Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
---|---|
Accession | NC_009507 |
Length | 310,228 |
Click here to switch to the map view.
The map label for this gene is 148550725
Identifier: 148550725
GI number: 148550725
Start: 189828
End: 190097
Strand: Direct
Name: 148550725
Synonym: Swit_5289
Alternate gene names: NA
Gene position: 189828-190097 (Clockwise)
Preceding gene: 148550724
Following gene: 148550726
Centisome position: 61.19
GC content: 61.11
Gene sequence:
>270_bases ATGCCACTCTACTTTTTCGACATCTACAATGACGAAACGACCGAGGATGATAACGGCATCGAACTTGCCGATAGCGAGGC GGCGCTGAAGCGCGCCCGCGCCGAGGCGCAGAACCTGGCTGCAGAATCCATCCGCGAGCACGGCCATCTCATCCTCGATC ACCGCATCGTGGTGCGCGACGGGAATGGCGCGACGATCGGCGAGGTTCGTTTCGACGAGGCGGTCGAAGTGCGCCAAAGC GGCGGCAAGAGCGAGCCTCGACGATCATAA
Upstream 100 bases:
>100_bases CTCCGGGAACGCCCGCGTTTGACACGACGTTGCACGGACAAAGGCCGAAGATGACAGATGCTCCGCAACTTCTTGGCCCG ATGCAGGACATACCTCGACC
Downstream 100 bases:
>100_bases ACGGCCCGCCACCGGCCGCGATGGGCTGGACCGGGAATTCCGATGCCGGCGCGGAAGAGCGCCCGCGCTGCTCCGGCAGC CTGACGCACGGTGAGGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPLYFFDIYNDETTEDDNGIELADSEAALKRARAEAQNLAAESIREHGHLILDHRIVVRDGNGATIGEVRFDEAVEVRQS GGKSEPRRS
Sequences:
>Translated_89_residues MPLYFFDIYNDETTEDDNGIELADSEAALKRARAEAQNLAAESIREHGHLILDHRIVVRDGNGATIGEVRFDEAVEVRQS GGKSEPRRS >Mature_88_residues PLYFFDIYNDETTEDDNGIELADSEAALKRARAEAQNLAAESIREHGHLILDHRIVVRDGNGATIGEVRFDEAVEVRQSG GKSEPRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9941; Mature: 9810
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLYFFDIYNDETTEDDNGIELADSEAALKRARAEAQNLAAESIREHGHLILDHRIVVRD CCEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEC GNGATIGEVRFDEAVEVRQSGGKSEPRRS CCCCEECCEECHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PLYFFDIYNDETTEDDNGIELADSEAALKRARAEAQNLAAESIREHGHLILDHRIVVRD CEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEC GNGATIGEVRFDEAVEVRQSGGKSEPRRS CCCCEECCEECHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA