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The map label for this gene is trbC [C]

Identifier: 148550814

GI number: 148550814

Start: 283528

End: 284271

Strand: Direct

Name: trbC [C]

Synonym: Swit_5378

Alternate gene names: 148550814

Gene position: 283528-284271 (Clockwise)

Preceding gene: 148550813

Following gene: 148550815

Centisome position: 91.39

GC content: 64.52

Gene sequence:

>744_bases
ATGCGTTTCGCTGCCTGGGGCGTTGCTGCCCTGCTTGCTACCGCCGGTGTATCGGCGCTGCTCGCCCAGACCGTTGACGG
TCTCGACGTGCAGGCCATCAAAAAGCGCTCGGCCGACCTTGCCGCGGATGCCGAAGCCTTCGTGAACCACGTCAAGGATC
GCGGCGACCAGTTCCGCGAGGAGGCCGTCGCGGTGCGCGAAGCCGGCACTGAAAACATGCGACAGGTCGCGGCCAAGGAT
CTGCCCAAGGGGCCCGACGGCGCGATCGACTTCGATGAGATCGTGCAAGGCGCCGCCGGTAATGCCAGCGTCAAGAGTGG
CGAGGCGCCGCAATTCATCGTCTTTGCCAGCCTCTCGATGCCGCCGCAGTCCCTGAAGCCGCTTATCCGCGATACGGCGC
GCGCGGGCGGCGTCGTGGTGTTCCGCGGCTTTCCGAACAACAGCATGAAGGAGTTTGCGACCCGGCTCGGGCAGATCGTC
GAGCGCCAGGACGAATTCGCCAATGTCGGCATCGATCCGCGACTGTTCCGAGCCTTCAATGTGCAGGCGGTCCCGACCTA
TGTTGCCGTGTCGTCCGATTTCGACCTGTGCGCCGGCTTTTCCTGCCAGACAAAGGTGCCGCCCTATGACCGCATGACGG
GCAATGTCACCGTGGAATATGCGCTCAGCAGCTTTGCCGACGGCTATGGTCCGGGCGCCCGGGTCGCCGCCGTTGGCCTC
TCAAATATGCGGATGCAGCGCTGA

Upstream 100 bases:

>100_bases
ATGCCGCCCGACGCGGGTCGCGCCTATCCCGCCGGCGGCGAGGACATGGGCTACCTCGTCTGGCGCAAGCGCAACTGTTG
TGTCCTGTAGGGAGGGGTCG

Downstream 100 bases:

>100_bases
TGCGCCTCGCGCTCGCAATCAGTCTCGCGGTCCTGGCCGGGGCCAGCTTCCCCGCGCAGGCGCAGACCACGCTGGAGGAA
GCGCGCGAGCAGGGAAAGGC

Product: Type-F conjugative transfer system pilin assembly protein TrbC

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRFAAWGVAALLATAGVSALLAQTVDGLDVQAIKKRSADLAADAEAFVNHVKDRGDQFREEAVAVREAGTENMRQVAAKD
LPKGPDGAIDFDEIVQGAAGNASVKSGEAPQFIVFASLSMPPQSLKPLIRDTARAGGVVVFRGFPNNSMKEFATRLGQIV
ERQDEFANVGIDPRLFRAFNVQAVPTYVAVSSDFDLCAGFSCQTKVPPYDRMTGNVTVEYALSSFADGYGPGARVAAVGL
SNMRMQR

Sequences:

>Translated_247_residues
MRFAAWGVAALLATAGVSALLAQTVDGLDVQAIKKRSADLAADAEAFVNHVKDRGDQFREEAVAVREAGTENMRQVAAKD
LPKGPDGAIDFDEIVQGAAGNASVKSGEAPQFIVFASLSMPPQSLKPLIRDTARAGGVVVFRGFPNNSMKEFATRLGQIV
ERQDEFANVGIDPRLFRAFNVQAVPTYVAVSSDFDLCAGFSCQTKVPPYDRMTGNVTVEYALSSFADGYGPGARVAAVGL
SNMRMQR
>Mature_247_residues
MRFAAWGVAALLATAGVSALLAQTVDGLDVQAIKKRSADLAADAEAFVNHVKDRGDQFREEAVAVREAGTENMRQVAAKD
LPKGPDGAIDFDEIVQGAAGNASVKSGEAPQFIVFASLSMPPQSLKPLIRDTARAGGVVVFRGFPNNSMKEFATRLGQIV
ERQDEFANVGIDPRLFRAFNVQAVPTYVAVSSDFDLCAGFSCQTKVPPYDRMTGNVTVEYALSSFADGYGPGARVAAVGL
SNMRMQR

Specific function: Essential For F Plasmid Conjugative Transfer, Participates In F-Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26337; Mature: 26337

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAAWGVAALLATAGVSALLAQTVDGLDVQAIKKRSADLAADAEAFVNHVKDRGDQFRE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EAVAVREAGTENMRQVAAKDLPKGPDGAIDFDEIVQGAAGNASVKSGEAPQFIVFASLSM
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
PPQSLKPLIRDTARAGGVVVFRGFPNNSMKEFATRLGQIVERQDEFANVGIDPRLFRAFN
CHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
VQAVPTYVAVSSDFDLCAGFSCQTKVPPYDRMTGNVTVEYALSSFADGYGPGARVAAVGL
CEECCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCEEHHCH
SNMRMQR
HHHHCCC
>Mature Secondary Structure
MRFAAWGVAALLATAGVSALLAQTVDGLDVQAIKKRSADLAADAEAFVNHVKDRGDQFRE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EAVAVREAGTENMRQVAAKDLPKGPDGAIDFDEIVQGAAGNASVKSGEAPQFIVFASLSM
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
PPQSLKPLIRDTARAGGVVVFRGFPNNSMKEFATRLGQIVERQDEFANVGIDPRLFRAFN
CHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
VQAVPTYVAVSSDFDLCAGFSCQTKVPPYDRMTGNVTVEYALSSFADGYGPGARVAAVGL
CEECCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCEEHHCH
SNMRMQR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA