Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
---|---|
Accession | NC_009524 |
Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is 148652071
Identifier: 148652071
GI number: 148652071
Start: 304213
End: 305208
Strand: Direct
Name: 148652071
Synonym: PsycPRwf_0259
Alternate gene names: NA
Gene position: 304213-305208 (Clockwise)
Preceding gene: 148652070
Following gene: 148652073
Centisome position: 10.21
GC content: 51.91
Gene sequence:
>996_bases ATGAGCTTCATCACATCCGATGTTGTCAAGCCGTCCAATAACAAATCACTGCTTATAAAGAAATCTTTTATGGCATTGGC GCTGCTTTCAAGCTTGGGAGTGGCCGCTTGCCAGCCTAGCACTGAGCAGTCGGCAGCCAATAAAACGCCCGACAATAGCA CCCAAAGCAGTCAGGCGGCGCAAACCTCAGATACCCAGACACCCACGCCAATGAGTGCAGAAGCTACTGCCCAGGTGAAA CACTTCGAGGCAGAATTCGTGAATAAAATGCTGGATCTACAGCAAAGCCAGCAGGCTGAATATGAAGCGCTGCAAGCGGC AGATGCTGCAGAGCAGGAGGTGGCTACCAAACAAGCCGATGCGGCCACTTCTGAAACTGGCTCCAACGCTGAACCCCAGA CTGTCTCCAAGACTGGCCCTGAAGCTGGAACTGGCACTGGTTCTGAAGCTGGCTCTGGTTCTGAAGCGACCACCAAAACC ACTGACCCTGACATAACAGGCATAACGGGCAGCGGTGAGGCACAGGCGGCGACCCAGCAAGAGGCAAAGCCGTCTCAAGA GCTGCCCGGCTTACCGCTTGTAGATTTGGCCATTAAGCCGCCTGAGCAGCTAACGCCCACCGAGATTAGCAGCCGTTATA ACGTGGGCATGCAGTCGTTGTATCTGGAGGAGGGCATACCGCTACCAGCTCAGGCCATTGATACTTTGCTTAATATCGCC ACGTTAACCCCAGGCGTGTTTCATAATACTGAGCTTGCTGAGCATTTGGTGGCAAAAAGTCCGGCCTTGGCTAGAATGCT CAAACAGTATCAAGTATGGGATCAGATTGAGCGTCAGCAAAGCGCCGAGCTTGAAGCGCTCAAACAGTCGCAGATTGAGG CTCAGCAGAAGCAGCAGGCCGAGTTTGATGCGTTGGCCAAAGAGTTCAATGATAAAATTGCCGCGTATGATGAGCAAATC AAAAACTATGAACAAAAGCTGAAGACGTTTAACTAG
Upstream 100 bases:
>100_bases ACCAAGCGCTTGGCAATAGTATGGTGTTGCAAGCGCAGCGCCAGCATCAGACTCAGGCCGATGCTCAAGTAGACAAGCTA AGCACCCAGGAGACCAATAC
Downstream 100 bases:
>100_bases GCGAGTGCGTGTGGTGGGCAGGTGTTTATGGCCTGGCCATTTAAAAGCAGATATTCAAAAGCAGCCATTTAAAAGCAGTT ATTCGAAAATGGCCATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAAQTSDTQTPTPMSAEATAQVK HFEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQADAATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKT TDPDITGITGSGEAQAATQQEAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIA TLTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQAEFDALAKEFNDKIAAYDEQI KNYEQKLKTFN
Sequences:
>Translated_331_residues MSFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAAQTSDTQTPTPMSAEATAQVK HFEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQADAATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKT TDPDITGITGSGEAQAATQQEAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIA TLTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQAEFDALAKEFNDKIAAYDEQI KNYEQKLKTFN >Mature_330_residues SFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAAQTSDTQTPTPMSAEATAQVKH FEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQADAATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKTT DPDITGITGSGEAQAATQQEAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIAT LTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQAEFDALAKEFNDKIAAYDEQIK NYEQKLKTFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35422; Mature: 35291
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAA CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCCCCHHHHHH QTSDTQTPTPMSAEATAQVKHFEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQAD HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKTTDPDITGITGSGEAQAATQQ HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH EAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIA HCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH TLTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQA HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFDALAKEFNDKIAAYDEQIKNYEQKLKTFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAA CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCCCCHHHHHH QTSDTQTPTPMSAEATAQVKHFEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQAD HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKTTDPDITGITGSGEAQAATQQ HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH EAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIA HCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH TLTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQA HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFDALAKEFNDKIAAYDEQIKNYEQKLKTFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA