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The map label for this gene is 148652673

Identifier: 148652673

GI number: 148652673

Start: 1022250

End: 1023389

Strand: Direct

Name: 148652673

Synonym: PsycPRwf_0864

Alternate gene names: NA

Gene position: 1022250-1023389 (Clockwise)

Preceding gene: 148652672

Following gene: 148652674

Centisome position: 34.32

GC content: 48.77

Gene sequence:

>1140_bases
ATGCCCGCTACGCCGTCCTTGCAACCGCCAAAAGCTGATACAGTGAAACAGGCCACTCAACCAAAACATAAGCAGCCAGA
CTCTGACTTGCGTCATGATTATGAAGCGCTGGCCAAGCAGGCGGCGTTACGTTATGTCAGTGATGAGCAGCCTGGCTTTA
CTCGCAAACGCTGGGGCAAAGGCTTTACTTATAAAGATGCGCTGGGCAATACGGTAAAAGACCCATCACTACGCAGCCGT
TTTGATGCTTTGGCCATCCCGCCCATGTGGTCTGAGGTGTGGATTTGTGAGTATGAGGATGGGCACCTGCAATGTACAGG
CCGTGACGAGAAAGGTCGTAAGCAGTATTTATATCACGAGCAGTGGAATCAGGTACGCGATATGGCCAAGTTTGATGCGG
TAATGGGATTTGGTAACGTACTGCCTAAGCTGCGCGCACAAGTTGAGCAAGATCTTGCGGCGCCAGCGCTTAGCCGTGCT
AACGTATTGGCGGCGGTAGTAAAACTACTTGAAACCACCTTAATTCGTATCGGCAATGACCGCTATGCTAAGCAAAACAA
CAGCTATGGTCTGAGCACTTTGCGCAGCCGTCATGTCACTGAGACTGAGGAGGGGCTTGCTTTTGACTTTGTCGGAAAAA
GCTCTAAAGCGCATCATATTGAGCTACAAGATGAGCGTTTAGTTGACATTGTTCAGGCGTGTTCTGATTTACCAGGCTAT
CGTATTTTTAAATATATCGATGAAGCTGGTGAGAAGCAGGTGGTCGAGAGCGGTGATATCAATGAGTATCTGCGCACCCA
TACTGGTTATGAGTATAGCGCTAAAGACTTCCGCACTTGGATGGCGACGGTGCTGGCGGCCGCTTATCTATATGAGTATG
CCGATGATGAGGTGCTGGCAAGTGAGCCTGACAGTAAGCTGCGTCAGCAATTGGTGGTTGATATGGTTAAAGAGGTGGCG
CGTAATTTGGGCAATACGCCAAGTGTCTCGCGCGCCTCTTATATTCATCCCAAAATTATTGAGCGCTTTTTACAAGACAG
CTTTATGGACGCTTATAAGCAGGGGCGGCGTGGCCGTAGCAAAAAATATCAATCGCTTGATGAAAAAGCAGTGTTGGCAT
TGTTAACCACAAACGAGTAA

Upstream 100 bases:

>100_bases
GCTACTGTTTTAAGCGGCTTGTGCTATTTAAAATGGTAGTCGCTTTTTATAACTTATAACTTATAGCTTTATAATCTGAA
TAATCTGACAGGAGTTGTAT

Downstream 100 bases:

>100_bases
TCTATCTCACTTTAATCTTGAATAGTACTTCTTCTTTTAACGGCATTAATTTTTTAGACACTCGACCATGACTCGCTTTA
TTTTTGTCCCTGCGACATCG

Product: topoisomerase IB-like protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerasei; -Like DNA poisomerase I; DNA poisomerase ; Type I DNA poisomerase; Eukaryotic-Like DNA poisomerase I

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MPATPSLQPPKADTVKQATQPKHKQPDSDLRHDYEALAKQAALRYVSDEQPGFTRKRWGKGFTYKDALGNTVKDPSLRSR
FDALAIPPMWSEVWICEYEDGHLQCTGRDEKGRKQYLYHEQWNQVRDMAKFDAVMGFGNVLPKLRAQVEQDLAAPALSRA
NVLAAVVKLLETTLIRIGNDRYAKQNNSYGLSTLRSRHVTETEEGLAFDFVGKSSKAHHIELQDERLVDIVQACSDLPGY
RIFKYIDEAGEKQVVESGDINEYLRTHTGYEYSAKDFRTWMATVLAAAYLYEYADDEVLASEPDSKLRQQLVVDMVKEVA
RNLGNTPSVSRASYIHPKIIERFLQDSFMDAYKQGRRGRSKKYQSLDEKAVLALLTTNE

Sequences:

>Translated_379_residues
MPATPSLQPPKADTVKQATQPKHKQPDSDLRHDYEALAKQAALRYVSDEQPGFTRKRWGKGFTYKDALGNTVKDPSLRSR
FDALAIPPMWSEVWICEYEDGHLQCTGRDEKGRKQYLYHEQWNQVRDMAKFDAVMGFGNVLPKLRAQVEQDLAAPALSRA
NVLAAVVKLLETTLIRIGNDRYAKQNNSYGLSTLRSRHVTETEEGLAFDFVGKSSKAHHIELQDERLVDIVQACSDLPGY
RIFKYIDEAGEKQVVESGDINEYLRTHTGYEYSAKDFRTWMATVLAAAYLYEYADDEVLASEPDSKLRQQLVVDMVKEVA
RNLGNTPSVSRASYIHPKIIERFLQDSFMDAYKQGRRGRSKKYQSLDEKAVLALLTTNE
>Mature_378_residues
PATPSLQPPKADTVKQATQPKHKQPDSDLRHDYEALAKQAALRYVSDEQPGFTRKRWGKGFTYKDALGNTVKDPSLRSRF
DALAIPPMWSEVWICEYEDGHLQCTGRDEKGRKQYLYHEQWNQVRDMAKFDAVMGFGNVLPKLRAQVEQDLAAPALSRAN
VLAAVVKLLETTLIRIGNDRYAKQNNSYGLSTLRSRHVTETEEGLAFDFVGKSSKAHHIELQDERLVDIVQACSDLPGYR
IFKYIDEAGEKQVVESGDINEYLRTHTGYEYSAKDFRTWMATVLAAAYLYEYADDEVLASEPDSKLRQQLVVDMVKEVAR
NLGNTPSVSRASYIHPKIIERFLQDSFMDAYKQGRRGRSKKYQSLDEKAVLALLTTNE

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43152; Mature: 43021

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATPSLQPPKADTVKQATQPKHKQPDSDLRHDYEALAKQAALRYVSDEQPGFTRKRWGK
CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
GFTYKDALGNTVKDPSLRSRFDALAIPPMWSEVWICEYEDGHLQCTGRDEKGRKQYLYHE
CCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHH
QWNQVRDMAKFDAVMGFGNVLPKLRAQVEQDLAAPALSRANVLAAVVKLLETTLIRIGND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RYAKQNNSYGLSTLRSRHVTETEEGLAFDFVGKSSKAHHIELQDERLVDIVQACSDLPGY
HHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCH
RIFKYIDEAGEKQVVESGDINEYLRTHTGYEYSAKDFRTWMATVLAAAYLYEYADDEVLA
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
SEPDSKLRQQLVVDMVKEVARNLGNTPSVSRASYIHPKIIERFLQDSFMDAYKQGRRGRS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
KKYQSLDEKAVLALLTTNE
HHHHHHHHHHEEEEEECCC
>Mature Secondary Structure 
PATPSLQPPKADTVKQATQPKHKQPDSDLRHDYEALAKQAALRYVSDEQPGFTRKRWGK
CCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
GFTYKDALGNTVKDPSLRSRFDALAIPPMWSEVWICEYEDGHLQCTGRDEKGRKQYLYHE
CCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHH
QWNQVRDMAKFDAVMGFGNVLPKLRAQVEQDLAAPALSRANVLAAVVKLLETTLIRIGND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RYAKQNNSYGLSTLRSRHVTETEEGLAFDFVGKSSKAHHIELQDERLVDIVQACSDLPGY
HHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCH
RIFKYIDEAGEKQVVESGDINEYLRTHTGYEYSAKDFRTWMATVLAAAYLYEYADDEVLA
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
SEPDSKLRQQLVVDMVKEVARNLGNTPSVSRASYIHPKIIERFLQDSFMDAYKQGRRGRS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
KKYQSLDEKAVLALLTTNE
HHHHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA