Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148652071

Identifier: 148652071

GI number: 148652071

Start: 304213

End: 305208

Strand: Direct

Name: 148652071

Synonym: PsycPRwf_0259

Alternate gene names: NA

Gene position: 304213-305208 (Clockwise)

Preceding gene: 148652070

Following gene: 148652073

Centisome position: 10.21

GC content: 51.91

Gene sequence:

>996_bases
ATGAGCTTCATCACATCCGATGTTGTCAAGCCGTCCAATAACAAATCACTGCTTATAAAGAAATCTTTTATGGCATTGGC
GCTGCTTTCAAGCTTGGGAGTGGCCGCTTGCCAGCCTAGCACTGAGCAGTCGGCAGCCAATAAAACGCCCGACAATAGCA
CCCAAAGCAGTCAGGCGGCGCAAACCTCAGATACCCAGACACCCACGCCAATGAGTGCAGAAGCTACTGCCCAGGTGAAA
CACTTCGAGGCAGAATTCGTGAATAAAATGCTGGATCTACAGCAAAGCCAGCAGGCTGAATATGAAGCGCTGCAAGCGGC
AGATGCTGCAGAGCAGGAGGTGGCTACCAAACAAGCCGATGCGGCCACTTCTGAAACTGGCTCCAACGCTGAACCCCAGA
CTGTCTCCAAGACTGGCCCTGAAGCTGGAACTGGCACTGGTTCTGAAGCTGGCTCTGGTTCTGAAGCGACCACCAAAACC
ACTGACCCTGACATAACAGGCATAACGGGCAGCGGTGAGGCACAGGCGGCGACCCAGCAAGAGGCAAAGCCGTCTCAAGA
GCTGCCCGGCTTACCGCTTGTAGATTTGGCCATTAAGCCGCCTGAGCAGCTAACGCCCACCGAGATTAGCAGCCGTTATA
ACGTGGGCATGCAGTCGTTGTATCTGGAGGAGGGCATACCGCTACCAGCTCAGGCCATTGATACTTTGCTTAATATCGCC
ACGTTAACCCCAGGCGTGTTTCATAATACTGAGCTTGCTGAGCATTTGGTGGCAAAAAGTCCGGCCTTGGCTAGAATGCT
CAAACAGTATCAAGTATGGGATCAGATTGAGCGTCAGCAAAGCGCCGAGCTTGAAGCGCTCAAACAGTCGCAGATTGAGG
CTCAGCAGAAGCAGCAGGCCGAGTTTGATGCGTTGGCCAAAGAGTTCAATGATAAAATTGCCGCGTATGATGAGCAAATC
AAAAACTATGAACAAAAGCTGAAGACGTTTAACTAG

Upstream 100 bases:

>100_bases
ACCAAGCGCTTGGCAATAGTATGGTGTTGCAAGCGCAGCGCCAGCATCAGACTCAGGCCGATGCTCAAGTAGACAAGCTA
AGCACCCAGGAGACCAATAC

Downstream 100 bases:

>100_bases
GCGAGTGCGTGTGGTGGGCAGGTGTTTATGGCCTGGCCATTTAAAAGCAGATATTCAAAAGCAGCCATTTAAAAGCAGTT
ATTCGAAAATGGCCATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAAQTSDTQTPTPMSAEATAQVK
HFEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQADAATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKT
TDPDITGITGSGEAQAATQQEAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIA
TLTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQAEFDALAKEFNDKIAAYDEQI
KNYEQKLKTFN

Sequences:

>Translated_331_residues
MSFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAAQTSDTQTPTPMSAEATAQVK
HFEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQADAATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKT
TDPDITGITGSGEAQAATQQEAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIA
TLTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQAEFDALAKEFNDKIAAYDEQI
KNYEQKLKTFN
>Mature_330_residues
SFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAAQTSDTQTPTPMSAEATAQVKH
FEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQADAATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKTT
DPDITGITGSGEAQAATQQEAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIAT
LTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQAEFDALAKEFNDKIAAYDEQIK
NYEQKLKTFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35422; Mature: 35291

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAA
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCCCCHHHHHH
QTSDTQTPTPMSAEATAQVKHFEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQAD
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKTTDPDITGITGSGEAQAATQQ
HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
EAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIA
HCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH
TLTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQA
HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFDALAKEFNDKIAAYDEQIKNYEQKLKTFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFITSDVVKPSNNKSLLIKKSFMALALLSSLGVAACQPSTEQSAANKTPDNSTQSSQAA
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCCCCHHHHHH
QTSDTQTPTPMSAEATAQVKHFEAEFVNKMLDLQQSQQAEYEALQAADAAEQEVATKQAD
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATSETGSNAEPQTVSKTGPEAGTGTGSEAGSGSEATTKTTDPDITGITGSGEAQAATQQ
HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
EAKPSQELPGLPLVDLAIKPPEQLTPTEISSRYNVGMQSLYLEEGIPLPAQAIDTLLNIA
HCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH
TLTPGVFHNTELAEHLVAKSPALARMLKQYQVWDQIERQQSAELEALKQSQIEAQQKQQA
HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFDALAKEFNDKIAAYDEQIKNYEQKLKTFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA