Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

Click here to switch to the map view.

The map label for this gene is mpb83

Identifier: 148824063

GI number: 148824063

Start: 3195435

End: 3196097

Strand: Direct

Name: mpb83

Synonym: TBFG_12888

Alternate gene names: 148824063

Gene position: 3195435-3196097 (Clockwise)

Preceding gene: 148824062

Following gene: 148824064

Centisome position: 72.22

GC content: 63.5

Gene sequence:

>663_bases
ATGATCAACGTTCAGGCCAAACCGGCCGCAGCAGCGAGCCTCGCAGCCATCGCGATTGCGTTCTTAGCGGGTTGTTCGAG
CACCAAACCCGTGTCGCAAGACACCAGCCCGAAACCGGCGACCAGCCCGGCGGCGCCCGTTACCACGGCGGCAATGGCTG
ACCCCGCAGCGGACCTGATTGGTCGTGGGTGCGCGCAATACGCGGCGCAAAATCCCACCGGTCCCGGATCGGTGGCCGGA
ATGGCGCAAGACCCGGTCGCTACCGCGGCTTCCAACAACCCGATGCTCAGTACCCTGACCTCGGCTCTGTCGGGCAAGCT
GAACCCGGATGTGAATCTGGTCGACACCCTCAACGGCGGCGAGTACACCGTTTTCGCCCCCACCAACGCCGCATTCGACA
AGCTGCCGGCGGCCACTATCGATCAACTCAAGACTGACGCCAAGCTGCTCAGCAGCATCCTGACCTACCACGTGATAGCC
GGCCAGGCGAGTCCGAGCAGGATCGACGGCACCCATCAGACCCTGCAAGGTGCCGACCTGACGGTGATAGGCGCCCGCGA
CGACCTCATGGTCAACAACGCCGGTTTGGTATGTGGCGGAGTTCACACCGCCAACGCGACGGTGTACATGATCGATACGG
TGCTGATGCCCCCGGCACAGTAA

Upstream 100 bases:

>100_bases
GACGGTCAGACCCATCTATAACCGGCCCCACTCCGAATCACTGGTGTCCACCCAGGAGGACGGCGTTCAACGCCGCCGCA
GAAGCAAAGGAATCGAAGCG

Downstream 100 bases:

>100_bases
CGTTCGGCGCGGTCAAGGCGAGGCAGCCCGTGTAGGCGGTTTGCCTCGCTCATCCGGCGGCTTCGTGCCGATAGATCACG
TGATATCCCAAGCGCATGAC

Product: cell surface lipoprotein mpt83 (lipoprotein P23)

Products: NA

Alternate protein names: Lipoprotein p23

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLIGRGCAQYAAQNPTGPGSVAG
MAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIA
GQASPSRIDGTHQTLQGADLTVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ

Sequences:

>Translated_220_residues
MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLIGRGCAQYAAQNPTGPGSVAG
MAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIA
GQASPSRIDGTHQTLQGADLTVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ
>Mature_220_residues
MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLIGRGCAQYAAQNPTGPGSVAG
MAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIA
GQASPSRIDGTHQTLQGADLTVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MP83_MYCBO (P0CAX7)

Other databases:

- EMBL:   D64165
- EMBL:   BX248344
- RefSeq:   NP_856543.1
- ProteinModelPortal:   P0CAX7
- SMR:   P0CAX7
- EnsemblBacteria:   EBMYCT00000016837
- GeneID:   1092210
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb2898
- GeneTree:   EBGT00050000018549
- HOGENOM:   HBG750250
- OMA:   AGMAADP
- ProtClustDB:   CLSK792135
- InterPro:   IPR000782
- Gene3D:   G3DSA:2.30.180.10
- SMART:   SM00554

Pfam domain/function: PF02469 Fasciclin; SSF82153 BIgH3_FAS1

EC number: NA

Molecular weight: Translated: 22070; Mature: 22070

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50213 FAS1; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHH
GRGCAQYAAQNPTGPGSVAGMAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGG
HHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC
EYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADL
CEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCE
TVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ
EEEECCCCEEEECCCEEECCEEECCEEEEEEEEEECCCCC
>Mature Secondary Structure
MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHH
GRGCAQYAAQNPTGPGSVAGMAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGG
HHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC
EYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADL
CEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCE
TVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ
EEEECCCCEEEECCCEEECCEEECCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8633205; 12788972