Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
---|---|
Accession | NC_009524 |
Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is murE [H]
Identifier: 148651952
GI number: 148651952
Start: 162117
End: 163826
Strand: Direct
Name: murE [H]
Synonym: PsycPRwf_0135
Alternate gene names: 148651952
Gene position: 162117-163826 (Clockwise)
Preceding gene: 148651951
Following gene: 148651953
Centisome position: 5.44
GC content: 50.35
Gene sequence:
>1710_bases ATGACACATACCCAACCTGCTCCTCACTTACGCTCTATAGTTAACGCCGCCGTCAAGATATTACCGCAGCATCAGTCCAC CTTGCAGCTACTTAGAGTACCGGCAGTGCTTGATGTGCCTTTCTCAAAGTTTGTGCTCGATAGCCGTCAGTTGGCAAAGC GTGACGCGTCATCCGCGCCGGCAGCCTTTGTGTTATTAAAAAGTCAGACTCAGCCTTTGCAAAAAAGCCAGCAGTATGTC CAAACCGCCTTACCGCAAGCGGCATTTATCATTAGTGAGATTGACCCACAGCAGTTAGGCTTAGAGGGATTAGATAAACC AAGCGACTCAAGTCCAGACTGTCCTATTTTATTTGTGCCCGATATCCGTGATGTACTGGGTACTTTGATTCAGTTGAGTC TTTTGTCTGATGATGCGCTCTCACAGATCGGTGATGCACAGTCTTTGGCACAAACACTGCCGCAAGTTATCGCTGTAACC GGCACCAATGGCAAAACCACCATTAGTCAGTTAATGGCTCAGTTGTGTCAGTTTTCAGAGGTCGCTCAATTACAAAACAG TGCAGTGATGGGTACCGCGGGTAACGGTCGTCTAGACAGTCTCGTACAGGCCAGCCATACCACAGGCGATGCGCTAGCGG TACAAGGCTTCTTACGTAAGATGGGTGATGAAGGGGTGGATTTATTAGCCCTAGAGGCCAGCTCACATGGTCTCGATCAG CAGCGCTTGCAAGGCGTACCAGTCACGGTGGCACTGTATACCAACTTAAGCCGTGACCATTTAGACTATCACCCAGATAT GCAAGATTATGCCCAAGCCAAGGCACGCTTATTTGATAAAGCTTATTTTCCACAGTTAACACATGCTGTGATTAATGCAG ATGATGAGTTTGCGCCGCTGATGATTGAGACAGCGCAAAACTCAGGGGTTAGTGTCTGGTTGTACAGCTTACAGGGCGAT TTTATCGAAAAAAGCGATCTGCAACGTAATGCCTACTTTATCGCCAAAACCATTGAGCCAAGCTTAGATGGGGTGAAAAT TGAGGCCGCAACCAGCTTTGGGCCATTGACGTTGCACAGCCCCTTATTAGGCCGCTTTAACGTGGCCAACCTATTGGCAG CTGTCGCCGGAGCGATCGCGTTAGGTATCGAGCCTGAGAGCATCCCCGCCTTAGTCAAACAGCTGCATGGTGCCAGTGGC CGTATGCAGCGTGTGAGCTTAGATGAGCAAGGCTCACAGCCTGAGCAAGGGGTGTTTATTGTCGATTATGCGCACACGCC GGATGCGTTAACCCAAGTGCTGACCAGTTTAAAATCGCATTGCAGCGGTAACTTATGGGCCATCTTTGGCTGCGGCGGTG ACCGTGATAAGGGTAAGCGCCCTCTCATGGCGCAGGCGGGCTTGGCCACTGCCGATAAAGTGGTATTAACCTCTGACAAT CCGCGCAGTGAAGATCCGCAAATGATCTTGCAGGACATGCAGCAAGGGATGAGTGACGAGCAGCATGCCAAAACCACAGT CATTGCCGATCGAAAACAGGCCATCGAGTATGCCGTAGAGCACGCTGCCGCAGATGATATCGTGGTCATTGCTGGTAAAG GGCATGAGACTTATCAAGAAATCAAAGGCGTGCGTTATGACTTCGATGACCGCTTAGTGCTACAGCAGGCATTAATTGCG GCGCACAGTTCAGAGGCCTCAAGCCGCTAA
Upstream 100 bases:
>100_bases TTTTAGGTGGCCAACTGTGGTAGTTGGCCGCTTAACTGGTCAATAGGCTACCGTTAGCGCTTTGGTCAATAAACACAAGT AAATTATAAGGCCCTCTAGG
Downstream 100 bases:
>100_bases CCTTATCACCTTCATATTTTATATTTCATATCCTGACCCATTAAACCAACGAGACGCAATCATCATGAGCCAACGACACC CCGAGAATGGACTATTTATT
Product: UDP-N-acetylmuramyl-tripeptide synthetase
Products: NA
Alternate protein names: Meso-A2pm-adding enzyme; Meso-diaminopimelate-adding enzyme; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase [H]
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MTHTQPAPHLRSIVNAAVKILPQHQSTLQLLRVPAVLDVPFSKFVLDSRQLAKRDASSAPAAFVLLKSQTQPLQKSQQYV QTALPQAAFIISEIDPQQLGLEGLDKPSDSSPDCPILFVPDIRDVLGTLIQLSLLSDDALSQIGDAQSLAQTLPQVIAVT GTNGKTTISQLMAQLCQFSEVAQLQNSAVMGTAGNGRLDSLVQASHTTGDALAVQGFLRKMGDEGVDLLALEASSHGLDQ QRLQGVPVTVALYTNLSRDHLDYHPDMQDYAQAKARLFDKAYFPQLTHAVINADDEFAPLMIETAQNSGVSVWLYSLQGD FIEKSDLQRNAYFIAKTIEPSLDGVKIEAATSFGPLTLHSPLLGRFNVANLLAAVAGAIALGIEPESIPALVKQLHGASG RMQRVSLDEQGSQPEQGVFIVDYAHTPDALTQVLTSLKSHCSGNLWAIFGCGGDRDKGKRPLMAQAGLATADKVVLTSDN PRSEDPQMILQDMQQGMSDEQHAKTTVIADRKQAIEYAVEHAAADDIVVIAGKGHETYQEIKGVRYDFDDRLVLQQALIA AHSSEASSR
Sequences:
>Translated_569_residues MTHTQPAPHLRSIVNAAVKILPQHQSTLQLLRVPAVLDVPFSKFVLDSRQLAKRDASSAPAAFVLLKSQTQPLQKSQQYV QTALPQAAFIISEIDPQQLGLEGLDKPSDSSPDCPILFVPDIRDVLGTLIQLSLLSDDALSQIGDAQSLAQTLPQVIAVT GTNGKTTISQLMAQLCQFSEVAQLQNSAVMGTAGNGRLDSLVQASHTTGDALAVQGFLRKMGDEGVDLLALEASSHGLDQ QRLQGVPVTVALYTNLSRDHLDYHPDMQDYAQAKARLFDKAYFPQLTHAVINADDEFAPLMIETAQNSGVSVWLYSLQGD FIEKSDLQRNAYFIAKTIEPSLDGVKIEAATSFGPLTLHSPLLGRFNVANLLAAVAGAIALGIEPESIPALVKQLHGASG RMQRVSLDEQGSQPEQGVFIVDYAHTPDALTQVLTSLKSHCSGNLWAIFGCGGDRDKGKRPLMAQAGLATADKVVLTSDN PRSEDPQMILQDMQQGMSDEQHAKTTVIADRKQAIEYAVEHAAADDIVVIAGKGHETYQEIKGVRYDFDDRLVLQQALIA AHSSEASSR >Mature_568_residues THTQPAPHLRSIVNAAVKILPQHQSTLQLLRVPAVLDVPFSKFVLDSRQLAKRDASSAPAAFVLLKSQTQPLQKSQQYVQ TALPQAAFIISEIDPQQLGLEGLDKPSDSSPDCPILFVPDIRDVLGTLIQLSLLSDDALSQIGDAQSLAQTLPQVIAVTG TNGKTTISQLMAQLCQFSEVAQLQNSAVMGTAGNGRLDSLVQASHTTGDALAVQGFLRKMGDEGVDLLALEASSHGLDQQ RLQGVPVTVALYTNLSRDHLDYHPDMQDYAQAKARLFDKAYFPQLTHAVINADDEFAPLMIETAQNSGVSVWLYSLQGDF IEKSDLQRNAYFIAKTIEPSLDGVKIEAATSFGPLTLHSPLLGRFNVANLLAAVAGAIALGIEPESIPALVKQLHGASGR MQRVSLDEQGSQPEQGVFIVDYAHTPDALTQVLTSLKSHCSGNLWAIFGCGGDRDKGKRPLMAQAGLATADKVVLTSDNP RSEDPQMILQDMQQGMSDEQHAKTTVIADRKQAIEYAVEHAAADDIVVIAGKGHETYQEIKGVRYDFDDRLVLQQALIAA HSSEASSR
Specific function: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan [H]
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family. MurE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786273, Length=390, Percent_Identity=41.025641025641, Blast_Score=256, Evalue=3e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005761 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.13 [H]
Molecular weight: Translated: 61375; Mature: 61244
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTQPAPHLRSIVNAAVKILPQHQSTLQLLRVPAVLDVPFSKFVLDSRQLAKRDASSAP CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCHHHHHHCHHHHHHCCCCCCC AAFVLLKSQTQPLQKSQQYVQTALPQAAFIISEIDPQQLGLEGLDKPSDSSPDCPILFVP EEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEECC DIRDVLGTLIQLSLLSDDALSQIGDAQSLAQTLPQVIAVTGTNGKTTISQLMAQLCQFSE CHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH VAQLQNSAVMGTAGNGRLDSLVQASHTTGDALAVQGFLRKMGDEGVDLLALEASSHGLDQ HHHHHCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH QRLQGVPVTVALYTNLSRDHLDYHPDMQDYAQAKARLFDKAYFPQLTHAVINADDEFAPL HHHCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE MIETAQNSGVSVWLYSLQGDFIEKSDLQRNAYFIAKTIEPSLDGVKIEAATSFGPLTLHS EEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEECC PLLGRFNVANLLAAVAGAIALGIEPESIPALVKQLHGASGRMQRVSLDEQGSQPEQGVFI CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEE VDYAHTPDALTQVLTSLKSHCSGNLWAIFGCGGDRDKGKRPLMAQAGLATADKVVLTSDN EEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCEEEEECCC PRSEDPQMILQDMQQGMSDEQHAKTTVIADRKQAIEYAVEHAAADDIVVIAGKGHETYQE CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH IKGVRYDFDDRLVLQQALIAAHSSEASSR HCCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure THTQPAPHLRSIVNAAVKILPQHQSTLQLLRVPAVLDVPFSKFVLDSRQLAKRDASSAP CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCHHHHHHCHHHHHHCCCCCCC AAFVLLKSQTQPLQKSQQYVQTALPQAAFIISEIDPQQLGLEGLDKPSDSSPDCPILFVP EEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEECC DIRDVLGTLIQLSLLSDDALSQIGDAQSLAQTLPQVIAVTGTNGKTTISQLMAQLCQFSE CHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH VAQLQNSAVMGTAGNGRLDSLVQASHTTGDALAVQGFLRKMGDEGVDLLALEASSHGLDQ HHHHHCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH QRLQGVPVTVALYTNLSRDHLDYHPDMQDYAQAKARLFDKAYFPQLTHAVINADDEFAPL HHHCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE MIETAQNSGVSVWLYSLQGDFIEKSDLQRNAYFIAKTIEPSLDGVKIEAATSFGPLTLHS EEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEECC PLLGRFNVANLLAAVAGAIALGIEPESIPALVKQLHGASGRMQRVSLDEQGSQPEQGVFI CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEE VDYAHTPDALTQVLTSLKSHCSGNLWAIFGCGGDRDKGKRPLMAQAGLATADKVVLTSDN EEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCEEEEECCC PRSEDPQMILQDMQQGMSDEQHAKTTVIADRKQAIEYAVEHAAADDIVVIAGKGHETYQE CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH IKGVRYDFDDRLVLQQALIAAHSSEASSR HCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]