Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550767
Identifier: 148550767
GI number: 148550767
Start: 232295
End: 232543
Strand: Reverse
Name: 148550767
Synonym: Swit_5331
Alternate gene names: NA
Gene position: 232543-232295 (Counterclockwise)
Preceding gene: 148550770
Following gene: 148550766
Centisome position: 74.96
GC content: 63.05
Gene sequence:
>249_bases TTGCGACCGGGGCACCGAGATAGGGATTGGACGTTTCCGTTCCACGCGCTACATTGGGATCGGAGACACAACATGCGCCT GAACACTGCCAAGTCGATGAAGCTCGCGCGCCGCGTGAAGGGCCAGTTTGGCACCTGGCAGGCCGTGCGCAAGGCAGCGC GCGTCGAAAATGGCATCTACATCATCGAGCCTGGCGCTGCCGGCGATGAGAAAACGAGCCAGGAAAGCCTGCAGCCCGCC GGGGCCTGA
Upstream 100 bases:
>100_bases ATTTGCCGGGCACGACGCCAGAGAGACACGTGCTGTGGCCTGGCACGTTTTCGGATTTAGCCTGAGAGGCACGGGAGGCG CTTAACAGCCCTTCCTTGCA
Downstream 100 bases:
>100_bases TCCTTGGCCTTCAGCTATACGCTCTTTCTCGTCCTACTGCTGATATTCCCGGGTCTATGTTTCTGGGCCGGCTGGCGCTT CGGGGAGCGAACCGACTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRPGHRDRDWTFPFHALHWDRRHNMRLNTAKSMKLARRVKGQFGTWQAVRKAARVENGIYIIEPGAAGDEKTSQESLQPA GA
Sequences:
>Translated_82_residues MRPGHRDRDWTFPFHALHWDRRHNMRLNTAKSMKLARRVKGQFGTWQAVRKAARVENGIYIIEPGAAGDEKTSQESLQPA GA >Mature_82_residues MRPGHRDRDWTFPFHALHWDRRHNMRLNTAKSMKLARRVKGQFGTWQAVRKAARVENGIYIIEPGAAGDEKTSQESLQPA GA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9412; Mature: 9412
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPGHRDRDWTFPFHALHWDRRHNMRLNTAKSMKLARRVKGQFGTWQAVRKAARVENGIY CCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEE IIEPGAAGDEKTSQESLQPAGA EECCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MRPGHRDRDWTFPFHALHWDRRHNMRLNTAKSMKLARRVKGQFGTWQAVRKAARVENGIY CCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEE IIEPGAAGDEKTSQESLQPAGA EECCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA