Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550616

Identifier: 148550616

GI number: 148550616

Start: 70160

End: 71098

Strand: Reverse

Name: 148550616

Synonym: Swit_5177

Alternate gene names: NA

Gene position: 71098-70160 (Counterclockwise)

Preceding gene: 148550617

Following gene: 148550615

Centisome position: 22.92

GC content: 65.28

Gene sequence:

>939_bases
ATGTCGACCTATCATGTCGCCTTCACGGCGCGTGTCCCTCACTGGATTCTCGAGCACGCCGAGGCCGGGAACACGGACCG
TGCGCGCAGCTGGATCCTCTTGCAAGGCTGGTATGAGCGCCGCAGGCTCGAATGGAACGCCACGCTTACGGTGGAACCGG
ACAAGGCCCACTCCCCGATACGCCATGAGGTCATTCTCGATCTCGATTGTCCCGAAACCGACAGGCCCAGCGCCGCCTCG
TTCGCGTTCACCGTCAAGGTAGGCGTTCGCCATGGCGAGGATCCGATCCACAAAGCGCGCCGCGTGCTCGATCTGTCCCG
CCGCCGTGACTCGCTGTGCCGCAAGGCCGACCGCTGGGACGTTCTGGACCGCGGCTCGTTTCGCGCCGTGCGCGGCAGTT
CGCTGATTGGACCGATGCCGCCGCAGTGGCCCATCGACCGGACGCTGACCGCCTTTTCGAGCCATCTGGGGAGCTATGGA
CAAGGCGGGGTCGGCCTCGCGGGCTGGCAATGCAACGGGGGATCATGGATGGTGCTGCCGCTGACCTACTCCGACGGATG
GATCTGGCTCACGCGCGAGGAGATACGGCCAGCGCCGGACCATCGGTCACTTGCGATCGCTGTCGATCAGCGAATCCTCG
GTGTGCATCCCGATCAGCTCGCGGACTTCCCGCCCTGGGAGCATCGCTATGCCGGTCAACATCAGATCCTCGACATGCCT
GACTTCGGAGCCGAAAGGCCCACAATCCTGCGGTTCGACGCGAGCGAGACCGGCTTCATCCTCGAGGCCGCCAACGGTCC
GACCCGCTGGCGCTTCGCCATGGGCGACGACCTACCGCGCCCTGTCTGGGGCGGTTCGCGGAAACCGCGGCTGCTGTGCG
AGGGCGAATCCGTCGCCGAGGCCTTCTGCCTCGCCCATGATTGCTATCTTGAAGTCTGA

Upstream 100 bases:

>100_bases
AAGTCCGGCCGCAATACGCCTGACCACGCACGCGCAGGCAACCGGTCCGCGCCTGCTCCCTCCTGACCCCCCAGACCGAC
CATCCCAAGGAGGATTCTCC

Downstream 100 bases:

>100_bases
CCGGGGTCACGCACGTAGCACTCGCCCACGCGCTACCGCGATCGTTGCTGTGACCGCATGCCATCGGTCGCGGCCCGCTG
ACCTACCGCTTCCGACATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSTYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPIRHEVILDLDCPETDRPSAAS
FAFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWDVLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYG
QGGVGLAGWQCNGGSWMVLPLTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMP
DFGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAEAFCLAHDCYLEV

Sequences:

>Translated_312_residues
MSTYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPIRHEVILDLDCPETDRPSAAS
FAFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWDVLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYG
QGGVGLAGWQCNGGSWMVLPLTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMP
DFGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAEAFCLAHDCYLEV
>Mature_311_residues
STYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPIRHEVILDLDCPETDRPSAASF
AFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWDVLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYGQ
GGVGLAGWQCNGGSWMVLPLTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMPD
FGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAEAFCLAHDCYLEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35360; Mature: 35229

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPI
CCEEEEEEEECCCHHHHHHHCCCCCCHHEEEEEEECCHHCCEEEECEEEEECCCCCCCCC
RHEVILDLDCPETDRPSAASFAFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWD
CEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
VLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYGQGGVGLAGWQCNGGSWMVLP
CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEE
LTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMP
EEECCCEEEEEHHHCCCCCCCCEEEEEECCCEECCCHHHHCCCCCHHHHCCCCCEEECCC
DFGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAE
CCCCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHH
AFCLAHDCYLEV
HHHHHHEEEEEC
>Mature Secondary Structure 
STYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPI
CEEEEEEEECCCHHHHHHHCCCCCCHHEEEEEEECCHHCCEEEECEEEEECCCCCCCCC
RHEVILDLDCPETDRPSAASFAFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWD
CEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
VLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYGQGGVGLAGWQCNGGSWMVLP
CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEE
LTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMP
EEECCCEEEEEHHHCCCCCCCCEEEEEECCCEECCCHHHHCCCCCHHHHCCCCCEEECCC
DFGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAE
CCCCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHH
AFCLAHDCYLEV
HHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA