| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is pkn1 [H]
Identifier: 148663567
GI number: 148663567
Start: 4154060
End: 4155337
Strand: Reverse
Name: pkn1 [H]
Synonym: MRA_3739
Alternate gene names: 148663567
Gene position: 4155337-4154060 (Counterclockwise)
Preceding gene: 148663568
Following gene: 148663566
Centisome position: 94.01
GC content: 68.78
Gene sequence:
>1278_bases GTGACTTCACCCGAGCAGCTGGCTTGTCATCTGGCGCGGGCGCGGGCGCGGACGTTGCGGCTGGTCGACTTCGACGATGC CGAGCTTTGCTGCCAGTATGACCCGTTGATGAGCCCGCTGGTGTGGGACCTGGCACACATCGGTCAGCAGGAGGAGTTGT GGCTGCTACGCGGCGGCGACCCAGGCCAGCCCGGGCTTTTGCCGCCGGCGGTCGAGGGTCTCTACGACGCCTTCGAGCAT TCCCGCGCCAGTCGCGTGGAACTGCCGTTGCTGTCCCCGGCGCGGGCGCGGTCCTACTGCGCAACGGTGCGCTCCGCTGC GCTGGATGCCCTTGCCGCTCTACCTGAAGACGGCGACAGCTTCGTGTTCGCGATGGTGATCAGCCACGAAAACCAGCACG ACGAAACCATGCTGCAGGCCTTGAACCTACGGACCGGCTCGCCACTGTTGGCCGCGACTTCCGCCCTGCCCGCCGGACGG CCGAGGATGGCCGGAACGTCGGTGCTGGTAGCCGGCGGCCCGTTCGTGCTGGGCGTGGACGCCGCGGACGAACCGTGCTC ATTGGACAACGAACGTCCGGCTCACGTCGTCGACGTGCCCGCATTCCGGATCGGCCGGGTTCCGGTCACCAACGGTGAAT GGCAAGACTTCATCGACGACGGCGGTTACACCCAGTCGCGGTGGTGGTCGGAACGTGGCTGGCAGCACCGCCAGCGCGCG GGGCTGACCGCTCCGCAATTCTGGAGGTCGGGCGGGCGGACGCGGACCCGGTTCGGGCACGTCGAGGACATTCCCGCCGA TGAGCCGGTGCAGCATGTCAGCTACTTTGAGGCCGAGGCGTACGCCGCCTGGGCAGGCGCGCGGTTGCCCACCGAGGTGG AGTGGGAGAAGGCTTGCGCGTGGGATCCGGCGACTGGTTCCCGCCGCCGCTACCCGTGGGGAACCGAGGAGCCCACAGAC ACCTATGCCAACCTGGGCGGTCAAACGCTGCGCCCCGCGCCGGTGGGTGCCTACCCGGCCGGGGCATCGGCGTGCGGGGC CGAGCAGATGCTGGGCGATGTCTGGGAGTGGACCACCTCGCCGTTGCGGCCCTGGCCGGGGTTCGTCCCGATGGTCTATG AGCGGTACTCACAGCCGTTCTTCGGCGGCGACTATCGCGTGCTACGCGGCGGCTCGTGGGCGGTGGAGCCGGCCATCCTG CGGCCCAGCTTCCGCAACTGGGATCACCCGTATCGCCGCCAGATCTTTGCCGGTGTCCGGTTGGCGTGGGACATCTGA
Upstream 100 bases:
>100_bases ACCACGTCGACAGGGGTGTTTGCCCGGCAGACGATTTCTCCGACCGGGTGATCGCGGGCGGCATCGCGTCAGCCGTCACC GGGATGATGCACGGGGCGTC
Downstream 100 bases:
>100_bases TGTGTCGTCACCTGGGGTGGCTCGGGGCACAGGTCGCGGTTTCTTCGTTGGTGCTGGACCCGCCGCAGGGTCTGCGGGTG CAGTCATATGCGCCGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTSPEQLACHLARARARTLRLVDFDDAELCCQYDPLMSPLVWDLAHIGQQEELWLLRGGDPGQPGLLPPAVEGLYDAFEH SRASRVELPLLSPARARSYCATVRSAALDALAALPEDGDSFVFAMVISHENQHDETMLQALNLRTGSPLLAATSALPAGR PRMAGTSVLVAGGPFVLGVDAADEPCSLDNERPAHVVDVPAFRIGRVPVTNGEWQDFIDDGGYTQSRWWSERGWQHRQRA GLTAPQFWRSGGRTRTRFGHVEDIPADEPVQHVSYFEAEAYAAWAGARLPTEVEWEKACAWDPATGSRRRYPWGTEEPTD TYANLGGQTLRPAPVGAYPAGASACGAEQMLGDVWEWTTSPLRPWPGFVPMVYERYSQPFFGGDYRVLRGGSWAVEPAIL RPSFRNWDHPYRRQIFAGVRLAWDI
Sequences:
>Translated_425_residues MTSPEQLACHLARARARTLRLVDFDDAELCCQYDPLMSPLVWDLAHIGQQEELWLLRGGDPGQPGLLPPAVEGLYDAFEH SRASRVELPLLSPARARSYCATVRSAALDALAALPEDGDSFVFAMVISHENQHDETMLQALNLRTGSPLLAATSALPAGR PRMAGTSVLVAGGPFVLGVDAADEPCSLDNERPAHVVDVPAFRIGRVPVTNGEWQDFIDDGGYTQSRWWSERGWQHRQRA GLTAPQFWRSGGRTRTRFGHVEDIPADEPVQHVSYFEAEAYAAWAGARLPTEVEWEKACAWDPATGSRRRYPWGTEEPTD TYANLGGQTLRPAPVGAYPAGASACGAEQMLGDVWEWTTSPLRPWPGFVPMVYERYSQPFFGGDYRVLRGGSWAVEPAIL RPSFRNWDHPYRRQIFAGVRLAWDI >Mature_424_residues TSPEQLACHLARARARTLRLVDFDDAELCCQYDPLMSPLVWDLAHIGQQEELWLLRGGDPGQPGLLPPAVEGLYDAFEHS RASRVELPLLSPARARSYCATVRSAALDALAALPEDGDSFVFAMVISHENQHDETMLQALNLRTGSPLLAATSALPAGRP RMAGTSVLVAGGPFVLGVDAADEPCSLDNERPAHVVDVPAFRIGRVPVTNGEWQDFIDDGGYTQSRWWSERGWQHRQRAG LTAPQFWRSGGRTRTRFGHVEDIPADEPVQHVSYFEAEAYAAWAGARLPTEVEWEKACAWDPATGSRRRYPWGTEEPTDT YANLGGQTLRPAPVGAYPAGASACGAEQMLGDVWEWTTSPLRPWPGFVPMVYERYSQPFFGGDYRVLRGGSWAVEPAILR PSFRNWDHPYRRQIFAGVRLAWDI
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI194248088, Length=266, Percent_Identity=33.0827067669173, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI194248087, Length=251, Percent_Identity=33.8645418326693, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI257470975, Length=222, Percent_Identity=30.6306306306306, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI257470977, Length=232, Percent_Identity=31.8965517241379, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI38202250, Length=232, Percent_Identity=31.8965517241379, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 47139; Mature: 47008
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPEQLACHLARARARTLRLVDFDDAELCCQYDPLMSPLVWDLAHIGQQEELWLLRGGD CCCHHHHHHHHHHHHHHEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCC PGQPGLLPPAVEGLYDAFEHSRASRVELPLLSPARARSYCATVRSAALDALAALPEDGDS CCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC FVFAMVISHENQHDETMLQALNLRTGSPLLAATSALPAGRPRMAGTSVLVAGGPFVLGVD EEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEC AADEPCSLDNERPAHVVDVPAFRIGRVPVTNGEWQDFIDDGGYTQSRWWSERGWQHRQRA CCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHCHHHHHHC GLTAPQFWRSGGRTRTRFGHVEDIPADEPVQHVSYFEAEAYAAWAGARLPTEVEWEKACA CCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC WDPATGSRRRYPWGTEEPTDTYANLGGQTLRPAPVGAYPAGASACGAEQMLGDVWEWTTS CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC PLRPWPGFVPMVYERYSQPFFGGDYRVLRGGSWAVEPAILRPSFRNWDHPYRRQIFAGVR CCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEECCHHCCCCCCCCCCHHHHHHHHCCE LAWDI EEECC >Mature Secondary Structure TSPEQLACHLARARARTLRLVDFDDAELCCQYDPLMSPLVWDLAHIGQQEELWLLRGGD CCHHHHHHHHHHHHHHEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCC PGQPGLLPPAVEGLYDAFEHSRASRVELPLLSPARARSYCATVRSAALDALAALPEDGDS CCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC FVFAMVISHENQHDETMLQALNLRTGSPLLAATSALPAGRPRMAGTSVLVAGGPFVLGVD EEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEC AADEPCSLDNERPAHVVDVPAFRIGRVPVTNGEWQDFIDDGGYTQSRWWSERGWQHRQRA CCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHCHHHHHHC GLTAPQFWRSGGRTRTRFGHVEDIPADEPVQHVSYFEAEAYAAWAGARLPTEVEWEKACA CCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC WDPATGSRRRYPWGTEEPTDTYANLGGQTLRPAPVGAYPAGASACGAEQMLGDVWEWTTS CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC PLRPWPGFVPMVYERYSQPFFGGDYRVLRGGSWAVEPAILRPSFRNWDHPYRRQIFAGVR CCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEECCHHCCCCCCCCCCHHHHHHHHCCE LAWDI EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12682364 [H]