Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148823765
Identifier: 148823765
GI number: 148823765
Start: 2907829
End: 2908218
Strand: Direct
Name: 148823765
Synonym: TBFG_12590
Alternate gene names: NA
Gene position: 2907829-2908218 (Clockwise)
Preceding gene: 148823762
Following gene: 148823768
Centisome position: 65.72
GC content: 67.18
Gene sequence:
>390_bases GTGGCTACCTGGGACGACGTCGCCCGTATCGTGGGTGGGCTGCCGCTGACCGCGGAGCAGGCACCGCACGACTGGCGTGT TGGCCGCAAGCTGCTGGCCTGGGAACGGCCGCTGCGCAAGTCCGACCGCGAAGCCCTGACCAGGGCCGGATCGGAGCCAC CGTCCGGCGACATCGTCGGTGTCCGAGTGTCGGACGAGGGGGTGAAGTTCGCCTTGATTGCCGACGAGCCGGGCGTGTAC TTCACCACCCCGCATTTCGACGGCTATCCAGCGGTGCTGGTCAGGCTGGCCGAGATCGAGGTTCGCGACCTCGAGGAGTT GATCACCGAGGCCTGGCTGATGCAGGCGCCGAAGCAGCTGGTGCAGGCGTTTCTCGCCAATTCAGGCTGA
Upstream 100 bases:
>100_bases GCTACCTCCTGGCTGATCACATCACACGCCGGCGGCTCGTCCGGCGCGATCGTCGCGCAATGTGGCGCCAAGCGCACCAT AGCCGGAGCACAATTAAAGC
Downstream 100 bases:
>100_bases CATGCCCGACGGGCCCGGGCGTTCGATTACCCGTTGTAGATCGGTGACACACGCTTGGACGATATCGGCGCGCACCACTT CGTTGCTGCCACAAGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MATWDDVARIVGGLPLTAEQAPHDWRVGRKLLAWERPLRKSDREALTRAGSEPPSGDIVGVRVSDEGVKFALIADEPGVY FTTPHFDGYPAVLVRLAEIEVRDLEELITEAWLMQAPKQLVQAFLANSG
Sequences:
>Translated_129_residues MATWDDVARIVGGLPLTAEQAPHDWRVGRKLLAWERPLRKSDREALTRAGSEPPSGDIVGVRVSDEGVKFALIADEPGVY FTTPHFDGYPAVLVRLAEIEVRDLEELITEAWLMQAPKQLVQAFLANSG >Mature_128_residues ATWDDVARIVGGLPLTAEQAPHDWRVGRKLLAWERPLRKSDREALTRAGSEPPSGDIVGVRVSDEGVKFALIADEPGVYF TTPHFDGYPAVLVRLAEIEVRDLEELITEAWLMQAPKQLVQAFLANSG
Specific function: Unknown
COG id: COG3801
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2570_MYCTU (P65013)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: A70724 - RefSeq: NP_217086.1 - RefSeq: NP_337145.1 - ProteinModelPortal: P65013 - EnsemblBacteria: EBMYCT00000000385 - EnsemblBacteria: EBMYCT00000071535 - GeneID: 887377 - GeneID: 925656 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2646 - KEGG: mtu:Rv2570 - TIGR: MT2646 - TubercuList: Rv2570 - GeneTree: EBGT00050000017967 - HOGENOM: HBG695201 - OMA: VADEGVK - ProtClustDB: CLSK872074 - InterPro: IPR007351
Pfam domain/function: PF04237 DUF419
EC number: NA
Molecular weight: Translated: 14264; Mature: 14133
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATWDDVARIVGGLPLTAEQAPHDWRVGRKLLAWERPLRKSDREALTRAGSEPPSGDIVG CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEE VRVSDEGVKFALIADEPGVYFTTPHFDGYPAVLVRLAEIEVRDLEELITEAWLMQAPKQL EEECCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQAFLANSG HHHHHHCCC >Mature Secondary Structure ATWDDVARIVGGLPLTAEQAPHDWRVGRKLLAWERPLRKSDREALTRAGSEPPSGDIVG CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEE VRVSDEGVKFALIADEPGVYFTTPHFDGYPAVLVRLAEIEVRDLEELITEAWLMQAPKQL EEECCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQAFLANSG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036