Click here to switch to the map view.

The map label for this gene is ychK [C]

Identifier: 150005808

GI number: 150005808

Start: 4137945

End: 4140254

Strand: Direct

Name: ychK [C]

Synonym: BVU_3301

Alternate gene names: 150005808

Gene position: 4137945-4140254 (Clockwise)

Preceding gene: 150005807

Following gene: 150005811

Centisome position: 80.14

GC content: 40.87

Gene sequence:

>2310_bases
ATGAAACATTATCTATATATACTTTTTCTTCTCTTTTTACTACTTCCTCCCATCCATGCACAGAAAGTGGGACTGGTACT
GAGCGGAGGAGGTGCCAAAGGCCTAACCCATATCGGCATTATCCGCGCATTAGAAGAAAACGGTATCCCCATAGATTATA
TTGCAGGCACATCCATGGGAGCCATTGTCGGTTCACTTTATGCCATGGGCTATTCTCCCGATGAAATGGAGGCTTTACTC
AAATCCGATGACTTCAAACGCTGGTATTCAGGTAATGTGGAAGAGAAATACATCTATTATTTCAAGAAAAATCCTCCAAC
ACCCGAATTTATCAACATCCGTATCTCCTTAAAAGACTCGCTGAAGAATGTCAAACCTCAGTTTTTGCCTACCAGCATTG
TAGATCCCATTCAGATGAATATTGTATTTCTGCAATTATTCGGTCAGGCAACAGCTGCAAGCAAGGCCAATTTTGACAGC
CTGTATATTCCCTTCCGCTGTATAGCTTCGGATGTGTACAACAAAAGACCACTGATATTGAAAAAAGGAGATCTGGGAGA
TGCCGTACGTGCCTCCATGAGTTTTCCTGCCATGTTCAAGCCTATCGAAATAGACTCGATACTGGCATACGACGGTGGCA
TTTACAATAATTTTCCAGTGAATGTAATGCGTGATACCTTCCATCCAGATATCATTATAGGAAGTGCCGTATCCGCCAAT
CCGGGCAAACCCAAGGAAGGTGACATTATGGGGCAACTGGAAAATATGATTATGCAAAAGACAGATTACTCTTTACCCGA
TTCCCTCGGCATCCTCATGACTTTTAAATATGATGATGTCAATTTAATGGACTTCCAGCGCTTTGACGAGTTGCATGACA
TTGGTTATAAACGTGCCATAGAAATGATGGACTCCATAAAAAGCCGAATTCATCGAAGAATCACCCCCGAACAAGTGAAA
GTTAAACGACTGGCCTATAAGAGCAATTTACCGGATTTCCGTTTCAAAAGAGTTAATATAACCGGTGCCAATGAACAGCA
AAAGCAATATATACAAAAAGAGTTTCATGAAAACGACTCCGATGTTTTCACTATGGAGGATGTCAAACGAGCATATTTCC
GTTTGTTGTCCGATAATATTATATCCGAAATCATTCCTCATGCCGTTTATAATGAGAAAGACCAAACCTACGACTTGAAT
CTTCAGGTCAAAATGGAGGCCAATCTCTCCGTTCGTGTCGGTGGAAACGTGTCTTCCAGTGGCTCCAATCAAGTCTATTT
TGGTGCTTCTTATCAAAACTTGAACTATTATTCAAAAGAATTTAATTTTGACGGACAGTTAGGCCGGGTCTACAATAATG
TACAACTTGCAGCACGAATCGATTTTCCAACCAAACTGCCTACATCTTATAAATTCATAGCCTCGATCTCTACCTTCGAT
TATTTCAAAGAAGCCAAATTCTTTTCCAACAAAGACAATCCGGCTTTCAACAAGAAAAGGGAAGAGTTTGTAAAATTGAA
GGTGTCATTACCGTTTCTAAGCCGTAAAAAAGCTGAATTCGGTGTGGGTATAGCCCGTATGGAGGACAGGTACTTCCAAA
CCAATATCATCGACTTCAGCGAAACAAAACATGATGAAAGCACTTATTCTATCTTCGGAGGCTCTATCGTATTGGAAGGA
AGTACCTTGAATGCCCGCCAATTTGCCACACAAGGAAGTCGTGAAAAAATGGCTGCACAAATTTTCACCGGCACAGAACA
TTTCAGATCCGGTATATCCAAAGTGACTAAAGGCACACCGGAGCCTTATAAAAAAGTACAATCCTGGCTTCAAGTTTCAT
ATCAGAACGAAACATACCATAAGGTAAGCCCTAAGTTTACTTTGGGAGCGTATCTGGAGGCATATTACTCATCCCGAAAT
TTCTCCAACAATTATACGGCTACATTAATGCAGGCAGGAGAATTCACTCCGACAGCCCATAGCAAAGTAACCTATAATGA
GGCTTTCCGTGCTAATCAATATGCCGGAGTCGGCACCATGCCCATCTACCAGTTAAGCGAGTCTTTTCAATTACGCGGAG
AATTTTATGGATTTATACCCATCTTTCCTATCAAGAAAGATGAATATGGACAAGCATATTACGGGAAAGCTTTCACAAAA
TTCGAATATCTTGGAGAAATTTCATTAGTCTTTCAATTATCGTTCGGTTCTATCAGTGCCTATGTAAATCACTATAGCTC
ACCGTCTAACGATTGGAATGTAGGTTTAACACTAGGCTGGCAGCTGTTTAATTCCCGTTTCGTCGAATAA

Upstream 100 bases:

>100_bases
GTCGGGAAGTTCATTTCCGGCGCTTTTTTATTCTAAAAAACGATTGGAAACGAAGATTTCTTTCTATATTTGGAGCGACA
CATACAAAGATTCGACATCC

Downstream 100 bases:

>100_bases
TTTTTAGAAAAAAGTTTAGTAAAACGCTTGCATTTTCAAAAAAAGTCCGTATCTTTGCACCCGTTAAAACGAAAGAACAA
TAAACAATGGCCGCGTAGCT

Product: putative patatin-like phospholipase

Products: NA

Alternate protein names: Serine Protease; Patatin-Like Phospholipase; Phospholipase Patatin Family; Outer Membrane Protein; Surface Antigen; Patatin-Like Phospholipase Family Protein; Esterase; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Phospholipase; Phospholipase Family Protein; Patatin-Like Protein Of Phospholipase Family Protein; Patatin-Like Phospholipase Family; Patatin Family Protein; Esterase Of Alpha-Beta Hydrolase Superfamily; Alpha-Beta Hydrolase Superfamily Esterase; Lysophospholipase; Periplasmic Esterase Or Lipase; Patatin Phospholipase; Patatin Family Outer Membrane Protein; Conserved Protein YqhO; Patatin-Like Lipid Acyl Hydrolase Protein; OMP85 Family Outer Membrane Protein; Phosphoesterase; Outer Membrane Protein/Esterase; Lipoprotein Transmembrane Protein; Phopholipase; Lipoprotein; Hybrid CAP Effector Domain/Patatin Phospholipase Protein

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MKHYLYILFLLFLLLPPIHAQKVGLVLSGGGAKGLTHIGIIRALEENGIPIDYIAGTSMGAIVGSLYAMGYSPDEMEALL
KSDDFKRWYSGNVEEKYIYYFKKNPPTPEFINIRISLKDSLKNVKPQFLPTSIVDPIQMNIVFLQLFGQATAASKANFDS
LYIPFRCIASDVYNKRPLILKKGDLGDAVRASMSFPAMFKPIEIDSILAYDGGIYNNFPVNVMRDTFHPDIIIGSAVSAN
PGKPKEGDIMGQLENMIMQKTDYSLPDSLGILMTFKYDDVNLMDFQRFDELHDIGYKRAIEMMDSIKSRIHRRITPEQVK
VKRLAYKSNLPDFRFKRVNITGANEQQKQYIQKEFHENDSDVFTMEDVKRAYFRLLSDNIISEIIPHAVYNEKDQTYDLN
LQVKMEANLSVRVGGNVSSSGSNQVYFGASYQNLNYYSKEFNFDGQLGRVYNNVQLAARIDFPTKLPTSYKFIASISTFD
YFKEAKFFSNKDNPAFNKKREEFVKLKVSLPFLSRKKAEFGVGIARMEDRYFQTNIIDFSETKHDESTYSIFGGSIVLEG
STLNARQFATQGSREKMAAQIFTGTEHFRSGISKVTKGTPEPYKKVQSWLQVSYQNETYHKVSPKFTLGAYLEAYYSSRN
FSNNYTATLMQAGEFTPTAHSKVTYNEAFRANQYAGVGTMPIYQLSESFQLRGEFYGFIPIFPIKKDEYGQAYYGKAFTK
FEYLGEISLVFQLSFGSISAYVNHYSSPSNDWNVGLTLGWQLFNSRFVE

Sequences:

>Translated_769_residues
MKHYLYILFLLFLLLPPIHAQKVGLVLSGGGAKGLTHIGIIRALEENGIPIDYIAGTSMGAIVGSLYAMGYSPDEMEALL
KSDDFKRWYSGNVEEKYIYYFKKNPPTPEFINIRISLKDSLKNVKPQFLPTSIVDPIQMNIVFLQLFGQATAASKANFDS
LYIPFRCIASDVYNKRPLILKKGDLGDAVRASMSFPAMFKPIEIDSILAYDGGIYNNFPVNVMRDTFHPDIIIGSAVSAN
PGKPKEGDIMGQLENMIMQKTDYSLPDSLGILMTFKYDDVNLMDFQRFDELHDIGYKRAIEMMDSIKSRIHRRITPEQVK
VKRLAYKSNLPDFRFKRVNITGANEQQKQYIQKEFHENDSDVFTMEDVKRAYFRLLSDNIISEIIPHAVYNEKDQTYDLN
LQVKMEANLSVRVGGNVSSSGSNQVYFGASYQNLNYYSKEFNFDGQLGRVYNNVQLAARIDFPTKLPTSYKFIASISTFD
YFKEAKFFSNKDNPAFNKKREEFVKLKVSLPFLSRKKAEFGVGIARMEDRYFQTNIIDFSETKHDESTYSIFGGSIVLEG
STLNARQFATQGSREKMAAQIFTGTEHFRSGISKVTKGTPEPYKKVQSWLQVSYQNETYHKVSPKFTLGAYLEAYYSSRN
FSNNYTATLMQAGEFTPTAHSKVTYNEAFRANQYAGVGTMPIYQLSESFQLRGEFYGFIPIFPIKKDEYGQAYYGKAFTK
FEYLGEISLVFQLSFGSISAYVNHYSSPSNDWNVGLTLGWQLFNSRFVE
>Mature_769_residues
MKHYLYILFLLFLLLPPIHAQKVGLVLSGGGAKGLTHIGIIRALEENGIPIDYIAGTSMGAIVGSLYAMGYSPDEMEALL
KSDDFKRWYSGNVEEKYIYYFKKNPPTPEFINIRISLKDSLKNVKPQFLPTSIVDPIQMNIVFLQLFGQATAASKANFDS
LYIPFRCIASDVYNKRPLILKKGDLGDAVRASMSFPAMFKPIEIDSILAYDGGIYNNFPVNVMRDTFHPDIIIGSAVSAN
PGKPKEGDIMGQLENMIMQKTDYSLPDSLGILMTFKYDDVNLMDFQRFDELHDIGYKRAIEMMDSIKSRIHRRITPEQVK
VKRLAYKSNLPDFRFKRVNITGANEQQKQYIQKEFHENDSDVFTMEDVKRAYFRLLSDNIISEIIPHAVYNEKDQTYDLN
LQVKMEANLSVRVGGNVSSSGSNQVYFGASYQNLNYYSKEFNFDGQLGRVYNNVQLAARIDFPTKLPTSYKFIASISTFD
YFKEAKFFSNKDNPAFNKKREEFVKLKVSLPFLSRKKAEFGVGIARMEDRYFQTNIIDFSETKHDESTYSIFGGSIVLEG
STLNARQFATQGSREKMAAQIFTGTEHFRSGISKVTKGTPEPYKKVQSWLQVSYQNETYHKVSPKFTLGAYLEAYYSSRN
FSNNYTATLMQAGEFTPTAHSKVTYNEAFRANQYAGVGTMPIYQLSESFQLRGEFYGFIPIFPIKKDEYGQAYYGKAFTK
FEYLGEISLVFQLSFGSISAYVNHYSSPSNDWNVGLTLGWQLFNSRFVE

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI260656039, Length=306, Percent_Identity=24.8366013071895, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI260656041, Length=306, Percent_Identity=24.8366013071895, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI116256487, Length=306, Percent_Identity=24.8366013071895, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI260656043, Length=306, Percent_Identity=24.8366013071895, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI260656037, Length=306, Percent_Identity=24.8366013071895, Blast_Score=84, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71997299, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71997289, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=232, Percent_Identity=28.0172413793103, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87690; Mature: 87690

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYLYILFLLFLLLPPIHAQKVGLVLSGGGAKGLTHIGIIRALEENGIPIDYIAGTSMG
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCHH
AIVGSLYAMGYSPDEMEALLKSDDFKRWYSGNVEEKYIYYFKKNPPTPEFINIRISLKDS
HHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEHHH
LKNVKPQFLPTSIVDPIQMNIVFLQLFGQATAASKANFDSLYIPFRCIASDVYNKRPLIL
HCCCCCCCCCHHHCCCHHHHEEEEEECCCHHHCCCCCCCEEEEHHHHHHHHHCCCCCEEE
KKGDLGDAVRASMSFPAMFKPIEIDSILAYDGGIYNNFPVNVMRDTFHPDIIIGSAVSAN
ECCCCCHHHHHCCCCCCCCCCCEECEEEEECCCCCCCCCCCHHHCCCCCCEEEECCCCCC
PGKPKEGDIMGQLENMIMQKTDYSLPDSLGILMTFKYDDVNLMDFQRFDELHDIGYKRAI
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
EMMDSIKSRIHRRITPEQVKVKRLAYKSNLPDFRFKRVNITGANEQQKQYIQKEFHENDS
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC
DVFTMEDVKRAYFRLLSDNIISEIIPHAVYNEKDQTYDLNLQVKMEANLSVRVGGNVSSS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEECCCCCCC
GSNQVYFGASYQNLNYYSKEFNFDGQLGRVYNNVQLAARIDFPTKLPTSYKFIASISTFD
CCCEEEEECCCCCCCCCHHCCCCCCCHHHHCCCEEEEEEECCCCCCCCCEEEEEEHHHHH
YFKEAKFFSNKDNPAFNKKREEFVKLKVSLPFLSRKKAEFGVGIARMEDRYFQTNIIDFS
HHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCHHCCCHHHCCCHHHHCCCEEEEEEEECC
ETKHDESTYSIFGGSIVLEGSTLNARQFATQGSREKMAAQIFTGTEHFRSGISKVTKGTP
CCCCCCCEEEEECCEEEEECCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC
EPYKKVQSWLQVSYQNETYHKVSPKFTLGAYLEAYYSSRNFSNNYTATLMQAGEFTPTAH
HHHHHHHHHHEEECCCCCEEECCCCEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC
SKVTYNEAFRANQYAGVGTMPIYQLSESFQLRGEFYGFIPIFPIKKDEYGQAYYGKAFTK
CEEEHHHHHCCCCCCCCCCCHHHHCCCCCEECCEEEEEEEEEECCCCCCCCCHHCCHHHH
FEYLGEISLVFQLSFGSISAYVNHYSSPSNDWNVGLTLGWQLFNSRFVE
HHHHCCEEEEEEEECCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHCCC
>Mature Secondary Structure
MKHYLYILFLLFLLLPPIHAQKVGLVLSGGGAKGLTHIGIIRALEENGIPIDYIAGTSMG
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCHH
AIVGSLYAMGYSPDEMEALLKSDDFKRWYSGNVEEKYIYYFKKNPPTPEFINIRISLKDS
HHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEHHH
LKNVKPQFLPTSIVDPIQMNIVFLQLFGQATAASKANFDSLYIPFRCIASDVYNKRPLIL
HCCCCCCCCCHHHCCCHHHHEEEEEECCCHHHCCCCCCCEEEEHHHHHHHHHCCCCCEEE
KKGDLGDAVRASMSFPAMFKPIEIDSILAYDGGIYNNFPVNVMRDTFHPDIIIGSAVSAN
ECCCCCHHHHHCCCCCCCCCCCEECEEEEECCCCCCCCCCCHHHCCCCCCEEEECCCCCC
PGKPKEGDIMGQLENMIMQKTDYSLPDSLGILMTFKYDDVNLMDFQRFDELHDIGYKRAI
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
EMMDSIKSRIHRRITPEQVKVKRLAYKSNLPDFRFKRVNITGANEQQKQYIQKEFHENDS
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC
DVFTMEDVKRAYFRLLSDNIISEIIPHAVYNEKDQTYDLNLQVKMEANLSVRVGGNVSSS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEECCCCCCC
GSNQVYFGASYQNLNYYSKEFNFDGQLGRVYNNVQLAARIDFPTKLPTSYKFIASISTFD
CCCEEEEECCCCCCCCCHHCCCCCCCHHHHCCCEEEEEEECCCCCCCCCEEEEEEHHHHH
YFKEAKFFSNKDNPAFNKKREEFVKLKVSLPFLSRKKAEFGVGIARMEDRYFQTNIIDFS
HHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCHHCCCHHHCCCHHHHCCCEEEEEEEECC
ETKHDESTYSIFGGSIVLEGSTLNARQFATQGSREKMAAQIFTGTEHFRSGISKVTKGTP
CCCCCCCEEEEECCEEEEECCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC
EPYKKVQSWLQVSYQNETYHKVSPKFTLGAYLEAYYSSRNFSNNYTATLMQAGEFTPTAH
HHHHHHHHHHEEECCCCCEEECCCCEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC
SKVTYNEAFRANQYAGVGTMPIYQLSESFQLRGEFYGFIPIFPIKKDEYGQAYYGKAFTK
CEEEHHHHHCCCCCCCCCCCHHHHCCCCCEECCEEEEEEEEEECCCCCCCCCHHCCHHHH
FEYLGEISLVFQLSFGSISAYVNHYSSPSNDWNVGLTLGWQLFNSRFVE
HHHHCCEEEEEEEECCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA