Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is dhaA [H]
Identifier: 148823774
GI number: 148823774
Start: 2916956
End: 2917858
Strand: Direct
Name: dhaA [H]
Synonym: TBFG_12599
Alternate gene names: 148823774
Gene position: 2916956-2917858 (Clockwise)
Preceding gene: 148823772
Following gene: 148823776
Centisome position: 65.93
GC content: 63.57
Gene sequence:
>903_bases ATGACAGCATTCGGCGTCGAGCCCTACGGGCAGCCGAAGTACCTAGAAATCGCCGGGAAGCGCATGGCGTATATCGACGA AGGCAAGGGTGACGCCATCGTCTTTCAGCACGGCAACCCCACGTCGTCTTACTTGTGGCGCAACATCATGCCGCACTTGG AAGGGCTGGGCCGGCTGGTGGCCTGCGATCTGATCGGGATGGGCGCGTCGGACAAGCTCAGCCCATCGGGACCCGACCGC TATAGCTATGGCGAGCAACGAGACTTTTTGTTCGCGCTCTGGGATGCGCTCGACCTCGGCGACCACGTGGTACTGGTGCT GCACGACTGGGGCTCGGCGCTCGGCTTCGACTGGGCTAACCAGCATCGCGACCGAGTGCAGGGGATCGCGTTCATGGAAG CGATCGTCACCCCGATGACGTGGGCGGACTGGCCGCCGGCCGTGCGGGGTGTGTTCCAGGGTTTCCGATCGCCTCAAGGC GAGCCAATGGCGTTGGAGCACAACATCTTTGTCGAACGGGTGCTGCCCGGGGCGATCCTGCGACAGCTCAGCGACGAGGA AATGAACCACTATCGGCGGCCATTCGTGAACGGCGGCGAGGACCGTCGCCCCACGTTGTCGTGGCCACGAAACCTTCCAA TCGACGGTGAGCCCGCCGAGGTCGTCGCGTTGGTCAACGAGTACCGGAGCTGGCTCGAGGAAACCGACATGCCGAAACTG TTCATCAACGCCGAGCCCGGCGCGATCATCACCGGCCGCATCCGTGACTATGTCAGGAGCTGGCCCAACCAGACCGAAAT CACAGTGCCCGGCGTGCATTTCGTTCAGGAGGACAGCCCAGAGGAAATCGGTGCGGCCATAGCACAGTTCGTCCGGCGGC TCCGGTCGGCGGCCGGCGTCTGA
Upstream 100 bases:
>100_bases TTCGAACAACCGTTCTATACTTTGTCAACGCTGGCCGCTACCGAGCGCCGCACAGGATGTGATATGCCATCTCTGCCCGC ACAGACAGGAGCCAGGCCTT
Downstream 100 bases:
>100_bases CCGCAACCGGGCCTCATGCTAGGCCACCGGCGACCGACGGACTTCCCGCGCGAGCCGCTCCAAAAGCCTCAGCCGCTCGG GGTGGTCGGCTCGTCAAACG
Product: haloalkane dehalogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTAFGVEPYGQPKYLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDR YSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQG EPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKL FINAEPGAIITGRIRDYVRSWPNQTEITVPGVHFVQEDSPEEIGAAIAQFVRRLRSAAGV
Sequences:
>Translated_300_residues MTAFGVEPYGQPKYLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDR YSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQG EPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKL FINAEPGAIITGRIRDYVRSWPNQTEITVPGVHFVQEDSPEEIGAAIAQFVRRLRSAAGV >Mature_299_residues TAFGVEPYGQPKYLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRY SYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGE PMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLF INAEPGAIITGRIRDYVRSWPNQTEITVPGVHFVQEDSPEEIGAAIAQFVRRLRSAAGV
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.5 [H]
Molecular weight: Translated: 33729; Mature: 33597
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFGVEPYGQPKYLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLV CCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH ACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWAN HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCHHH QHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAIL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCHHHH RQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKL HHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE FINAEPGAIITGRIRDYVRSWPNQTEITVPGVHFVQEDSPEEIGAAIAQFVRRLRSAAGV EEECCCCEEEEHHHHHHHHCCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAFGVEPYGQPKYLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLV CCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH ACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWAN HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCHHH QHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAIL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCHHHH RQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKL HHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE FINAEPGAIITGRIRDYVRSWPNQTEITVPGVHFVQEDSPEEIGAAIAQFVRRLRSAAGV EEECCCCEEEEHHHHHHHHCCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]