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The map label for this gene is 148550671

Identifier: 148550671

GI number: 148550671

Start: 125737

End: 127173

Strand: Direct

Name: 148550671

Synonym: Swit_5234

Alternate gene names: NA

Gene position: 125737-127173 (Clockwise)

Preceding gene: 148550668

Following gene: 148550672

Centisome position: 40.53

GC content: 75.37

Gene sequence:

>1437_bases
TTGGCGGCGTGGGGCCGGGACCTGCACCGACGCGCGCAGCGCGGGAGGGGAACCCCTGAAAGGCGCTGGCGCGGGCCGCC
GCGCAGCGGCAACACGGGCGCCTGGAACGGGGTTGCCGGGCCCGGTCCCCTCGCCGCAGGTGTCACGTCAACGGCGCGGA
AGGGACGCTGGCAGCCCTGGCCGGCGGTGAACGGACAATCGTCAGGCCGCCCTCCAGGATCGGCTCCCCGGCAATGGCCC
CGTCACCCGGCGCGGCGGCGAGGCTCATGCGCCGGCAGACCGGCCCCAACGCGGGCGCAGGGCGAGCGACCAATGGCGCG
CCGACGGGGCCACCTGGGATACGACGCGGCCCCGGGCGCCCGGCAACCTTGCGCAAGGCGGGCGGCCCGCGCCCGCCGAT
GCTATCGGTTCGGGCCGGAGCAGCGCATCAGCGCCCGCGCGCCGTCAGGGTTGGACGAGGGACTCCGCCCAGGTGCCGAG
CACAGCCCCGTCGGCGGGGTTCTCGATGCGCACCTCGTCGAGCGTGACGGCGAGGAGGCACACCGGCCGCTGGTCCGGCC
CGGCGGCCTGGGTGCAGCGCAGGCTGCCGCCATCCGGAAGGCGGGCAACCCGGCCGATGAGCCGGATACGGAGCCCCTTC
GGCCCGGGCGCTGCGTCCGGCGCCAGCCGCTTGACCAGATCATAGGCCCGCCCGGCCCGCGCTGTATCGGTCCGTCCCGG
CTCGCTGCGCCATTGGGCAAGGGCGAGCGTCTGCTCCGTCGGCAGCGGAGGCGCAATTTCGCTTACAGCCGGCACGGCAG
GAACAGGCGGACAGGTCTCGGCGCTAGACCAGGGCCGCTCGATCCAGAAGCCCTCGAGCCGGGCCTGCCCGGCCGCTTCC
CCCGCTTTGGGTTCGGCCCGCTCATTGCCCTCGTCGCTCGTCCCGCCCCCGGCCGTATCCGGGGCAAGCCCCCAGTCGGC
CAGCGACCAGCGGGCGGGCGCGACATGAACGCGCAGGGTCTGCTGCGCGGCGTCATAGCGCCAGCGCACGGGCGCGGCGC
TGTCGGCAGCGGCAGGCCCGGCGCAGCCGAAGGGCAGGACGAGCTCGAACCGCTTGCCCTGCAGGCCGGTCGGCAGCGCC
TGCCCCGACGTGGCCGCATCGGCCGCCTTGGCGGCAAGCGCGACGAGGTCCGCGCGGCCGAGGATATGCGGCGGTTCAGG
CTGAGTCGCCGGCGGCGGCGGCGCGGGCTGGAGCGCGGGCGGCGGCGCGCTGTCCGGCCTCGGCGACGTGCTGCGCCCCA
GCAGGAATCCCCCGCCCGCCAGCGCGAGCGCGGCCACGAGGCCGCCGGCAATGGCAAGACGGCTGGTCCTGAGATTGGGC
TCGCGCATGTCCGGGTGATACCAAATTGCAAGGCCGGCTCCACCCCGCCCGTCCTGTTTCTTTTGACCGGGCGTTGA

Upstream 100 bases:

>100_bases
AGGGGGTCTGCGGATCCTTGGCGACGCGGCCGGTGAGATTGACTTCGTTCATGATGAGCCTCCTTGGGTTGCCGGCGTAC
CTTCCCGCCGGTGACACCGA

Downstream 100 bases:

>100_bases
CAGGGGCGGACCTGGGTTCGAGGCAGGGACGCGATGACGATCGATCAAATTCTCACCTTGCTCGTGCTGGTCGGCGTGGT
CGGCGTGATGATCTGGGACC

Product: LigA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MAAWGRDLHRRAQRGRGTPERRWRGPPRSGNTGAWNGVAGPGPLAAGVTSTARKGRWQPWPAVNGQSSGRPPGSAPRQWP
RHPARRRGSCAGRPAPTRAQGERPMARRRGHLGYDAAPGARQPCARRAARARRCYRFGPEQRISARAPSGLDEGLRPGAE
HSPVGGVLDAHLVERDGEEAHRPLVRPGGLGAAQAAAIRKAGNPADEPDTEPLRPGRCVRRQPLDQIIGPPGPRCIGPSR
LAAPLGKGERLLRRQRRRNFAYSRHGRNRRTGLGARPGPLDPEALEPGLPGRFPRFGFGPLIALVARPAPGRIRGKPPVG
QRPAGGRDMNAQGLLRGVIAPAHGRGAVGSGRPGAAEGQDELEPLALQAGRQRLPRRGRIGRLGGKRDEVRAAEDMRRFR
LSRRRRRRGLERGRRRAVRPRRRAAPQQESPARQRERGHEAAGNGKTAGPEIGLAHVRVIPNCKAGSTPPVLFLLTGR

Sequences:

>Translated_478_residues
MAAWGRDLHRRAQRGRGTPERRWRGPPRSGNTGAWNGVAGPGPLAAGVTSTARKGRWQPWPAVNGQSSGRPPGSAPRQWP
RHPARRRGSCAGRPAPTRAQGERPMARRRGHLGYDAAPGARQPCARRAARARRCYRFGPEQRISARAPSGLDEGLRPGAE
HSPVGGVLDAHLVERDGEEAHRPLVRPGGLGAAQAAAIRKAGNPADEPDTEPLRPGRCVRRQPLDQIIGPPGPRCIGPSR
LAAPLGKGERLLRRQRRRNFAYSRHGRNRRTGLGARPGPLDPEALEPGLPGRFPRFGFGPLIALVARPAPGRIRGKPPVG
QRPAGGRDMNAQGLLRGVIAPAHGRGAVGSGRPGAAEGQDELEPLALQAGRQRLPRRGRIGRLGGKRDEVRAAEDMRRFR
LSRRRRRRGLERGRRRAVRPRRRAAPQQESPARQRERGHEAAGNGKTAGPEIGLAHVRVIPNCKAGSTPPVLFLLTGR
>Mature_477_residues
AAWGRDLHRRAQRGRGTPERRWRGPPRSGNTGAWNGVAGPGPLAAGVTSTARKGRWQPWPAVNGQSSGRPPGSAPRQWPR
HPARRRGSCAGRPAPTRAQGERPMARRRGHLGYDAAPGARQPCARRAARARRCYRFGPEQRISARAPSGLDEGLRPGAEH
SPVGGVLDAHLVERDGEEAHRPLVRPGGLGAAQAAAIRKAGNPADEPDTEPLRPGRCVRRQPLDQIIGPPGPRCIGPSRL
AAPLGKGERLLRRQRRRNFAYSRHGRNRRTGLGARPGPLDPEALEPGLPGRFPRFGFGPLIALVARPAPGRIRGKPPVGQ
RPAGGRDMNAQGLLRGVIAPAHGRGAVGSGRPGAAEGQDELEPLALQAGRQRLPRRGRIGRLGGKRDEVRAAEDMRRFRL
SRRRRRRGLERGRRRAVRPRRRAAPQQESPARQRERGHEAAGNGKTAGPEIGLAHVRVIPNCKAGSTPPVLFLLTGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51725; Mature: 51594

Theoretical pI: Translated: 12.52; Mature: 12.52

Prosite motif: PS00059 ADH_ZINC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
AAWGRDLHRRAQRGRGTPERRWRGPPRSGNTGAWNGVAGPGPLAAGVTSTARKGRWQPW
CCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PAVNGQSSGRPPGSAPRQWPRHPARRRGSCAGRPAPTRAQGERPMARRRGHLGYDAAPGA
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
RQPCARRAARARRCYRFGPEQRISARAPSGLDEGLRPGAEHSPVGGVLDAHLVERDGEEA
CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCHHH
HRPLVRPGGLGAAQAAAIRKAGNPADEPDTEPLRPGRCVRRQPLDQIIGPPGPRCIGPSR
HCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCHHH
LAAPLGKGERLLRRQRRRNFAYSRHGRNRRTGLGARPGPLDPEALEPGLPGRFPRFGFGP
HHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHH
LIALVARPAPGRIRGKPPVGQRPAGGRDMNAQGLLRGVIAPAHGRGAVGSGRPGAAEGQD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
ELEPLALQAGRQRLPRRGRIGRLGGKRDEVRAAEDMRRFRLSRRRRRRGLERGRRRAVRP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RRRAAPQQESPARQRERGHEAAGNGKTAGPEIGLAHVRVIPNCKAGSTPPVLFLLTGR
HHHCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA