Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148652677

Identifier: 148652677

GI number: 148652677

Start: 1027804

End: 1029096

Strand: Direct

Name: 148652677

Synonym: PsycPRwf_0868

Alternate gene names: NA

Gene position: 1027804-1029096 (Clockwise)

Preceding gene: 148652676

Following gene: 148652678

Centisome position: 34.5

GC content: 50.27

Gene sequence:

>1293_bases
ATGTTAAACCCTGTTCGTGCCAGCCTTCCTATTTTTGCCAAAGCAACCTTGGCGCTGATGGTAGCTGCGGTCAGCCTAAC
TGGGCTAGTAGGGTGCTCAAGCCGCTCAGACACAGATACTGCTCAAGATAAAAAAGAGCAGCCACTGATGAGCCAAGAGC
GCTTTCAGGTAGGTACCGATCTTGATATAGCCATGCTCAAGCCGCTGAGCGATGCTTATAAACAAGAGACGGGCATTAGT
ATCGAGTGGGTGCTTGTGGATCGGCAAGTATTCACCATACATTTTGATGAAGAGCCGCCGTTACACTTCGATGTGCAGCT
GCCCAAAGGGGTGGATATGCTAATGATGCACAGCGCTTATAGCTTAGCCGATGCCAATGCCAGTCATGTGCTGCAACCGG
TGGGGTCAGAGAAGCTCACCACCCGAGTGCCGGCGCAATATAAAGACCCCCAAGGCCATTGGTTTGGGGTGGCCAAATAT
GCAAGAACCTTGGTGTATAACCGCAATAAGGTGAACGAGCCTGAGCTCATTAACTACGCTGGACTTGCCGCAAAAAAATG
GTACGGCCGCTTGTGCATGACCGATATTTATAGCCCAGAAAACCAAGCCATTGCTAAAATGATGATGTCGTATCGGGGCA
CGAAGCTGACCCCAGAGATTTTGGCCAATTGGCAAACCAATATGGGCCGCCCCTCAGCCAGTAATGAGGACATCTTAAAA
AATATAGAGCAAGGCCGCTGTGATGTGGGTATTGTCGACAGCGATGTGTTCTGGCACCATGCCAAAACCCATCCCGACAC
ACCCATTCGCTTAATGTGGGCCAATCAAATTAACCGCGGCACCCTGACTAATACCATTAGTATCGGTATGATTGATGATG
GTGAAGAGGTGGGTCAGGCATTGAGATTTATGGAGTGGTTGGTCAGTGACCGCGGGCAAGCGTTATTGGCTTTTTATACC
AGTGCCTTTCCTGTGGTGGATATCAAGGATGACAGTATAAATATGCAGGCGCTGCGTCCTGAGTGGACTGAGTTTGAACC
AGACCTCACGGCGTTGCCGGACATTATTGCCAATCACAGCAAAATTGAGCCGCTTAACATGGAGCCTGAGCCGGTGCTTG
AAGATAAAGCCGGCGCTGCTGCTAGCACCAAAGACAATAGCGAGGCCGAAGCAGTGGTACAAAACGATTTAACCCAGGCT
TCTAAACAGGCTGCCTTACAGCGTACACAGGCTGCCCAATCTGAGGCAGCAGGGGGTACTACGCCGCCTATAGTGATGCA
AAATGTAGAGTAA

Upstream 100 bases:

>100_bases
AATAGATAAACAGGTAAGCTGCTAGGCCTATTACAGGTTAAGTATTTTAACCTTGTTTTAAATTTTCACCCCACTGTCCA
AAAAATCATAGGTCTTAGCC

Downstream 100 bases:

>100_bases
AGCGGCTCAATGGGATAAGGTTTTAAATGAGATTGGTTAGTTATTGATAATTGTTACTATTTGTATTAAGATGCCAAACT
GTGTTTAATTACAGGATTGT

Product: Fe3+ ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLNPVRASLPIFAKATLALMVAAVSLTGLVGCSSRSDTDTAQDKKEQPLMSQERFQVGTDLDIAMLKPLSDAYKQETGIS
IEWVLVDRQVFTIHFDEEPPLHFDVQLPKGVDMLMMHSAYSLADANASHVLQPVGSEKLTTRVPAQYKDPQGHWFGVAKY
ARTLVYNRNKVNEPELINYAGLAAKKWYGRLCMTDIYSPENQAIAKMMMSYRGTKLTPEILANWQTNMGRPSASNEDILK
NIEQGRCDVGIVDSDVFWHHAKTHPDTPIRLMWANQINRGTLTNTISIGMIDDGEEVGQALRFMEWLVSDRGQALLAFYT
SAFPVVDIKDDSINMQALRPEWTEFEPDLTALPDIIANHSKIEPLNMEPEPVLEDKAGAAASTKDNSEAEAVVQNDLTQA
SKQAALQRTQAAQSEAAGGTTPPIVMQNVE

Sequences:

>Translated_430_residues
MLNPVRASLPIFAKATLALMVAAVSLTGLVGCSSRSDTDTAQDKKEQPLMSQERFQVGTDLDIAMLKPLSDAYKQETGIS
IEWVLVDRQVFTIHFDEEPPLHFDVQLPKGVDMLMMHSAYSLADANASHVLQPVGSEKLTTRVPAQYKDPQGHWFGVAKY
ARTLVYNRNKVNEPELINYAGLAAKKWYGRLCMTDIYSPENQAIAKMMMSYRGTKLTPEILANWQTNMGRPSASNEDILK
NIEQGRCDVGIVDSDVFWHHAKTHPDTPIRLMWANQINRGTLTNTISIGMIDDGEEVGQALRFMEWLVSDRGQALLAFYT
SAFPVVDIKDDSINMQALRPEWTEFEPDLTALPDIIANHSKIEPLNMEPEPVLEDKAGAAASTKDNSEAEAVVQNDLTQA
SKQAALQRTQAAQSEAAGGTTPPIVMQNVE
>Mature_430_residues
MLNPVRASLPIFAKATLALMVAAVSLTGLVGCSSRSDTDTAQDKKEQPLMSQERFQVGTDLDIAMLKPLSDAYKQETGIS
IEWVLVDRQVFTIHFDEEPPLHFDVQLPKGVDMLMMHSAYSLADANASHVLQPVGSEKLTTRVPAQYKDPQGHWFGVAKY
ARTLVYNRNKVNEPELINYAGLAAKKWYGRLCMTDIYSPENQAIAKMMMSYRGTKLTPEILANWQTNMGRPSASNEDILK
NIEQGRCDVGIVDSDVFWHHAKTHPDTPIRLMWANQINRGTLTNTISIGMIDDGEEVGQALRFMEWLVSDRGQALLAFYT
SAFPVVDIKDDSINMQALRPEWTEFEPDLTALPDIIANHSKIEPLNMEPEPVLEDKAGAAASTKDNSEAEAVVQNDLTQA
SKQAALQRTQAAQSEAAGGTTPPIVMQNVE

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47633; Mature: 47633

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPVRASLPIFAKATLALMVAAVSLTGLVGCSSRSDTDTAQDKKEQPLMSQERFQVGTD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHCCCHHHHHHCCCCC
LDIAMLKPLSDAYKQETGISIEWVLVDRQVFTIHFDEEPPLHFDVQLPKGVDMLMMHSAY
CCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHH
SLADANASHVLQPVGSEKLTTRVPAQYKDPQGHWFGVAKYARTLVYNRNKVNEPELINYA
HHCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCEECHH
GLAAKKWYGRLCMTDIYSPENQAIAKMMMSYRGTKLTPEILANWQTNMGRPSASNEDILK
CHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHCCCCCCCCCHHHHH
NIEQGRCDVGIVDSDVFWHHAKTHPDTPIRLMWANQINRGTLTNTISIGMIDDGEEVGQA
HHHHCCCCEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCHHHHHHH
LRFMEWLVSDRGQALLAFYTSAFPVVDIKDDSINMQALRPEWTEFEPDLTALPDIIANHS
HHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHCCCC
KIEPLNMEPEPVLEDKAGAAASTKDNSEAEAVVQNDLTQASKQAALQRTQAAQSEAAGGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TPPIVMQNVE
CCCEEEECCC
>Mature Secondary Structure
MLNPVRASLPIFAKATLALMVAAVSLTGLVGCSSRSDTDTAQDKKEQPLMSQERFQVGTD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHCCCHHHHHHCCCCC
LDIAMLKPLSDAYKQETGISIEWVLVDRQVFTIHFDEEPPLHFDVQLPKGVDMLMMHSAY
CCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHH
SLADANASHVLQPVGSEKLTTRVPAQYKDPQGHWFGVAKYARTLVYNRNKVNEPELINYA
HHCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCEECHH
GLAAKKWYGRLCMTDIYSPENQAIAKMMMSYRGTKLTPEILANWQTNMGRPSASNEDILK
CHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHCCCCCCCCCHHHHH
NIEQGRCDVGIVDSDVFWHHAKTHPDTPIRLMWANQINRGTLTNTISIGMIDDGEEVGQA
HHHHCCCCEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCHHHHHHH
LRFMEWLVSDRGQALLAFYTSAFPVVDIKDDSINMQALRPEWTEFEPDLTALPDIIANHS
HHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHCCCC
KIEPLNMEPEPVLEDKAGAAASTKDNSEAEAVVQNDLTQASKQAALQRTQAAQSEAAGGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TPPIVMQNVE
CCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]