Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550758
Identifier: 148550758
GI number: 148550758
Start: 219730
End: 220209
Strand: Reverse
Name: 148550758
Synonym: Swit_5322
Alternate gene names: NA
Gene position: 220209-219730 (Counterclockwise)
Preceding gene: 148550766
Following gene: 148550757
Centisome position: 70.98
GC content: 59.17
Gene sequence:
>480_bases ATGTTCGACTGGCTGAAGCAGCAATTGCGCGGTGCCCCATCGGCGAAGGTGGTGAAACTGCCCGGGCAAACGGAGAAAGC AGCTCTGGTCATCTCCGATGACGAAATTCGAGCGGCTTTCCGCCAGGCAACCCTCAATCATCTGGCCGACGTCCACGGTC TGAAGCCGGTCTACTGCTCCGATCTGCAGTCTGAAAAGGCGTTCGAAGCGGCCCAGGCAGACATGCCTCTCATCGCCGTC TGGAACGAGCACCAAAGGCCGGACGGCCTAGCCTTCTCCCTCTCGGTCAATATGCTGCTCGTTAAAGCGGCGCTCCTGGA ATATATGGAGGAACTAGATCCCTGGTTCGACGAGGAGTGCGCGCGCATAGCCGCCGATCTCAAGGACCTTACCTATAATA CGATCGTCCAAACCGCGACCGAAACCGGATGGACCCCCAGCGCGATCTGCACAGCACTCGCCGACAAGCCGAACGCCTGA
Upstream 100 bases:
>100_bases GCCCGCATGCTGCCCGAGTCCCTGATTTATCGCTCTTCCCAAGACGAAACACTCAGATATTCTTATCAGCAGGCGTGGAC CCTGGGTTGGAGCATTTCGC
Downstream 100 bases:
>100_bases GCCAAAGGCGATGGCCCTCAATGACCTGCTAGCAAACCGCATCTACGCGAATAGCGCGCCTGCCACCCCCACCGCTCTCA CCGAAGACACCGCGATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MFDWLKQQLRGAPSAKVVKLPGQTEKAALVISDDEIRAAFRQATLNHLADVHGLKPVYCSDLQSEKAFEAAQADMPLIAV WNEHQRPDGLAFSLSVNMLLVKAALLEYMEELDPWFDEECARIAADLKDLTYNTIVQTATETGWTPSAICTALADKPNA
Sequences:
>Translated_159_residues MFDWLKQQLRGAPSAKVVKLPGQTEKAALVISDDEIRAAFRQATLNHLADVHGLKPVYCSDLQSEKAFEAAQADMPLIAV WNEHQRPDGLAFSLSVNMLLVKAALLEYMEELDPWFDEECARIAADLKDLTYNTIVQTATETGWTPSAICTALADKPNA >Mature_159_residues MFDWLKQQLRGAPSAKVVKLPGQTEKAALVISDDEIRAAFRQATLNHLADVHGLKPVYCSDLQSEKAFEAAQADMPLIAV WNEHQRPDGLAFSLSVNMLLVKAALLEYMEELDPWFDEECARIAADLKDLTYNTIVQTATETGWTPSAICTALADKPNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17574; Mature: 17574
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDWLKQQLRGAPSAKVVKLPGQTEKAALVISDDEIRAAFRQATLNHLADVHGLKPVYCS CCHHHHHHHCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHC DLQSEKAFEAAQADMPLIAVWNEHQRPDGLAFSLSVNMLLVKAALLEYMEELDPWFDEEC CCCHHHHHHHHHCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHH ARIAADLKDLTYNTIVQTATETGWTPSAICTALADKPNA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MFDWLKQQLRGAPSAKVVKLPGQTEKAALVISDDEIRAAFRQATLNHLADVHGLKPVYCS CCHHHHHHHCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHC DLQSEKAFEAAQADMPLIAVWNEHQRPDGLAFSLSVNMLLVKAALLEYMEELDPWFDEEC CCCHHHHHHHHHCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHH ARIAADLKDLTYNTIVQTATETGWTPSAICTALADKPNA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA