Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
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Accession | NC_009615 |
Length | 4,811,379 |
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The map label for this gene is 150008190
Identifier: 150008190
GI number: 150008190
Start: 1817984
End: 1819348
Strand: Reverse
Name: 150008190
Synonym: BDI_1556
Alternate gene names: NA
Gene position: 1819348-1817984 (Counterclockwise)
Preceding gene: 150008191
Following gene: 150008187
Centisome position: 37.81
GC content: 43.15
Gene sequence:
>1365_bases ATGAAAACAAAACCATTTTTGAGTTTTTGGCAAATTTGGAATCTAACTTTCGGTTTCTTGGGCATTCAATTCGGTTTCGC CCTTCAGAACGCAAATTCAAGTAGAATACTTCAAACCTATGGAGCGGATGTAGAGCAACTATCCTTATTTTGGTTAGCGG CTCCGCTGACAGGTATGATCATACAACCTATCATTGGTCATTATTCCGACCAAACATGGTGCCGTTTAGGACGTCGGCGT CCGTTTTTTCTGGTAGGAGCTATCTTTACGACGATTGCCTTGATATTGATGCCGAATGCGGGATTGTTCTTGTCACCCGG TACAGAGACGGCTATTTTATCTCCCGTATTGATTGGTGCGGGTATGTTGATGATCATGGATGCTTCCATCAATGTAACGA TGGAGCCTTTCCGTGCCTTGGTAGGGGATATGCTACCCGATGAGCAGCATACGACTGGCTTCTCGATCCAGACTTTCTTG ATCGGCATCGGTGCTGTCGTTGGTTCCTTGTTGCCGAGTATTATGAATAAGGTGTTTGGTTTATCTAATACGGCGGTTGC TGGTGAGGTTGCCGATAATGTTAAATTCGCCTTTTATGCCGGTGCGGCGATTTTATTAGCGAGCGTATTATGGACAATTT TTAAGACAAAGGAATATTCCCCAGAAGAGATGGCTGAGTTTCGGCTTTCCGGTGGTGAGGTCATTGAAAAAAGGCGGGAT AGCAATGGTTTTATGGAGATCATGCATGATATCTTTCATATGCCTAAAATAATGTTACAGTTAGGTTTATGCCAGTTTTT CGCTTGGTTTGCCTTGTATTCCATGTGGGTTTATTCTACGCCTGCTATCGCTGAACATGTATATGGGGCAACAGATCCTG CTTCCGCCGAATATGCGATGGCTGGCGATAAGGTAGGTGAGTTATTCAGTATCTATAATTTTGTGGCGATGTTATTCGCT TTATTATTGATCCCGATTGCCCGTCATTTAGGTCGGAAAATGACTCATGCCCTCTGTTTATGCCTAGGAGGGGCAGGGTT GGTTTCTCTCTATTTGTTGAATAACACAGGAATGATGGTCTTTTCTATGATTGGCATCGGTATAGCGTGGGCAAGTATAT TGGCGATGCCTTATGCTATTCTTTCCGATAGTCTTCCCGCTGATAAGATGGGTACTTATATGGGTATATTTAATTTCTTT ATAACGATACCTCAGATCACGAATGGAATCATTCATGGATGGATTGTACGTAATGTTTATCATGGGCATGCCGTGTTCGC TTTGTTAACGGGAGGTGTTTTCTTGTTTTTCGCCGCCGCCGCAGTTAGTCTTGTCAAAGAGAAAAAGTTCAGTAGAAAAG TGTAA
Upstream 100 bases:
>100_bases TACTTCTTTGCATGAATTTGAATAGGGACGACGTCCTGTTTCGGAATAATTCCGTATGTTTGTCACCAAACAAATAAATA CCTTAAAAAACATAATTCTC
Downstream 100 bases:
>100_bases GGTATATAAGTCCGGTTTCCTGTTGTCAAGCGTAAAAACGCTATACCCAAGTCAAACAGCAAGTTATTATAATGTAGGTA GAAAAACGTATCTCAGATAA
Product: putative transport protein
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; MFS Superfamily Sugcific Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKTKPFLSFWQIWNLTFGFLGIQFGFALQNANSSRILQTYGADVEQLSLFWLAAPLTGMIIQPIIGHYSDQTWCRLGRRR PFFLVGAIFTTIALILMPNAGLFLSPGTETAILSPVLIGAGMLMIMDASINVTMEPFRALVGDMLPDEQHTTGFSIQTFL IGIGAVVGSLLPSIMNKVFGLSNTAVAGEVADNVKFAFYAGAAILLASVLWTIFKTKEYSPEEMAEFRLSGGEVIEKRRD SNGFMEIMHDIFHMPKIMLQLGLCQFFAWFALYSMWVYSTPAIAEHVYGATDPASAEYAMAGDKVGELFSIYNFVAMLFA LLLIPIARHLGRKMTHALCLCLGGAGLVSLYLLNNTGMMVFSMIGIGIAWASILAMPYAILSDSLPADKMGTYMGIFNFF ITIPQITNGIIHGWIVRNVYHGHAVFALLTGGVFLFFAAAAVSLVKEKKFSRKV
Sequences:
>Translated_454_residues MKTKPFLSFWQIWNLTFGFLGIQFGFALQNANSSRILQTYGADVEQLSLFWLAAPLTGMIIQPIIGHYSDQTWCRLGRRR PFFLVGAIFTTIALILMPNAGLFLSPGTETAILSPVLIGAGMLMIMDASINVTMEPFRALVGDMLPDEQHTTGFSIQTFL IGIGAVVGSLLPSIMNKVFGLSNTAVAGEVADNVKFAFYAGAAILLASVLWTIFKTKEYSPEEMAEFRLSGGEVIEKRRD SNGFMEIMHDIFHMPKIMLQLGLCQFFAWFALYSMWVYSTPAIAEHVYGATDPASAEYAMAGDKVGELFSIYNFVAMLFA LLLIPIARHLGRKMTHALCLCLGGAGLVSLYLLNNTGMMVFSMIGIGIAWASILAMPYAILSDSLPADKMGTYMGIFNFF ITIPQITNGIIHGWIVRNVYHGHAVFALLTGGVFLFFAAAAVSLVKEKKFSRKV >Mature_454_residues MKTKPFLSFWQIWNLTFGFLGIQFGFALQNANSSRILQTYGADVEQLSLFWLAAPLTGMIIQPIIGHYSDQTWCRLGRRR PFFLVGAIFTTIALILMPNAGLFLSPGTETAILSPVLIGAGMLMIMDASINVTMEPFRALVGDMLPDEQHTTGFSIQTFL IGIGAVVGSLLPSIMNKVFGLSNTAVAGEVADNVKFAFYAGAAILLASVLWTIFKTKEYSPEEMAEFRLSGGEVIEKRRD SNGFMEIMHDIFHMPKIMLQLGLCQFFAWFALYSMWVYSTPAIAEHVYGATDPASAEYAMAGDKVGELFSIYNFVAMLFA LLLIPIARHLGRKMTHALCLCLGGAGLVSLYLLNNTGMMVFSMIGIGIAWASILAMPYAILSDSLPADKMGTYMGIFNFF ITIPQITNGIIHGWIVRNVYHGHAVFALLTGGVFLFFAAAAVSLVKEKKFSRKV
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14916437, Length=250, Percent_Identity=26.8, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49890; Mature: 49890
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKPFLSFWQIWNLTFGFLGIQFGFALQNANSSRILQTYGADVEQLSLFWLAAPLTGMI CCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH IQPIIGHYSDQTWCRLGRRRPFFLVGAIFTTIALILMPNAGLFLSPGTETAILSPVLIGA HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHC GMLMIMDASINVTMEPFRALVGDMLPDEQHTTGFSIQTFLIGIGAVVGSLLPSIMNKVFG CCCEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LSNTAVAGEVADNVKFAFYAGAAILLASVLWTIFKTKEYSPEEMAEFRLSGGEVIEKRRD CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCC SNGFMEIMHDIFHMPKIMLQLGLCQFFAWFALYSMWVYSTPAIAEHVYGATDPASAEYAM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHH AGDKVGELFSIYNFVAMLFALLLIPIARHLGRKMTHALCLCLGGAGLVSLYLLNNTGMMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHH FSMIGIGIAWASILAMPYAILSDSLPADKMGTYMGIFNFFITIPQITNGIIHGWIVRNVY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGHAVFALLTGGVFLFFAAAAVSLVKEKKFSRKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTKPFLSFWQIWNLTFGFLGIQFGFALQNANSSRILQTYGADVEQLSLFWLAAPLTGMI CCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH IQPIIGHYSDQTWCRLGRRRPFFLVGAIFTTIALILMPNAGLFLSPGTETAILSPVLIGA HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHC GMLMIMDASINVTMEPFRALVGDMLPDEQHTTGFSIQTFLIGIGAVVGSLLPSIMNKVFG CCCEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LSNTAVAGEVADNVKFAFYAGAAILLASVLWTIFKTKEYSPEEMAEFRLSGGEVIEKRRD CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCC SNGFMEIMHDIFHMPKIMLQLGLCQFFAWFALYSMWVYSTPAIAEHVYGATDPASAEYAM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHH AGDKVGELFSIYNFVAMLFALLLIPIARHLGRKMTHALCLCLGGAGLVSLYLLNNTGMMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHH FSMIGIGIAWASILAMPYAILSDSLPADKMGTYMGIFNFFITIPQITNGIIHGWIVRNVY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGHAVFALLTGGVFLFFAAAAVSLVKEKKFSRKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA