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The map label for this gene is traN [H]

Identifier: 148550815

GI number: 148550815

Start: 284271

End: 286133

Strand: Direct

Name: traN [H]

Synonym: Swit_5379

Alternate gene names: 148550815

Gene position: 284271-286133 (Clockwise)

Preceding gene: 148550814

Following gene: 148550816

Centisome position: 91.63

GC content: 62.05

Gene sequence:

>1863_bases
ATGCGCCTCGCGCTCGCAATCAGTCTCGCGGTCCTGGCCGGGGCCAGCTTCCCCGCGCAGGCGCAGACCACGCTGGAGGA
AGCGCGCGAGCAGGGAAAGGCGATGGGAGCCGCGGCCAAGGCCAATCCGGTCCTGGTGCCCAGCGACAACGCGCAGGCGG
AAGCCGTGCCGGGGTTCTCTGGGACGACCCTCCCGCAGGGCAGCTATTTCGATGATCCGGACAAGCTGATCAACGATGCA
CAAGCGCTCAAGTCGAGCAGCGAGCAGTACCAGATCACGACCGACAGCAGCCATGTGCGCCCGACCTTCAGCAATGCCGA
GATCCTCTCGACGACTAATCGAGCGACCACCATTGAGGAGGATCCCTCCACCTATCTGGCGGGCGAGGCTTACGGCGGGA
CGAGCGGAAGCTGCACCGCGCTTCCGCCTGGATCGGGCACGAGCGGCTATTATGAGGCGAGTTGCAACGCGGGCGCCAAG
GTAACGACCAACGCCCGCAGTTGCACCGTCAACCTGGATGTGCGCACCGAGAAGCGCACGATCTACACTTATTATGCGGG
ACGTTTGAGTTTCCTGCCGAGCGATGGCGGCCCCTATCCGGCCCGTGCCGCGTTCGACGATGAAATCGCTTCGGGAGTCT
GCTGGGAAAGCCGACCCATCGACTATTGCGACAATATGGCTGCCTATGGCTATACGGCGGCCGACACCTGCAAGAGCCTG
GGTCACACGGCCGTCGAGGTGAAGTGCAGCGCTGAAGCGCAAGGGATTACGCAAGGCGCCTATCACCCCGGCACGGTGAT
TTCGACCGGCAACTACTGGCTGACCAGGCAGGAGGAACCGGCGGTTCCCGTCATCACCCGCAACGAGGGTTTCTGCGCGG
CCTATACCGGCGACAGCAACTGCACGCTGGAATCGGAGATCTGCACGGCAAGCGATCCGGTTACCCGGATCGTCGATGGC
GTGCCTGTCACGCAGCCGTGCTGGGCGTGGCAGCGCAGCTACCAGTGCCACACCATTTCGTCGGCCAACGACTGCTCGGA
ACTCGAAGCCAATGGCAGTTGCACCTATCAGCGCACCGAATGCCTGGACGAGGATCCTGACGGCGGACCCTGCAAGGTCC
AGGAGAAGATCTATCGCTGCCCGACGCCGTCGGGCACCTCGGCCGACGCCCCGCAATATATCTGCGGCAACGACGTCTAT
TGCATCAACGGCGACTGCGAGCCGATCGAACGGCAGGCTTCGACCGAATTCAAGGACGCGCTGGTGGCGCTGCACTCGAT
CGACCAGGCCGGCAAGGAGTTCGACGAAACCAATTACCGGGTGTTTTCGGGCACACGCGAGACCTGCCATAAGCCGGTAT
TTGGCCTCATCAACTGCTGTGCCGGCAAGGTTTCGGGATTGGTGCCGGTAGCGGCGGGGGCGGCCGCTCTGGCGGGCGGG
CCGGCTGCGATCGCGGCCTTCGCCACGCCGTTCCTCGTGTTGTTCGCCTGTTCTCAGGACGAGATGAGGCTCGATATCAA
GGACCGGATGGGCTTTTGCCACAAACTGGGCACCTACTGCTCATCGAGTTTCCTGGGCATCTGCAAGACCAAGCGCACGG
CCTATTGCTGCTTTGAAAGCAAGCTTTCGCGGATCCTGCAGGAGCAGGGCCGGGTGCAGTTGGGAAAGCCCTGGGGGGCG
CCCAAGAAGGAGCAGTGCCAGGGTTTCACGATCGAGGAATTCGCCTCGCTCGACCTTTCGGTGATGGATTTCACCGAAAT
CTATTCGGACTTCCTGGATGCAGCAAAGCTTCCCGACGAAGTCCAGACGATGACGGACATTCAGTCGAAGATACAGGATT
ACTATGATCTCCACGGCAAATGA

Upstream 100 bases:

>100_bases
ATGTCACCGTGGAATATGCGCTCAGCAGCTTTGCCGACGGCTATGGTCCGGGCGCCCGGGTCGCCGCCGTTGGCCTCTCA
AATATGCGGATGCAGCGCTG

Downstream 100 bases:

>100_bases
TCCGGGGCTACCCCGCGATGCCGGGGACGAAAGCGCGATGACGGTTCTCGAGCTGTCGATCTTCGTCTGCGCCTTCCGCG
CCCGCACCCCCATCCGAGCA

Product: conjugal transfer mating pair stabilization protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MRLALAISLAVLAGASFPAQAQTTLEEAREQGKAMGAAAKANPVLVPSDNAQAEAVPGFSGTTLPQGSYFDDPDKLINDA
QALKSSSEQYQITTDSSHVRPTFSNAEILSTTNRATTIEEDPSTYLAGEAYGGTSGSCTALPPGSGTSGYYEASCNAGAK
VTTNARSCTVNLDVRTEKRTIYTYYAGRLSFLPSDGGPYPARAAFDDEIASGVCWESRPIDYCDNMAAYGYTAADTCKSL
GHTAVEVKCSAEAQGITQGAYHPGTVISTGNYWLTRQEEPAVPVITRNEGFCAAYTGDSNCTLESEICTASDPVTRIVDG
VPVTQPCWAWQRSYQCHTISSANDCSELEANGSCTYQRTECLDEDPDGGPCKVQEKIYRCPTPSGTSADAPQYICGNDVY
CINGDCEPIERQASTEFKDALVALHSIDQAGKEFDETNYRVFSGTRETCHKPVFGLINCCAGKVSGLVPVAAGAAALAGG
PAAIAAFATPFLVLFACSQDEMRLDIKDRMGFCHKLGTYCSSSFLGICKTKRTAYCCFESKLSRILQEQGRVQLGKPWGA
PKKEQCQGFTIEEFASLDLSVMDFTEIYSDFLDAAKLPDEVQTMTDIQSKIQDYYDLHGK

Sequences:

>Translated_620_residues
MRLALAISLAVLAGASFPAQAQTTLEEAREQGKAMGAAAKANPVLVPSDNAQAEAVPGFSGTTLPQGSYFDDPDKLINDA
QALKSSSEQYQITTDSSHVRPTFSNAEILSTTNRATTIEEDPSTYLAGEAYGGTSGSCTALPPGSGTSGYYEASCNAGAK
VTTNARSCTVNLDVRTEKRTIYTYYAGRLSFLPSDGGPYPARAAFDDEIASGVCWESRPIDYCDNMAAYGYTAADTCKSL
GHTAVEVKCSAEAQGITQGAYHPGTVISTGNYWLTRQEEPAVPVITRNEGFCAAYTGDSNCTLESEICTASDPVTRIVDG
VPVTQPCWAWQRSYQCHTISSANDCSELEANGSCTYQRTECLDEDPDGGPCKVQEKIYRCPTPSGTSADAPQYICGNDVY
CINGDCEPIERQASTEFKDALVALHSIDQAGKEFDETNYRVFSGTRETCHKPVFGLINCCAGKVSGLVPVAAGAAALAGG
PAAIAAFATPFLVLFACSQDEMRLDIKDRMGFCHKLGTYCSSSFLGICKTKRTAYCCFESKLSRILQEQGRVQLGKPWGA
PKKEQCQGFTIEEFASLDLSVMDFTEIYSDFLDAAKLPDEVQTMTDIQSKIQDYYDLHGK
>Mature_620_residues
MRLALAISLAVLAGASFPAQAQTTLEEAREQGKAMGAAAKANPVLVPSDNAQAEAVPGFSGTTLPQGSYFDDPDKLINDA
QALKSSSEQYQITTDSSHVRPTFSNAEILSTTNRATTIEEDPSTYLAGEAYGGTSGSCTALPPGSGTSGYYEASCNAGAK
VTTNARSCTVNLDVRTEKRTIYTYYAGRLSFLPSDGGPYPARAAFDDEIASGVCWESRPIDYCDNMAAYGYTAADTCKSL
GHTAVEVKCSAEAQGITQGAYHPGTVISTGNYWLTRQEEPAVPVITRNEGFCAAYTGDSNCTLESEICTASDPVTRIVDG
VPVTQPCWAWQRSYQCHTISSANDCSELEANGSCTYQRTECLDEDPDGGPCKVQEKIYRCPTPSGTSADAPQYICGNDVY
CINGDCEPIERQASTEFKDALVALHSIDQAGKEFDETNYRVFSGTRETCHKPVFGLINCCAGKVSGLVPVAAGAAALAGG
PAAIAAFATPFLVLFACSQDEMRLDIKDRMGFCHKLGTYCSSSFLGICKTKRTAYCCFESKLSRILQEQGRVQLGKPWGA
PKKEQCQGFTIEEFASLDLSVMDFTEIYSDFLDAAKLPDEVQTMTDIQSKIQDYYDLHGK

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 66558; Mature: 66558

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALAISLAVLAGASFPAQAQTTLEEAREQGKAMGAAAKANPVLVPSDNAQAEAVPGFS
CEEHHEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
GTTLPQGSYFDDPDKLINDAQALKSSSEQYQITTDSSHVRPTFSNAEILSTTNRATTIEE
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEECC
DPSTYLAGEAYGGTSGSCTALPPGSGTSGYYEASCNAGAKVTTNARSCTVNLDVRTEKRT
CCCCEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEECCCEEEEEEEEEECCEE
IYTYYAGRLSFLPSDGGPYPARAAFDDEIASGVCWESRPIDYCDNMAAYGYTAADTCKSL
EEEEEECEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHCCHHHCCCCHHHHHHHC
GHTAVEVKCSAEAQGITQGAYHPGTVISTGNYWLTRQEEPAVPVITRNEGFCAAYTGDSN
CCEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEECCCCEEEEEECCCC
CTLESEICTASDPVTRIVDGVPVTQPCWAWQRSYQCHTISSANDCSELEANGSCTYQRTE
CEECCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCEEEECCCCCCHHHHCCCCCEEEHHHH
CLDEDPDGGPCKVQEKIYRCPTPSGTSADAPQYICGNDVYCINGDCEPIERQASTEFKDA
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHH
LVALHSIDQAGKEFDETNYRVFSGTRETCHKPVFGLINCCAGKVSGLVPVAAGAAALAGG
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHCHHHHHHHHHHHHHCCCCHHHCCHHHHCCC
PAAIAAFATPFLVLFACSQDEMRLDIKDRMGFCHKLGTYCSSSFLGICKTKRTAYCCFES
HHHHHHHHHHHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHHH
KLSRILQEQGRVQLGKPWGAPKKEQCQGFTIEEFASLDLSVMDFTEIYSDFLDAAKLPDE
HHHHHHHHCCCEEECCCCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHH
VQTMTDIQSKIQDYYDLHGK
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLALAISLAVLAGASFPAQAQTTLEEAREQGKAMGAAAKANPVLVPSDNAQAEAVPGFS
CEEHHEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
GTTLPQGSYFDDPDKLINDAQALKSSSEQYQITTDSSHVRPTFSNAEILSTTNRATTIEE
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEECC
DPSTYLAGEAYGGTSGSCTALPPGSGTSGYYEASCNAGAKVTTNARSCTVNLDVRTEKRT
CCCCEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEECCCEEEEEEEEEECCEE
IYTYYAGRLSFLPSDGGPYPARAAFDDEIASGVCWESRPIDYCDNMAAYGYTAADTCKSL
EEEEEECEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHCCHHHCCCCHHHHHHHC
GHTAVEVKCSAEAQGITQGAYHPGTVISTGNYWLTRQEEPAVPVITRNEGFCAAYTGDSN
CCEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEECCCCEEEEEECCCC
CTLESEICTASDPVTRIVDGVPVTQPCWAWQRSYQCHTISSANDCSELEANGSCTYQRTE
CEECCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCEEEECCCCCCHHHHCCCCCEEEHHHH
CLDEDPDGGPCKVQEKIYRCPTPSGTSADAPQYICGNDVYCINGDCEPIERQASTEFKDA
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHH
LVALHSIDQAGKEFDETNYRVFSGTRETCHKPVFGLINCCAGKVSGLVPVAAGAAALAGG
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHCHHHHHHHHHHHHHCCCCHHHCCHHHHCCC
PAAIAAFATPFLVLFACSQDEMRLDIKDRMGFCHKLGTYCSSSFLGICKTKRTAYCCFES
HHHHHHHHHHHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHHH
KLSRILQEQGRVQLGKPWGAPKKEQCQGFTIEEFASLDLSVMDFTEIYSDFLDAAKLPDE
HHHHHHHHCCCEEECCCCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHH
VQTMTDIQSKIQDYYDLHGK
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]