Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652070
Identifier: 148652070
GI number: 148652070
Start: 303521
End: 304216
Strand: Direct
Name: 148652070
Synonym: PsycPRwf_0258
Alternate gene names: NA
Gene position: 303521-304216 (Clockwise)
Preceding gene: 148652043
Following gene: 148652071
Centisome position: 10.19
GC content: 48.13
Gene sequence:
>696_bases ATGTTGCCCAAAAATAGGCTATCAAAAATAGCAGTCTTAAAAGTAGCGCCCTTAAAAATAGCGTCAAAAGCCATCATCCC ATTAAAAACCTTAGCGCATCGCTCAGTGAGCAGCTTGCGTTTAAGTCAGCTAAAGTCTGTGGCAAGTCAACTAACGCCTA TGGCTGAGCAAAAAAGTCGGCCGTTAAATGCTGATGAGATTGCCATGGCGCACTCGGTATTCGGTGCTGACTTTGATGTC TCACAAGTGCGATTAAAAACTGCGTGGTGGGTGCTAAAAACCTATGCGGTAAGCCCCAATGGCAATATTTATTTTAATCC AAAAGACTGGATCGAGGACTTTAGCAAGCAGTCTTTGGGTAAAAAAAGCTGGCTGATTCATGAGCTCACCCACGTGTGGC AACTGCAGCAAGGCCTTAAGGTGGTGCGCGGGGCCATGATGAACCGCCGATATGATTACAGACTTGCTGAGGGCAGACCG TTTTTTAGCTATGGTATTGAGCAGCAAGCACGCATGGTGCAGGACTATTTTGTGCGCCGAGAGCAGGGCAAAGATTGCAG CGCCTGGCAGGCGTGTATCCCATTTTTGCAAAACCAAGCGCTTGGCAATAGTATGGTGTTGCAAGCGCAGCGCCAGCATC AGACTCAGGCCGATGCTCAAGTAGACAAGCTAAGCACCCAGGAGACCAATACATGA
Upstream 100 bases:
>100_bases TCACTTGTAGTTATGGCCGTTTGCACTCATTATTAAGGTGTGGTCCTCTTTTTTATATCCATCACCTTAATCTATACCTT AATTTATAAAGAATCCGTCT
Downstream 100 bases:
>100_bases GCTTCATCACATCCGATGTTGTCAAGCCGTCCAATAACAAATCACTGCTTATAAAGAAATCTTTTATGGCATTGGCGCTG CTTTCAAGCTTGGGAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Rhs Element Vgr Related Protein
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLPKNRLSKIAVLKVAPLKIASKAIIPLKTLAHRSVSSLRLSQLKSVASQLTPMAEQKSRPLNADEIAMAHSVFGADFDV SQVRLKTAWWVLKTYAVSPNGNIYFNPKDWIEDFSKQSLGKKSWLIHELTHVWQLQQGLKVVRGAMMNRRYDYRLAEGRP FFSYGIEQQARMVQDYFVRREQGKDCSAWQACIPFLQNQALGNSMVLQAQRQHQTQADAQVDKLSTQETNT
Sequences:
>Translated_231_residues MLPKNRLSKIAVLKVAPLKIASKAIIPLKTLAHRSVSSLRLSQLKSVASQLTPMAEQKSRPLNADEIAMAHSVFGADFDV SQVRLKTAWWVLKTYAVSPNGNIYFNPKDWIEDFSKQSLGKKSWLIHELTHVWQLQQGLKVVRGAMMNRRYDYRLAEGRP FFSYGIEQQARMVQDYFVRREQGKDCSAWQACIPFLQNQALGNSMVLQAQRQHQTQADAQVDKLSTQETNT >Mature_231_residues MLPKNRLSKIAVLKVAPLKIASKAIIPLKTLAHRSVSSLRLSQLKSVASQLTPMAEQKSRPLNADEIAMAHSVFGADFDV SQVRLKTAWWVLKTYAVSPNGNIYFNPKDWIEDFSKQSLGKKSWLIHELTHVWQLQQGLKVVRGAMMNRRYDYRLAEGRP FFSYGIEQQARMVQDYFVRREQGKDCSAWQACIPFLQNQALGNSMVLQAQRQHQTQADAQVDKLSTQETNT
Specific function: Unknown
COG id: COG4253
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26334; Mature: 26334
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKNRLSKIAVLKVAPLKIASKAIIPLKTLAHRSVSSLRLSQLKSVASQLTPMAEQKSR CCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC PLNADEIAMAHSVFGADFDVSQVRLKTAWWVLKTYAVSPNGNIYFNPKDWIEDFSKQSLG CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHHCC KKSWLIHELTHVWQLQQGLKVVRGAMMNRRYDYRLAEGRPFFSYGIEQQARMVQDYFVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH EQGKDCSAWQACIPFLQNQALGNSMVLQAQRQHQTQADAQVDKLSTQETNT HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLPKNRLSKIAVLKVAPLKIASKAIIPLKTLAHRSVSSLRLSQLKSVASQLTPMAEQKSR CCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC PLNADEIAMAHSVFGADFDVSQVRLKTAWWVLKTYAVSPNGNIYFNPKDWIEDFSKQSLG CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHHCC KKSWLIHELTHVWQLQQGLKVVRGAMMNRRYDYRLAEGRPFFSYGIEQQARMVQDYFVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH EQGKDCSAWQACIPFLQNQALGNSMVLQAQRQHQTQADAQVDKLSTQETNT HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA