Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550766
Identifier: 148550766
GI number: 148550766
Start: 231485
End: 232291
Strand: Reverse
Name: 148550766
Synonym: Swit_5330
Alternate gene names: NA
Gene position: 232291-231485 (Counterclockwise)
Preceding gene: 148550767
Following gene: 148550758
Centisome position: 74.88
GC content: 58.24
Gene sequence:
>807_bases TTGGCCTTCAGCTATACGCTCTTTCTCGTCCTACTGCTGATATTCCCGGGTCTATGTTTCTGGGCCGGCTGGCGCTTCGG GGAGCGAACCGACTTCCTCAGTCCCTCGCCTGACGTTCCAAACTCAACACTGACCCTGTTCATCGTCGTCATCGGCACGC TTCTGGGTCATCTTCTAGGCACCACTGCTTATACTTTGCAGAGCCTGTGGTGCCGAACCGGGCTGTGCCTCTCCATCTCC TTCGATCCCAACATCTATCGCGCTCTGGTGAAAGGCGTTGAAGGTGCAGGGACAGCGCCCGATGCCGCTTTCGAAATATG GCTTTTCTCGATGTTGATGGTCGGAATCGGCACGGGCTCACTGGCCTACTGGCTGTCGCGGCAAAAATGGGTGACCGATC GGCTCGATCCCGTCGCGTTTGGATGGCTGGCTCCGGCCGTCCAGGCAGTCAAACGAGGTGATTCCTTCGTCGTCGCCTAT GTGTTGACCGGAACGAGCCACGAAGGCTCTTCCATTGCCTATGAGGGGACAGTTCAGCAACTCGCCCTTGATGGCGACCA ATCGATAAAGCTGATCGTCCTCAACGATGTGGATAGATTCCTGGTCAAGATCACCGACAACGGACTCCAACGTCTAGAAT CCGAAGCTACGCCGATCGTTCAGCTGCAGATCGCCGGCGACGAGATCGTCAATGTAGCGCTGGAGATCGTTCGTGCGCCC GAGCAGGACGTAGCTGCCGTCGAGGAAGCAGGCGAGGAAGCGCACGATCCCGCGCCGTCGCGGAATCCGGAACGGACACC GCGCTGA
Upstream 100 bases:
>100_bases GGCAGCGCGCGTCGAAAATGGCATCTACATCATCGAGCCTGGCGCTGCCGGCGATGAGAAAACGAGCCAGGAAAGCCTGC AGCCCGCCGGGGCCTGATCC
Downstream 100 bases:
>100_bases AGCCTTAAGCAAGCGCCAAACATCCGGTCCTCAGAGGGAACAGATCAGGCAGCCATCCCGCAAACCTGGATCGTCCTCCG GCTCCAACCCGCCCAACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAFSYTLFLVLLLIFPGLCFWAGWRFGERTDFLSPSPDVPNSTLTLFIVVIGTLLGHLLGTTAYTLQSLWCRTGLCLSIS FDPNIYRALVKGVEGAGTAPDAAFEIWLFSMLMVGIGTGSLAYWLSRQKWVTDRLDPVAFGWLAPAVQAVKRGDSFVVAY VLTGTSHEGSSIAYEGTVQQLALDGDQSIKLIVLNDVDRFLVKITDNGLQRLESEATPIVQLQIAGDEIVNVALEIVRAP EQDVAAVEEAGEEAHDPAPSRNPERTPR
Sequences:
>Translated_268_residues MAFSYTLFLVLLLIFPGLCFWAGWRFGERTDFLSPSPDVPNSTLTLFIVVIGTLLGHLLGTTAYTLQSLWCRTGLCLSIS FDPNIYRALVKGVEGAGTAPDAAFEIWLFSMLMVGIGTGSLAYWLSRQKWVTDRLDPVAFGWLAPAVQAVKRGDSFVVAY VLTGTSHEGSSIAYEGTVQQLALDGDQSIKLIVLNDVDRFLVKITDNGLQRLESEATPIVQLQIAGDEIVNVALEIVRAP EQDVAAVEEAGEEAHDPAPSRNPERTPR >Mature_267_residues AFSYTLFLVLLLIFPGLCFWAGWRFGERTDFLSPSPDVPNSTLTLFIVVIGTLLGHLLGTTAYTLQSLWCRTGLCLSISF DPNIYRALVKGVEGAGTAPDAAFEIWLFSMLMVGIGTGSLAYWLSRQKWVTDRLDPVAFGWLAPAVQAVKRGDSFVVAYV LTGTSHEGSSIAYEGTVQQLALDGDQSIKLIVLNDVDRFLVKITDNGLQRLESEATPIVQLQIAGDEIVNVALEIVRAPE QDVAAVEEAGEEAHDPAPSRNPERTPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29245; Mature: 29114
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSYTLFLVLLLIFPGLCFWAGWRFGERTDFLSPSPDVPNSTLTLFIVVIGTLLGHLLG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TTAYTLQSLWCRTGLCLSISFDPNIYRALVKGVEGAGTAPDAAFEIWLFSMLMVGIGTGS HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCH LAYWLSRQKWVTDRLDPVAFGWLAPAVQAVKRGDSFVVAYVLTGTSHEGSSIAYEGTVQQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCHHHH LALDGDQSIKLIVLNDVDRFLVKITDNGLQRLESEATPIVQLQIAGDEIVNVALEIVRAP HEECCCCCEEEEEECCCCCHHEEHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC EQDVAAVEEAGEEAHDPAPSRNPERTPR CHHHHHHHHCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure AFSYTLFLVLLLIFPGLCFWAGWRFGERTDFLSPSPDVPNSTLTLFIVVIGTLLGHLLG CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TTAYTLQSLWCRTGLCLSISFDPNIYRALVKGVEGAGTAPDAAFEIWLFSMLMVGIGTGS HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCH LAYWLSRQKWVTDRLDPVAFGWLAPAVQAVKRGDSFVVAYVLTGTSHEGSSIAYEGTVQQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCHHHH LALDGDQSIKLIVLNDVDRFLVKITDNGLQRLESEATPIVQLQIAGDEIVNVALEIVRAP HEECCCCCEEEEEECCCCCHHEEHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC EQDVAAVEEAGEEAHDPAPSRNPERTPR CHHHHHHHHCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA