Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550668
Identifier: 148550668
GI number: 148550668
Start: 123734
End: 124186
Strand: Direct
Name: 148550668
Synonym: Swit_5231
Alternate gene names: NA
Gene position: 123734-124186 (Clockwise)
Preceding gene: 148550667
Following gene: 148550671
Centisome position: 39.88
GC content: 54.08
Gene sequence:
>453_bases ATGCTAGGGAAGCGGTCAGCTTCTCGCTATTCGCTATTGACGGTTTGCGCTGAAAAATGGGGGAGAGAGAATATGGCTTC GCCTGGCGAGACTGTGACGGCATTCCTTGCGCAATGCGGGAACGGCAAAAACGAGATGATGGATGCCTTTCGCACGTACT TCACGGCTGACACGATCTGGGAACTGGTCGGATCGATAACGACCAAGGGTATCGACGAAGCGCTGGCCAAAGTTCAATCG GCTCAGACCGAATACGGGATGGATCATCTTGTTTCGGAAGTCCGCGCTCTTGCTACGCAAGGCCAATCAGTTCTGACGGA GAGGATCGATCATGTCCGCAAGGCGGATGGAACAAACATCGATTCCTGCCCCTGTATGGGCATTTTTGAGGTCGAAGCCG GGAAGATCACCGCGTGGCGAGAATATTACGATACGGCAACGCACGGCACGTGA
Upstream 100 bases:
>100_bases ACACCTGCATCAGCGGACTCCAATGACCGGCCGTGATGGCCGGCCTGGGCTAATCCAGGGTCTGCTGTAATCGTTTAACC TGGGGATTGCTCACCCCCTC
Downstream 100 bases:
>100_bases TTGACCATTGTCAGATCGGCCCACAAGGTCGGTTCACGCCGCAGCGGGCGGCTTCCTCGTCATGTCCGGATTTCGGATAT CTGTAGGAAAAGCCGACGGA
Product: limonene-1,2-epoxide hydrolase
Products: NA
Alternate protein names: Limonene-1 2-Epoxide Hydrolase
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLGKRSASRYSLLTVCAEKWGRENMASPGETVTAFLAQCGNGKNEMMDAFRTYFTADTIWELVGSITTKGIDEALAKVQS AQTEYGMDHLVSEVRALATQGQSVLTERIDHVRKADGTNIDSCPCMGIFEVEAGKITAWREYYDTATHGT
Sequences:
>Translated_150_residues MLGKRSASRYSLLTVCAEKWGRENMASPGETVTAFLAQCGNGKNEMMDAFRTYFTADTIWELVGSITTKGIDEALAKVQS AQTEYGMDHLVSEVRALATQGQSVLTERIDHVRKADGTNIDSCPCMGIFEVEAGKITAWREYYDTATHGT >Mature_150_residues MLGKRSASRYSLLTVCAEKWGRENMASPGETVTAFLAQCGNGKNEMMDAFRTYFTADTIWELVGSITTKGIDEALAKVQS AQTEYGMDHLVSEVRALATQGQSVLTERIDHVRKADGTNIDSCPCMGIFEVEAGKITAWREYYDTATHGT
Specific function: Unknown
COG id: COG4308
COG function: function code Q; Limonene-1,2-epoxide hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16484; Mature: 16484
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGKRSASRYSLLTVCAEKWGRENMASPGETVTAFLAQCGNGKNEMMDAFRTYFTADTIW CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELVGSITTKGIDEALAKVQSAQTEYGMDHLVSEVRALATQGQSVLTERIDHVRKADGTNI HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC DSCPCMGIFEVEAGKITAWREYYDTATHGT CCCCCCCEEEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MLGKRSASRYSLLTVCAEKWGRENMASPGETVTAFLAQCGNGKNEMMDAFRTYFTADTIW CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELVGSITTKGIDEALAKVQSAQTEYGMDHLVSEVRALATQGQSVLTERIDHVRKADGTNI HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC DSCPCMGIFEVEAGKITAWREYYDTATHGT CCCCCCCEEEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA