Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
---|---|
Accession | NC_009524 |
Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is cls [H]
Identifier: 148652674
GI number: 148652674
Start: 1023457
End: 1025226
Strand: Direct
Name: cls [H]
Synonym: PsycPRwf_0865
Alternate gene names: 148652674
Gene position: 1023457-1025226 (Clockwise)
Preceding gene: 148652673
Following gene: 148652675
Centisome position: 34.36
GC content: 45.99
Gene sequence:
>1770_bases ATGACTCGCTTTATTTTTGTCCCTGCGACATCGACTTCCACGTATCCGGCTTTAAGCGAAGAGCTTGAGGCGGCATCTGT GTGGCTACAGACCGTGTCGGCGGGCGACTGGGCTTGGCTTGGGGTCGCTATTCATATCACCCTAACGGTGTTTATGATCG TGCGTATCTTATCTACTCAGCGCAATAATGGGATTGCCATTGCGTGGTTGGTATTGTTATTTGCCATCCCTTTTTTGAGT ATTATTGCTTATGTCTTGGTGGGTGAACCCTATTTGGGCAAAAGCTATAAATCACGTAACTCACAAGCCCAAAAAATGCT AAAGGCTGTCGCCAAACGTGAAGCGATTCAGTTGGCCAAAGTCGATGATACCTTGCCGCAGCGCTATCAAGGAGTCAGTC GTATTGGTACTTTTGATACTGGATTTGGGGTGTATGATAAGCACAAGATGCAGCTACTGACCTCAGCACAGGCCACATTT GAGTCGCTAATTTCTGATATTAACCATGCCACCACCTTAATTTTGATGGAGTTTTATATCATCTATCCCAAAGGCCGGGT CCAAGAGGTCTTTGAGGCTTTAATTGCCGCAGCACACAGAGGCGTGGAGTGTCAGATATTAGCAGATAGTGTGGGCAGCT TTAGCTTCTTTACCGATGACTGGCATAAGCGGCTAACGCAAGCAGGTGTGACCATCCATCAGTCGCTGCCAGTGGGGTTA TTTAAGACCTTATTTAAACGTACGGATCTACGCAATCACCGCAAGATTGTGGTTATAGATGATGATATTGGCTATACCGG TAGCTTCAACTTGGTTGATCCTGAGTTTTTTAAACAAGACAAGGCGGTAGGTCAGTGGATTGACTTAATTATGCGCATTG AAAGTGAGAAATCGGTAAGTGTGGTGACCGCTTTGGCCGCAGTGAATGTGACTGATATTGGTGCTGAGAGCCTAACTAAT TTAAAAGAGCTTGGCTTGCGCATTGATAACAATATTAATATTTATACACGCAAACTGTATCGTCCCAAGCCGGCCATTAA TGATATAAATGATAAGGCATCGGGTTATCTATCGCGGCAAATCGCCTCTTTTAACTTAAGTGATGAATATGGTCATGACT TTAAGGCCTCTGATCAAAAAGTACAGGAGGGGGCAGACGAGAGGTTGCCGCAGAAGCTGGCAGGCTATATGCAGCAAATT GCCAACTTGCCAGCAATAGATAATGTCATGGCGCAGCTCATTCCTTCAGCGCCGCGCATTACAGAGCATGTGATTTATAA CACCTTATTGACTGTGTTTCACCGCGCAGATCGACGCATTCAAATTACCACCCCCTATTTTGTCCCTGATGAGGCGCTGT TAGCGGCGTTAACTACCGCGGCAAAACGAGGCGTGGAGGTGACCTTAATTTTACCCAAAAAGGTCGACTCGTTTTTTGTG CAGCATGCCTCACAAGCGTCGTACTCTATTTTGATGGAGGCTGGGGTTAATATTGCCTTATTTAATGGCGGTTTGTTGCA TGCAAAGACGGTGGTGATTGATGATGACTACTGCTTATTTGGCACCGTCAATATGGACATGCGCAGCTTTTATCTGAATA TGGAGATTAGCTTAGCGCTTTATACCCCAAGTATTGTGGCACAAGTGGTGCGCTGCCAGCAGGCGTATTTGACCCAGTGT GAGATGCTGGATCTGGCACACTGGGAGAGTCGGCCGACTTATAAGCGTTTATTTGATTCGGGCATACGTTTGTTTAGCCC GTTATTGTAG
Upstream 100 bases:
>100_bases GCAGTGTTGGCATTGTTAACCACAAACGAGTAATCTATCTCACTTTAATCTTGAATAGTACTTCTTCTTTTAACGGCATT AATTTTTTAGACACTCGACC
Downstream 100 bases:
>100_bases ATATATTATTGATAGCAATCGCTATTTTAAACATTTTAAATGGGGTAAAATAACGCCTATTTTTTCCGCCATTGGTTTTA TTTCTTTTTATAAGGTGATA
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MTRFIFVPATSTSTYPALSEELEAASVWLQTVSAGDWAWLGVAIHITLTVFMIVRILSTQRNNGIAIAWLVLLFAIPFLS IIAYVLVGEPYLGKSYKSRNSQAQKMLKAVAKREAIQLAKVDDTLPQRYQGVSRIGTFDTGFGVYDKHKMQLLTSAQATF ESLISDINHATTLILMEFYIIYPKGRVQEVFEALIAAAHRGVECQILADSVGSFSFFTDDWHKRLTQAGVTIHQSLPVGL FKTLFKRTDLRNHRKIVVIDDDIGYTGSFNLVDPEFFKQDKAVGQWIDLIMRIESEKSVSVVTALAAVNVTDIGAESLTN LKELGLRIDNNINIYTRKLYRPKPAINDINDKASGYLSRQIASFNLSDEYGHDFKASDQKVQEGADERLPQKLAGYMQQI ANLPAIDNVMAQLIPSAPRITEHVIYNTLLTVFHRADRRIQITTPYFVPDEALLAALTTAAKRGVEVTLILPKKVDSFFV QHASQASYSILMEAGVNIALFNGGLLHAKTVVIDDDYCLFGTVNMDMRSFYLNMEISLALYTPSIVAQVVRCQQAYLTQC EMLDLAHWESRPTYKRLFDSGIRLFSPLL
Sequences:
>Translated_589_residues MTRFIFVPATSTSTYPALSEELEAASVWLQTVSAGDWAWLGVAIHITLTVFMIVRILSTQRNNGIAIAWLVLLFAIPFLS IIAYVLVGEPYLGKSYKSRNSQAQKMLKAVAKREAIQLAKVDDTLPQRYQGVSRIGTFDTGFGVYDKHKMQLLTSAQATF ESLISDINHATTLILMEFYIIYPKGRVQEVFEALIAAAHRGVECQILADSVGSFSFFTDDWHKRLTQAGVTIHQSLPVGL FKTLFKRTDLRNHRKIVVIDDDIGYTGSFNLVDPEFFKQDKAVGQWIDLIMRIESEKSVSVVTALAAVNVTDIGAESLTN LKELGLRIDNNINIYTRKLYRPKPAINDINDKASGYLSRQIASFNLSDEYGHDFKASDQKVQEGADERLPQKLAGYMQQI ANLPAIDNVMAQLIPSAPRITEHVIYNTLLTVFHRADRRIQITTPYFVPDEALLAALTTAAKRGVEVTLILPKKVDSFFV QHASQASYSILMEAGVNIALFNGGLLHAKTVVIDDDYCLFGTVNMDMRSFYLNMEISLALYTPSIVAQVVRCQQAYLTQC EMLDLAHWESRPTYKRLFDSGIRLFSPLL >Mature_588_residues TRFIFVPATSTSTYPALSEELEAASVWLQTVSAGDWAWLGVAIHITLTVFMIVRILSTQRNNGIAIAWLVLLFAIPFLSI IAYVLVGEPYLGKSYKSRNSQAQKMLKAVAKREAIQLAKVDDTLPQRYQGVSRIGTFDTGFGVYDKHKMQLLTSAQATFE SLISDINHATTLILMEFYIIYPKGRVQEVFEALIAAAHRGVECQILADSVGSFSFFTDDWHKRLTQAGVTIHQSLPVGLF KTLFKRTDLRNHRKIVVIDDDIGYTGSFNLVDPEFFKQDKAVGQWIDLIMRIESEKSVSVVTALAAVNVTDIGAESLTNL KELGLRIDNNINIYTRKLYRPKPAINDINDKASGYLSRQIASFNLSDEYGHDFKASDQKVQEGADERLPQKLAGYMQQIA NLPAIDNVMAQLIPSAPRITEHVIYNTLLTVFHRADRRIQITTPYFVPDEALLAALTTAAKRGVEVTLILPKKVDSFFVQ HASQASYSILMEAGVNIALFNGGLLHAKTVVIDDDYCLFGTVNMDMRSFYLNMEISLALYTPSIVAQVVRCQQAYLTQCE MLDLAHWESRPTYKRLFDSGIRLFSPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=566, Percent_Identity=33.5689045936396, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI1787007, Length=112, Percent_Identity=31.25, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 66006; Mature: 65875
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFIFVPATSTSTYPALSEELEAASVWLQTVSAGDWAWLGVAIHITLTVFMIVRILSTQ CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC RNNGIAIAWLVLLFAIPFLSIIAYVLVGEPYLGKSYKSRNSQAQKMLKAVAKREAIQLAK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH VDDTLPQRYQGVSRIGTFDTGFGVYDKHKMQLLTSAQATFESLISDINHATTLILMEFYI HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYPKGRVQEVFEALIAAAHRGVECQILADSVGSFSFFTDDWHKRLTQAGVTIHQSLPVGL CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEEECCCCHHH FKTLFKRTDLRNHRKIVVIDDDIGYTGSFNLVDPEFFKQDKAVGQWIDLIMRIESEKSVS HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH VVTALAAVNVTDIGAESLTNLKELGLRIDNNINIYTRKLYRPKPAINDINDKASGYLSRQ HHHHHHHHCHHHCCHHHHHHHHHCCCEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH IASFNLSDEYGHDFKASDQKVQEGADERLPQKLAGYMQQIANLPAIDNVMAQLIPSAPRI HHCCCCCHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH TEHVIYNTLLTVFHRADRRIQITTPYFVPDEALLAALTTAAKRGVEVTLILPKKVDSFFV HHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH QHASQASYSILMEAGVNIALFNGGLLHAKTVVIDDDYCLFGTVNMDMRSFYLNMEISLAL HHHCCHHHHHHHHCCCEEEEECCCEEEEEEEEEECCEEEEEEECCCCEEEEEEEEEEEEE YTPSIVAQVVRCQQAYLTQCEMLDLAHWESRPTYKRLFDSGIRLFSPLL ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRFIFVPATSTSTYPALSEELEAASVWLQTVSAGDWAWLGVAIHITLTVFMIVRILSTQ CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC RNNGIAIAWLVLLFAIPFLSIIAYVLVGEPYLGKSYKSRNSQAQKMLKAVAKREAIQLAK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH VDDTLPQRYQGVSRIGTFDTGFGVYDKHKMQLLTSAQATFESLISDINHATTLILMEFYI HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYPKGRVQEVFEALIAAAHRGVECQILADSVGSFSFFTDDWHKRLTQAGVTIHQSLPVGL CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEEECCCCHHH FKTLFKRTDLRNHRKIVVIDDDIGYTGSFNLVDPEFFKQDKAVGQWIDLIMRIESEKSVS HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH VVTALAAVNVTDIGAESLTNLKELGLRIDNNINIYTRKLYRPKPAINDINDKASGYLSRQ HHHHHHHHCHHHCCHHHHHHHHHCCCEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH IASFNLSDEYGHDFKASDQKVQEGADERLPQKLAGYMQQIANLPAIDNVMAQLIPSAPRI HHCCCCCHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH TEHVIYNTLLTVFHRADRRIQITTPYFVPDEALLAALTTAAKRGVEVTLILPKKVDSFFV HHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH QHASQASYSILMEAGVNIALFNGGLLHAKTVVIDDDYCLFGTVNMDMRSFYLNMEISLAL HHHCCHHHHHHHHCCCEEEEECCCEEEEEEEEEECCEEEEEEECCCCEEEEEEEEEEEEE YTPSIVAQVVRCQQAYLTQCEMLDLAHWESRPTYKRLFDSGIRLFSPLL ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA