Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550588

Identifier: 148550588

GI number: 148550588

Start: 41146

End: 41880

Strand: Reverse

Name: 148550588

Synonym: Swit_5149

Alternate gene names: NA

Gene position: 41880-41146 (Counterclockwise)

Preceding gene: 148550590

Following gene: 148550587

Centisome position: 13.5

GC content: 61.63

Gene sequence:

>735_bases
ATGACATTCGGCTACGCGCTGCTTGGCGCTCTGGTTCTTCTGCTTCCCGGGTTTGCGGGTTATTTCGGTCTTCGTATTGG
CGAGGCGAGTGATTTTGTGTCGCCGCGGCCCGACCGGCCCAATTCCAATCTCACCATTTTCCTGATTGTGCTGCTGGCGC
TCGCTGCGCACACCGCCGGGGCGGGAATTTTTGCCTTCAACGAAGCGATAGCGGCGTGGAAGCCGCTGATCTCGCTTCCC
TATGATCCCAATCCCTACAAGGCACTTCTGTCCGGCCAGGTCCCATCGGGGCTTTCCGCGCTCGCAATCGAACTGGAACT
GCTGTTCTGCCTGGCGCTTTCCTTTGGGACCGGCTGGGTCTGCGAGAGAATGGCGCGCGCCAAGCCGATTACGACCCGAA
CCGCGCCCTTGCGCTTCGGATGGCTCCTGCCGATCGTCGAGAAGGTCGAGGCCGGTGGCCATGTCGCGGTCGGTTATGTG
CGCACGACGAGCGGCCACAACGGTGCCTGGGTCGCCTATGAAGGCAGCATCCGGCGCCTGACGCTCGACGATGACGACGG
AATCCGCATGGTGGTGCTCGAGCAGTGCGATCGCTTCATTGTCCGGATGACGGACGACAAGATCGAGCGGGTCGACATGG
ACAGCGCGCCGATCGCCATGATGCATCTTGCCGCCGACCAGATCGCCGATTTCGCAATCGAACTGTTCGAGGTTCCCGAG
ATCGGCGCTGACTGA

Upstream 100 bases:

>100_bases
ACGCGAGGCGGCCGTCCAGCGCGATGGCGTCTATGTCATCGATCGGGCGAAGATTCGTGCTGAAAAGGCCAAGAAGCTCG
CCAAGACGGCCTGATCTCGA

Downstream 100 bases:

>100_bases
GGCGAGCGGCGGCGTTCTGCTCAAAACATGCGGCACAAGGCGCGACACATCTGTGCCGCATGGTTTTTCCCCGTTCGTCA
TCATCCGCAAAATTTGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTFGYALLGALVLLLPGFAGYFGLRIGEASDFVSPRPDRPNSNLTIFLIVLLALAAHTAGAGIFAFNEAIAAWKPLISLP
YDPNPYKALLSGQVPSGLSALAIELELLFCLALSFGTGWVCERMARAKPITTRTAPLRFGWLLPIVEKVEAGGHVAVGYV
RTTSGHNGAWVAYEGSIRRLTLDDDDGIRMVVLEQCDRFIVRMTDDKIERVDMDSAPIAMMHLAADQIADFAIELFEVPE
IGAD

Sequences:

>Translated_244_residues
MTFGYALLGALVLLLPGFAGYFGLRIGEASDFVSPRPDRPNSNLTIFLIVLLALAAHTAGAGIFAFNEAIAAWKPLISLP
YDPNPYKALLSGQVPSGLSALAIELELLFCLALSFGTGWVCERMARAKPITTRTAPLRFGWLLPIVEKVEAGGHVAVGYV
RTTSGHNGAWVAYEGSIRRLTLDDDDGIRMVVLEQCDRFIVRMTDDKIERVDMDSAPIAMMHLAADQIADFAIELFEVPE
IGAD
>Mature_243_residues
TFGYALLGALVLLLPGFAGYFGLRIGEASDFVSPRPDRPNSNLTIFLIVLLALAAHTAGAGIFAFNEAIAAWKPLISLPY
DPNPYKALLSGQVPSGLSALAIELELLFCLALSFGTGWVCERMARAKPITTRTAPLRFGWLLPIVEKVEAGGHVAVGYVR
TTSGHNGAWVAYEGSIRRLTLDDDDGIRMVVLEQCDRFIVRMTDDKIERVDMDSAPIAMMHLAADQIADFAIELFEVPEI
GAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26468; Mature: 26337

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFGYALLGALVLLLPGFAGYFGLRIGEASDFVSPRPDRPNSNLTIFLIVLLALAAHTAG
CCHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
AGIFAFNEAIAAWKPLISLPYDPNPYKALLSGQVPSGLSALAIELELLFCLALSFGTGWV
CCHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH
CERMARAKPITTRTAPLRFGWLLPIVEKVEAGGHVAVGYVRTTSGHNGAWVAYEGSIRRL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEE
TLDDDDGIRMVVLEQCDRFIVRMTDDKIERVDMDSAPIAMMHLAADQIADFAIELFEVPE
EECCCCCEEEHHHHHHHHHEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
IGAD
CCCC
>Mature Secondary Structure 
TFGYALLGALVLLLPGFAGYFGLRIGEASDFVSPRPDRPNSNLTIFLIVLLALAAHTAG
CHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
AGIFAFNEAIAAWKPLISLPYDPNPYKALLSGQVPSGLSALAIELELLFCLALSFGTGWV
CCHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH
CERMARAKPITTRTAPLRFGWLLPIVEKVEAGGHVAVGYVRTTSGHNGAWVAYEGSIRRL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEE
TLDDDDGIRMVVLEQCDRFIVRMTDDKIERVDMDSAPIAMMHLAADQIADFAIELFEVPE
EECCCCCEEEHHHHHHHHHEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
IGAD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA