATTCGGGGCCACGGTTCATGAGATCTTGGTTATGTTCAAT AAGATTTATTTCCGTATTGTCTGCGTTTGCTTTATCATAGCGGCTCCCTTGGCTTATTATGGCGTACGGAAATGGTTAGA GGGTTTCGCTTATAAAACTCCTATTTATTGGTGGATATTTGCGTTCGCTCTATTAATAGTCTCCTTAATAACGATGTTTA CGGTAACTTTCCAGAACTGGCGTGCGGCGAACGCGAACCCGGTGGATAGCATTAAGACGGAATAA
Upstream 100 bases:
>100_bases AAGGTTTCTTTGAATATCTTGAAACGAATGAATATCAGCCATCTTATTTAAGGAATACTCTTTTTGGGTCGATTTTAGTA TCAATAAAATAGAGTAAGTT
Downstream 100 bases:
>100_bases TAAATGAAACTATAATAATAAGATGAAAACGATTATTCGGAACTTTCTGAGTGTGTTGAGGCGGTTTAAAATGGCGACCG CATTGAACGTAGCCGGTCTT
Product: putative FtsX-related transmembrane transport protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 794; Mature: 794
Protein sequence:
>794_residues MKTIIRNFINVLIRFKVATFLNVAGLAVAFAAFLIIMMQVSFEHNFDRCHPNSTRIYRMGLSFPDGASMIHCRPLIESFI HSSPHIEAGTLINPYIGEMYVTVTRKEGKQGFKETIITCHPEITRMFQFTMREGESSCLSEPEKALIPESMAHRLFGKES AIGKQIVSDGGIWTKPGVKYLVVGGVYKDFPENTQLKNVIYTEMSPDYALTNWISSNYFCYVMLDPSASPKEVAGNFDAH FDYSKQYGDMAKDIHAELVPLTDIYYMNEDSSGSLVKSGSAEKTRLLMLIAFLVIIVAGINFTNFSTSLAPLRIKSINTQ KVLGSSAGILRASLLFEAVGISLLAFLCSLFIVWGLGHMGWLYFVQADTALSAYPGLVGGLAALSVIIGLIAGIYPSLYM TSFPPAVVLKGSFGLSSSGKKLRTALIGFQFVVSIVLIISAMFVRQQNRFMQKYSLGFDKDQVVVVELNGNIMRNHKDSY VGGLKEYPGIEDVAFCRQKFGSEDSYRTWSGIYKEQSVGFTSLAVSWNFFKVMGIPLIGGRMPTESDEKGNSYSYVFNKQ MRDKWSMEPNDIMRIPWLEEESADGSLIGFVDDVKFTSLRQGVSELGFVINEPSLMLYSFIRVKAGSDIVGVVDHIRQTV ARLDPTYPCEVEFYDEIFDHLYHQERNLSTMILLFSLLAVIISIVGIFGLVIFETQYRRKEIGIRKVFGATVHEILVMFN KIYFRIVCVCFIIAAPLAYYGVRKWLEGFAYKTPIYWWIFAFALLIVSLITMFTVTFQNWRAANANPVDSIKTE
Sequences:
>Translated_794_residues MKTIIRNFINVLIRFKVATFLNVAGLAVAFAAFLIIMMQVSFEHNFDRCHPNSTRIYRMGLSFPDGASMIHCRPLIESFI HSSPHIEAGTLINPYIGEMYVTVTRKEGKQGFKETIITCHPEITRMFQFTMREGESSCLSEPEKALIPESMAHRLFGKES AIGKQIVSDGGIWTKPGVKYLVVGGVYKDFPENTQLKNVIYTEMSPDYALTNWISSNYFCYVMLDPSASPKEVAGNFDAH FDYSKQYGDMAKDIHAELVPLTDIYYMNEDSSGSLVKSGSAEKTRLLMLIAFLVIIVAGINFTNFSTSLAPLRIKSINTQ KVLGSSAGILRASLLFEAVGISLLAFLCSLFIVWGLGHMGWLYFVQADTALSAYPGLVGGLAALSVIIGLIAGIYPSLYM TSFPPAVVLKGSFGLSSSGKKLRTALIGFQFVVSIVLIISAMFVRQQNRFMQKYSLGFDKDQVVVVELNGNIMRNHKDSY VGGLKEYPGIEDVAFCRQKFGSEDSYRTWSGIYKEQSVGFTSLAVSWNFFKVMGIPLIGGRMPTESDEKGNSYSYVFNKQ MRDKWSMEPNDIMRIPWLEEESADGSLIGFVDDVKFTSLRQGVSELGFVINEPSLMLYSFIRVKAGSDIVGVVDHIRQTV ARLDPTYPCEVEFYDEIFDHLYHQERNLSTMILLFSLLAVIISIVGIFGLVIFETQYRRKEIGIRKVFGATVHEILVMFN KIYFRIVCVCFIIAAPLAYYGVRKWLEGFAYKTPIYWWIFAFALLIVSLITMFTVTFQNWRAANANPVDSIKTE >Mature_794_residues MKTIIRNFINVLIRFKVATFLNVAGLAVAFAAFLIIMMQVSFEHNFDRCHPNSTRIYRMGLSFPDGASMIHCRPLIESFI HSSPHIEAGTLINPYIGEMYVTVTRKEGKQGFKETIITCHPEITRMFQFTMREGESSCLSEPEKALIPESMAHRLFGKES AIGKQIVSDGGIWTKPGVKYLVVGGVYKDFPENTQLKNVIYTEMSPDYALTNWISSNYFCYVMLDPSASPKEVAGNFDAH FDYSKQYGDMAKDIHAELVPLTDIYYMNEDSSGSLVKSGSAEKTRLLMLIAFLVIIVAGINFTNFSTSLAPLRIKSINTQ KVLGSSAGILRASLLFEAVGISLLAFLCSLFIVWGLGHMGWLYFVQADTALSAYPGLVGGLAALSVIIGLIAGIYPSLYM TSFPPAVVLKGSFGLSSSGKKLRTALIGFQFVVSIVLIISAMFVRQQNRFMQKYSLGFDKDQVVVVELNGNIMRNHKDSY VGGLKEYPGIEDVAFCRQKFGSEDSYRTWSGIYKEQSVGFTSLAVSWNFFKVMGIPLIGGRMPTESDEKGNSYSYVFNKQ MRDKWSMEPNDIMRIPWLEEESADGSLIGFVDDVKFTSLRQGVSELGFVINEPSLMLYSFIRVKAGSDIVGVVDHIRQTV ARLDPTYPCEVEFYDEIFDHLYHQERNLSTMILLFSLLAVIISIVGIFGLVIFETQYRRKEIGIRKVFGATVHEILVMFN KIYFRIVCVCFIIAAPLAYYGVRKWLEGFAYKTPIYWWIFAFALLIVSLITMFTVTFQNWRAANANPVDSIKTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89236; Mature: 89236
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIIRNFINVLIRFKVATFLNVAGLAVAFAAFLIIMMQVSFEHNFDRCHPNSTRIYRMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC LSFPDGASMIHCRPLIESFIHSSPHIEAGTLINPYIGEMYVTVTRKEGKQGFKETIITCH CCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHCHHHHHHEECC PEITRMFQFTMREGESSCLSEPEKALIPESMAHRLFGKESAIGKQIVSDGGIWTKPGVKY HHHHHHHHHHHHCCCHHHHCCCHHHHCCHHHHHHHHCCHHHHHHHHHCCCCEECCCCCEE LVVGGVYKDFPENTQLKNVIYTEMSPDYALTNWISSNYFCYVMLDPSASPKEVAGNFDAH EEECCHHHCCCCCCCHHHEEEECCCCCHHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCC FDYSKQYGDMAKDIHAELVPLTDIYYMNEDSSGSLVKSGSAEKTRLLMLIAFLVIIVAGI CCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCC NFTNFSTSLAPLRIKSINTQKVLGSSAGILRASLLFEAVGISLLAFLCSLFIVWGLGHMG CCCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC WLYFVQADTALSAYPGLVGGLAALSVIIGLIAGIYPSLYMTSFPPAVVLKGSFGLSSSGK EEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCH KLRTALIGFQFVVSIVLIISAMFVRQQNRFMQKYSLGFDKDQVVVVELNGNIMRNHKDSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCCHHH VGGLKEYPGIEDVAFCRQKFGSEDSYRTWSGIYKEQSVGFTSLAVSWNFFKVMGIPLIGG HCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHEECCCEECC RMPTESDEKGNSYSYVFNKQMRDKWSMEPNDIMRIPWLEEESADGSLIGFVDDVKFTSLR CCCCCCCCCCCCEEEEECHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEECCCHHHHHH QGVSELGFVINEPSLMLYSFIRVKAGSDIVGVVDHIRQTVARLDPTYPCEVEFYDEIFDH HHHHHHCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LYHQERNLSTMILLFSLLAVIISIVGIFGLVIFETQYRRKEIGIRKVFGATVHEILVMFN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KIYFRIVCVCFIIAAPLAYYGVRKWLEGFAYKTPIYWWIFAFALLIVSLITMFTVTFQNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC RAANANPVDSIKTE CCCCCCCCCCCCCC >Mature Secondary Structure MKTIIRNFINVLIRFKVATFLNVAGLAVAFAAFLIIMMQVSFEHNFDRCHPNSTRIYRMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC LSFPDGASMIHCRPLIESFIHSSPHIEAGTLINPYIGEMYVTVTRKEGKQGFKETIITCH CCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHCHHHHHHEECC PEITRMFQFTMREGESSCLSEPEKALIPESMAHRLFGKESAIGKQIVSDGGIWTKPGVKY HHHHHHHHHHHHCCCHHHHCCCHHHHCCHHHHHHHHCCHHHHHHHHHCCCCEECCCCCEE LVVGGVYKDFPENTQLKNVIYTEMSPDYALTNWISSNYFCYVMLDPSASPKEVAGNFDAH EEECCHHHCCCCCCCHHHEEEECCCCCHHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCC FDYSKQYGDMAKDIHAELVPLTDIYYMNEDSSGSLVKSGSAEKTRLLMLIAFLVIIVAGI CCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCC NFTNFSTSLAPLRIKSINTQKVLGSSAGILRASLLFEAVGISLLAFLCSLFIVWGLGHMG CCCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC WLYFVQADTALSAYPGLVGGLAALSVIIGLIAGIYPSLYMTSFPPAVVLKGSFGLSSSGK EEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCH KLRTALIGFQFVVSIVLIISAMFVRQQNRFMQKYSLGFDKDQVVVVELNGNIMRNHKDSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCCHHH VGGLKEYPGIEDVAFCRQKFGSEDSYRTWSGIYKEQSVGFTSLAVSWNFFKVMGIPLIGG HCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHEECCCEECC RMPTESDEKGNSYSYVFNKQMRDKWSMEPNDIMRIPWLEEESADGSLIGFVDDVKFTSLR CCCCCCCCCCCCEEEEECHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEECCCHHHHHH QGVSELGFVINEPSLMLYSFIRVKAGSDIVGVVDHIRQTVARLDPTYPCEVEFYDEIFDH HHHHHHCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LYHQERNLSTMILLFSLLAVIISIVGIFGLVIFETQYRRKEIGIRKVFGATVHEILVMFN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KIYFRIVCVCFIIAAPLAYYGVRKWLEGFAYKTPIYWWIFAFALLIVSLITMFTVTFQNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC RAANANPVDSIKTE CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA