| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is htpX
Identifier: 148660332
GI number: 148660332
Start: 655189
End: 656049
Strand: Direct
Name: htpX
Synonym: MRA_0570
Alternate gene names: 148660332
Gene position: 655189-656049 (Clockwise)
Preceding gene: 148660331
Following gene: 148660336
Centisome position: 14.82
GC content: 66.2
Gene sequence:
>861_bases ATGACTTGGCATCCGCATGCCAACCGGCTGAAGACGTTCCTGCTGTTGGTCGGTATGTCCGCGTTGATCGTGGCCGTCGG CGCGTTGTTTGGCAGGACGGCGCTGATGCTGGCGGCGCTGTTCGCCGTCGGAATGAACGTCTACGTCTACTTCAATAGCG ACAAGCTGGCGCTGCGGGCGATGCATGCGCAACCGGTTTCCGAACTGCAGGCGCCGGCGATGTACCGGATCGTTCGAGAG CTGGCGACCAGCGCTCACCAGCCGATGCCCCGGCTGTACATCAGCGACACCGCCGCACCCAACGCGTTCGCCACCGGCCG CAACCCGCGCAATGCCGCGGTGTGTTGCACGACTGGCATCCTGCGTATCCTCAATGAGCGTGAGCTGCGTGCCGTGCTGG GCCACGAGCTGTCTCACGTCTACAACCGCGACATCCTGATCTCTTGTGTGGCAGGTGCGCTGGCAGCGGTGATTACCGCG CTGGCCAACATGGCCATGTGGGCCGGCATGTTCGGCGGCAACCGAGACAACGCCAATCCCTTTGCACTGCTTCTGGTTGC GCTGCTGGGCCCGATCGCGGCAACCGTGATACGGATGGCCGTGTCGCGATCGCGGGAGTACCAGGCCGACGAGTCGGGTG CCGTCCTGACCGGGGACCCGCTGGCGTTGGCGTCGGCATTGCGCAAGATCTCCGGCGGCGTCCAGGCGGCGCCGCTGCCG CCGGAGCCGCAGCTGGCCAGCCAGGCGCACCTGATGATCGCCAACCCGTTCCGGGCGGGTGAGCGGATCGGATCGCTGTT TTCGACTCACCCACCGATCGAGGACCGCATTCGCCGGCTGGAGGCGATGGCGCGCGGCTGA
Upstream 100 bases:
>100_bases GTTGCCCGGCCAGGCTCGATTGCGGAACCAGCGGATACCCCTCAGGCGTTGAACCAGCAGTAATCTCCCAAGTTGAGGTG TTCTAGGAGGACACGCACTG
Downstream 100 bases:
>100_bases TAACTGTGGGTATCGAGATGCCATCGGTGATGAGTCAGGCGCCGCTATCGAGGAGGCGGTCGATCAGTTCGTGGCTGGCA TGCCGGCGTGCGGCGAGGAC
Product: heat shock protein HtpX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTWHPHANRLKTFLLLVGMSALIVAVGALFGRTALMLAALFAVGMNVYVYFNSDKLALRAMHAQPVSELQAPAMYRIVRE LATSAHQPMPRLYISDTAAPNAFATGRNPRNAAVCCTTGILRILNERELRAVLGHELSHVYNRDILISCVAGALAAVITA LANMAMWAGMFGGNRDNANPFALLLVALLGPIAATVIRMAVSRSREYQADESGAVLTGDPLALASALRKISGGVQAAPLP PEPQLASQAHLMIANPFRAGERIGSLFSTHPPIEDRIRRLEAMARG
Sequences:
>Translated_286_residues MTWHPHANRLKTFLLLVGMSALIVAVGALFGRTALMLAALFAVGMNVYVYFNSDKLALRAMHAQPVSELQAPAMYRIVRE LATSAHQPMPRLYISDTAAPNAFATGRNPRNAAVCCTTGILRILNERELRAVLGHELSHVYNRDILISCVAGALAAVITA LANMAMWAGMFGGNRDNANPFALLLVALLGPIAATVIRMAVSRSREYQADESGAVLTGDPLALASALRKISGGVQAAPLP PEPQLASQAHLMIANPFRAGERIGSLFSTHPPIEDRIRRLEAMARG >Mature_285_residues TWHPHANRLKTFLLLVGMSALIVAVGALFGRTALMLAALFAVGMNVYVYFNSDKLALRAMHAQPVSELQAPAMYRIVREL ATSAHQPMPRLYISDTAAPNAFATGRNPRNAAVCCTTGILRILNERELRAVLGHELSHVYNRDILISCVAGALAAVITAL ANMAMWAGMFGGNRDNANPFALLLVALLGPIAATVIRMAVSRSREYQADESGAVLTGDPLALASALRKISGGVQAAPLPP EPQLASQAHLMIANPFRAGERIGSLFSTHPPIEDRIRRLEAMARG
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family
Homologues:
Organism=Escherichia coli, GI1788133, Length=263, Percent_Identity=31.9391634980989, Blast_Score=101, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HTPX_MYCBO (P65816)
Other databases:
- EMBL: BX248335 - RefSeq: NP_854238.1 - ProteinModelPortal: P65816 - EnsemblBacteria: EBMYCT00000015627 - GeneID: 1091660 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb0578 - GeneTree: EBGT00050000016372 - HOGENOM: HBG739460 - OMA: RRGAEIC - ProtClustDB: PRK03072 - BioCyc: MBOV233413:MB0578-MONOMER - GO: GO:0006508 - HAMAP: MF_00188 - InterPro: IPR022919 - InterPro: IPR001915
Pfam domain/function: PF01435 Peptidase_M48
EC number: 3.4.24.-
Molecular weight: Translated: 30682; Mature: 30551
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: ACT_SITE 136-136
Signals:
None
Transmembrane regions:
HASH(0x1b443050)-; HASH(0x1c94ee88)-; HASH(0x1c94231c)-; HASH(0x1ca5b82c)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWHPHANRLKTFLLLVGMSALIVAVGALFGRTALMLAALFAVGMNVYVYFNSDKLALRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHH MHAQPVSELQAPAMYRIVRELATSAHQPMPRLYISDTAAPNAFATGRNPRNAAVCCTTGI HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH LRILNERELRAVLGHELSHVYNRDILISCVAGALAAVITALANMAMWAGMFGGNRDNANP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH FALLLVALLGPIAATVIRMAVSRSREYQADESGAVLTGDPLALASALRKISGGVQAAPLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCC PEPQLASQAHLMIANPFRAGERIGSLFSTHPPIEDRIRRLEAMARG CCCCHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCH >Mature Secondary Structure TWHPHANRLKTFLLLVGMSALIVAVGALFGRTALMLAALFAVGMNVYVYFNSDKLALRA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHH MHAQPVSELQAPAMYRIVRELATSAHQPMPRLYISDTAAPNAFATGRNPRNAAVCCTTGI HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH LRILNERELRAVLGHELSHVYNRDILISCVAGALAAVITALANMAMWAGMFGGNRDNANP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH FALLLVALLGPIAATVIRMAVSRSREYQADESGAVLTGDPLALASALRKISGGVQAAPLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCC PEPQLASQAHLMIANPFRAGERIGSLFSTHPPIEDRIRRLEAMARG CCCCHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972