Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148823762
Identifier: 148823762
GI number: 148823762
Start: 2903112
End: 2905766
Strand: Direct
Name: 148823762
Synonym: TBFG_12587
Alternate gene names: NA
Gene position: 2903112-2905766 (Clockwise)
Preceding gene: 148823761
Following gene: 148823765
Centisome position: 65.62
GC content: 66.18
Gene sequence:
>2655_bases ATGGCACCCTCAGCTTCTGCCGCTACCAACGGCTACGACGTCGACCGCCTGCTGGCCGGATACCGCACCGCGCGTGCCCA GGAAACACTGTTCGACCTGCGGGACGGCCCGGGAGCCGGCTATGACGAATTCGTCGACGACGACGGCAACGTGCGACCGA CCTGGACCGAGCTCGCCGACGCGGTCGCCGAACGTGGCAAGGCGGGGCTGGACCGGCTGCGCTCGGTGGTGCACAGCCTG ATCGACCACGACGGCATCACCTACACCGCAATCGATGCACACCGGGACGCGCTGACCGGCGACCATGATCTGGAACCGGG GCCGTGGCGCCTGGACCCGCTGCCGCTGGTGATTTCCGCGGCCGATTGGGAAGTGCTGGAGGCCGGCTTGGTGCAGCGAT CGCGCTTGCTTGATGCCATCCTCGCGGACTTGTACGGGCCCCGCAGCATGCTCACCGAGGGTGTCCTGCCGCCAGAGATG CTGTTCGCTCATCCCGGCTACGTGCGTGCCGCTAACGGGATCCAGATGCCTGGGCGCCACCAACTTTTCATGCACGCCTG TGATCTCAGCCGGTTGCCCGACGGGACTTTTCAGGTCAACGCCGACTGGACGCAGGCGCCCTCGGGCTCCGGCTATGCGA TGGCCGATCGACGTGTCGTCGCGCACGCCGTTCCCGATCTGTACGAGGAACTGGCGCCGCGACCCACCACACCGTTCGCC CAGGCGCTCCGGCTGGCACTGATTGACGCGGCACCCGATGTCGCCCAAGACCCCGTCGTGGTGGTGCTCAGCCCGGGCAT CTATTCAGAAACCGCTTTCGACCAGGCGTATCTCGCAACGCTGCTGGGTTTCCCGCTAGTGGAAAGCGCGGACCTGGTGG TGCGCGACGGCAAGCTGTGGATGCGTTCGCTGGGCACGCTGAAACGCGTTGACGTCGTTCTTCGCCGCGTCGATGCCCAC TACGCGGATCCACTGGATCTACGCGCCGATTCCAGGCTCGGTGTCGTCGGTTTGGTGGAAGCGCAGCACCGCGGAACAGT GACCGTCGTCAACACGCTGGGCAGCGGCATCCTGGAGAACCCAGGCCTGTTGCGCTTCCTGCCGCAGCTATCCGAGCGCC TGCTCGACGAAAGCCCGCTGCTGCACACCGCTCCGGTCTACTGGGGCGGCATCGCCAGCGAACGCTCACACCTACTGGCC AATGTCTCGTCGCTGCTGATCAAAAGCACTGTCAGCGGGGAAACTCTTGTCGGACCGACACTTTCGTCTGCACAACTGGC CGATCTGGCAGTGCGTATCGAGGCGATGCCGTGGCAGTGGGTGGGCCAGGAGCTGCCGCAGTTCTCGTCGGCGCCCACCA ACCATGCCGGGGTGTTGTCGTCCGCCGGGGTAGGCATGCGACTGTTCACCGTTGCCCAGCGCAGTGGTTACGCGCCGATG ATCGGCGGCCTCGGCTATGTACTGGCGCCCGGTCCTGCCGCATATACGCTGAAAACCGTTGCAGCAAAAGATATCTGGGT GCGCCCAACGGAGCGTGCGCATGCCGAGGTGATAACGGTGCCGGTGTTGGCGCCGCCGGCCAAAACCGGAGCGGGCACCT GGGCGGTCAGCTCTCCGCGCGTGCTGTCCGATCTGTTCTGGATGGGCCGCTACGGCGAGCGCGCGGAGAACATGGCCCGG CTGCTGATCGTCACCCGCGAGCGCTACCACGTTTTCCGGCACCAGCAGGACACCGATGAAAGCGAGTGCGTGCCGGTGCT GATGGCCGCGCTGGGCAAGATCACCGGATATGACACCGCAACTGGCGCCGGCAGCGCTTACGACCGGGCCGACATGATCG CGGTCGCCCCGTCGACACTGTGGTCTTTGACCGTGGATCCGGACCGGCCGGGTTCCCTTGTTCAGTCGGTGGAGGGGCTG GCACTTGCCGCCCGGGCGGTGCGCGACCAGCTGTCCAACGACACCTGGATGGTGCTGGCCAATGTGGAACGCGCGGTGGA GCACAAGTCCGACCCGCCGCAGTCGCTGGCAGAGGCGGACGCCGTGCTTGCGTCGGCTCAGGCGGAGACGCTAGCCGGCA TGCTGACGTTGTCCGGGGTGGCCGGCGAGTCGATGGTGCACGACGTGGGCTGGACGATGATGGACATCGGCAAGCGTATC GAACGCGGCCTGTGGCTGACCGCGTTGCTACAAGCCACGTTGAGCACCGTGCGCCACCCCGCCGCCGAGCAAGCCATCAT CGAGGCAACCCTGGTGGCGTGTGAATCGTCGGTTATCTATCGGCGCCGCACCGTAGGCAAGTTCAGTGTCGCCGCTGTGA CCGAGCTGATGTTGTTCGACGCCCAGAACCCGCGCTCGCTGGTGTATCAGCTGGAACGGCTGCGCGCCGACCTGAAAGAC CTGCCTGGCTCGTCGGGATCGTCTCGTCCGGAACGGATGGTGGACGAGATGAACACCCGCCTGCGCCGCTCACACCCAGA AGAGTTGGAAGAGGTCTCCGCCGACGGGCTGCGCGCCGAGTTGGCGGAACTGCTGGCCGGGATACATGCCTCGCTGCGTG ACGTGGCCGACGTCCTCACCGCCACTCAGTTGGCGTTGCCCGGCGGCATGCAACCGCTGTGGGGTCCAGACCAACGGCGG GTGATGCCGGCCTAA
Upstream 100 bases:
>100_bases TCGACCTGTCCGACATCCGGGAGAAACAGGCCAGGATATCCACCGATATCGGCGCGCCGGGCATCCTCGACCTACGACGC GTGCGTACCGTGCAACAGTA
Downstream 100 bases:
>100_bases ACGGTGCGACGGCTGTGAGCCGGCTCGAAATCCGGGGCCACCTCGTCGACGACGGTGTGGATGAACCGCATCTTCTCCAG CACAGCGGCCGGCAGCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 884; Mature: 883
Protein sequence:
>884_residues MAPSASAATNGYDVDRLLAGYRTARAQETLFDLRDGPGAGYDEFVDDDGNVRPTWTELADAVAERGKAGLDRLRSVVHSL IDHDGITYTAIDAHRDALTGDHDLEPGPWRLDPLPLVISAADWEVLEAGLVQRSRLLDAILADLYGPRSMLTEGVLPPEM LFAHPGYVRAANGIQMPGRHQLFMHACDLSRLPDGTFQVNADWTQAPSGSGYAMADRRVVAHAVPDLYEELAPRPTTPFA QALRLALIDAAPDVAQDPVVVVLSPGIYSETAFDQAYLATLLGFPLVESADLVVRDGKLWMRSLGTLKRVDVVLRRVDAH YADPLDLRADSRLGVVGLVEAQHRGTVTVVNTLGSGILENPGLLRFLPQLSERLLDESPLLHTAPVYWGGIASERSHLLA NVSSLLIKSTVSGETLVGPTLSSAQLADLAVRIEAMPWQWVGQELPQFSSAPTNHAGVLSSAGVGMRLFTVAQRSGYAPM IGGLGYVLAPGPAAYTLKTVAAKDIWVRPTERAHAEVITVPVLAPPAKTGAGTWAVSSPRVLSDLFWMGRYGERAENMAR LLIVTRERYHVFRHQQDTDESECVPVLMAALGKITGYDTATGAGSAYDRADMIAVAPSTLWSLTVDPDRPGSLVQSVEGL ALAARAVRDQLSNDTWMVLANVERAVEHKSDPPQSLAEADAVLASAQAETLAGMLTLSGVAGESMVHDVGWTMMDIGKRI ERGLWLTALLQATLSTVRHPAAEQAIIEATLVACESSVIYRRRTVGKFSVAAVTELMLFDAQNPRSLVYQLERLRADLKD LPGSSGSSRPERMVDEMNTRLRRSHPEELEEVSADGLRAELAELLAGIHASLRDVADVLTATQLALPGGMQPLWGPDQRR VMPA
Sequences:
>Translated_884_residues MAPSASAATNGYDVDRLLAGYRTARAQETLFDLRDGPGAGYDEFVDDDGNVRPTWTELADAVAERGKAGLDRLRSVVHSL IDHDGITYTAIDAHRDALTGDHDLEPGPWRLDPLPLVISAADWEVLEAGLVQRSRLLDAILADLYGPRSMLTEGVLPPEM LFAHPGYVRAANGIQMPGRHQLFMHACDLSRLPDGTFQVNADWTQAPSGSGYAMADRRVVAHAVPDLYEELAPRPTTPFA QALRLALIDAAPDVAQDPVVVVLSPGIYSETAFDQAYLATLLGFPLVESADLVVRDGKLWMRSLGTLKRVDVVLRRVDAH YADPLDLRADSRLGVVGLVEAQHRGTVTVVNTLGSGILENPGLLRFLPQLSERLLDESPLLHTAPVYWGGIASERSHLLA NVSSLLIKSTVSGETLVGPTLSSAQLADLAVRIEAMPWQWVGQELPQFSSAPTNHAGVLSSAGVGMRLFTVAQRSGYAPM IGGLGYVLAPGPAAYTLKTVAAKDIWVRPTERAHAEVITVPVLAPPAKTGAGTWAVSSPRVLSDLFWMGRYGERAENMAR LLIVTRERYHVFRHQQDTDESECVPVLMAALGKITGYDTATGAGSAYDRADMIAVAPSTLWSLTVDPDRPGSLVQSVEGL ALAARAVRDQLSNDTWMVLANVERAVEHKSDPPQSLAEADAVLASAQAETLAGMLTLSGVAGESMVHDVGWTMMDIGKRI ERGLWLTALLQATLSTVRHPAAEQAIIEATLVACESSVIYRRRTVGKFSVAAVTELMLFDAQNPRSLVYQLERLRADLKD LPGSSGSSRPERMVDEMNTRLRRSHPEELEEVSADGLRAELAELLAGIHASLRDVADVLTATQLALPGGMQPLWGPDQRR VMPA >Mature_883_residues APSASAATNGYDVDRLLAGYRTARAQETLFDLRDGPGAGYDEFVDDDGNVRPTWTELADAVAERGKAGLDRLRSVVHSLI DHDGITYTAIDAHRDALTGDHDLEPGPWRLDPLPLVISAADWEVLEAGLVQRSRLLDAILADLYGPRSMLTEGVLPPEML FAHPGYVRAANGIQMPGRHQLFMHACDLSRLPDGTFQVNADWTQAPSGSGYAMADRRVVAHAVPDLYEELAPRPTTPFAQ ALRLALIDAAPDVAQDPVVVVLSPGIYSETAFDQAYLATLLGFPLVESADLVVRDGKLWMRSLGTLKRVDVVLRRVDAHY ADPLDLRADSRLGVVGLVEAQHRGTVTVVNTLGSGILENPGLLRFLPQLSERLLDESPLLHTAPVYWGGIASERSHLLAN VSSLLIKSTVSGETLVGPTLSSAQLADLAVRIEAMPWQWVGQELPQFSSAPTNHAGVLSSAGVGMRLFTVAQRSGYAPMI GGLGYVLAPGPAAYTLKTVAAKDIWVRPTERAHAEVITVPVLAPPAKTGAGTWAVSSPRVLSDLFWMGRYGERAENMARL LIVTRERYHVFRHQQDTDESECVPVLMAALGKITGYDTATGAGSAYDRADMIAVAPSTLWSLTVDPDRPGSLVQSVEGLA LAARAVRDQLSNDTWMVLANVERAVEHKSDPPQSLAEADAVLASAQAETLAGMLTLSGVAGESMVHDVGWTMMDIGKRIE RGLWLTALLQATLSTVRHPAAEQAIIEATLVACESSVIYRRRTVGKFSVAAVTELMLFDAQNPRSLVYQLERLRADLKDL PGSSGSSRPERMVDEMNTRLRRSHPEELEEVSADGLRAELAELLAGIHASLRDVADVLTATQLALPGGMQPLWGPDQRRV MPA
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 95478; Mature: 95347
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSASAATNGYDVDRLLAGYRTARAQETLFDLRDGPGAGYDEFVDDDGNVRPTWTELAD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHH AVAERGKAGLDRLRSVVHSLIDHDGITYTAIDAHRDALTGDHDLEPGPWRLDPLPLVISA HHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCCCEECCCCCEEEEC ADWEVLEAGLVQRSRLLDAILADLYGPRSMLTEGVLPPEMLFAHPGYVRAANGIQMPGRH CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCEEECCCCCCCCCH QLFMHACDLSRLPDGTFQVNADWTQAPSGSGYAMADRRVVAHAVPDLYEELAPRPTTPFA HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHH QALRLALIDAAPDVAQDPVVVVLSPGIYSETAFDQAYLATLLGFPLVESADLVVRDGKLW HHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHH MRSLGTLKRVDVVLRRVDAHYADPLDLRADSRLGVVGLVEAQHRGTVTVVNTLGSGILEN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHCCCCCCC PGLLRFLPQLSERLLDESPLLHTAPVYWGGIASERSHLLANVSSLLIKSTVSGETLVGPT CCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCC LSSAQLADLAVRIEAMPWQWVGQELPQFSSAPTNHAGVLSSAGVGMRLFTVAQRSGYAPM CCCHHHHHHHEEEECCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCEEHHHHHHCCCCCH IGGLGYVLAPGPAAYTLKTVAAKDIWVRPTERAHAEVITVPVLAPPAKTGAGTWAVSSPR HCCCCEEECCCCCHHHHHHHHHCCEEECCCCCCCCEEEEEEEECCCCCCCCCCEECCCCH VLSDLFWMGRYGERAENMARLLIVTRERYHVFRHQQDTDESECVPVLMAALGKITGYDTA HHHHHHHHCCCCHHHHHHHHHHEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC TGAGSAYDRADMIAVAPSTLWSLTVDPDRPGSLVQSVEGLALAARAVRDQLSNDTWMVLA CCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE NVERAVEHKSDPPQSLAEADAVLASAQAETLAGMLTLSGVAGESMVHDVGWTMMDIGKRI CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHH ERGLWLTALLQATLSTVRHPAAEQAIIEATLVACESSVIYRRRTVGKFSVAAVTELMLFD HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC AQNPRSLVYQLERLRADLKDLPGSSGSSRPERMVDEMNTRLRRSHPEELEEVSADGLRAE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH LAELLAGIHASLRDVADVLTATQLALPGGMQPLWGPDQRRVMPA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure APSASAATNGYDVDRLLAGYRTARAQETLFDLRDGPGAGYDEFVDDDGNVRPTWTELAD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHH AVAERGKAGLDRLRSVVHSLIDHDGITYTAIDAHRDALTGDHDLEPGPWRLDPLPLVISA HHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCCCEECCCCCEEEEC ADWEVLEAGLVQRSRLLDAILADLYGPRSMLTEGVLPPEMLFAHPGYVRAANGIQMPGRH CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCEEECCCCCCCCCH QLFMHACDLSRLPDGTFQVNADWTQAPSGSGYAMADRRVVAHAVPDLYEELAPRPTTPFA HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHH QALRLALIDAAPDVAQDPVVVVLSPGIYSETAFDQAYLATLLGFPLVESADLVVRDGKLW HHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHH MRSLGTLKRVDVVLRRVDAHYADPLDLRADSRLGVVGLVEAQHRGTVTVVNTLGSGILEN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHCCCCCCC PGLLRFLPQLSERLLDESPLLHTAPVYWGGIASERSHLLANVSSLLIKSTVSGETLVGPT CCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCC LSSAQLADLAVRIEAMPWQWVGQELPQFSSAPTNHAGVLSSAGVGMRLFTVAQRSGYAPM CCCHHHHHHHEEEECCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCEEHHHHHHCCCCCH IGGLGYVLAPGPAAYTLKTVAAKDIWVRPTERAHAEVITVPVLAPPAKTGAGTWAVSSPR HCCCCEEECCCCCHHHHHHHHHCCEEECCCCCCCCEEEEEEEECCCCCCCCCCEECCCCH VLSDLFWMGRYGERAENMARLLIVTRERYHVFRHQQDTDESECVPVLMAALGKITGYDTA HHHHHHHHCCCCHHHHHHHHHHEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC TGAGSAYDRADMIAVAPSTLWSLTVDPDRPGSLVQSVEGLALAARAVRDQLSNDTWMVLA CCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE NVERAVEHKSDPPQSLAEADAVLASAQAETLAGMLTLSGVAGESMVHDVGWTMMDIGKRI CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHH ERGLWLTALLQATLSTVRHPAAEQAIIEATLVACESSVIYRRRTVGKFSVAAVTELMLFD HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC AQNPRSLVYQLERLRADLKDLPGSSGSSRPERMVDEMNTRLRRSHPEELEEVSADGLRAE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH LAELLAGIHASLRDVADVLTATQLALPGGMQPLWGPDQRRVMPA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]