Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550584

Identifier: 148550584

GI number: 148550584

Start: 38831

End: 39523

Strand: Direct

Name: 148550584

Synonym: Swit_5145

Alternate gene names: NA

Gene position: 38831-39523 (Clockwise)

Preceding gene: 148550570

Following gene: 148550585

Centisome position: 12.52

GC content: 65.37

Gene sequence:

>693_bases
ATGGCAAAACGTCTTTCGGTCGTTTCTGTGAGCGATTGGGGGATTCACAAGAGTCGTGCTTTGTGCTTGATTCGTTCCAT
GCTTCAGTTCGATCTCTTCGCGCCATCGATCCCAACCCCGGCGCCAGCACCAGTAGTTGGCCTGCCGGATATCGTGCGCA
TCATCGCGGAGCACTCGGGTCGGCCGCGCTACACCTTCATGGTGCTCGATCTCATCGCCAGGGCCGCCCGGACGAACGGG
GAGGCGGGGCCTCTGGTTCGAGAAGGCGAGGTTCTGGTGCCCATCCGCGAATGGCTGGCCGCGGCGATTGCGCCGAGCGG
CGCGCGTCACCACCAGCGCCGGGCCACCGCCGATAAGGTCCGGGCTGCGCTCGCAGCCAAAGGAGAATTGCCGGGCGATC
CGGTGGAGGCCGCGCGCCGCGTCGACGCGGAACTCAGCGAGCGCATCCGCGAAACCGGCATGACGGCGATCAGCCGGGCG
GTGTCGGAGTTGGTGAAGGCAGGACTGATCAGACGGCATTACCAGGGCTTTTTCGTGGACCATGAGAACCGCGGTGCGCA
GCGTCATGCGGTCTATACGGTCACGGATGCGGTCCGCGCCGCGCTTCAGCCGAGCATCGTGACCAGCGAAAACCGGCGGC
AGCCTTATGTACGAGGCGCACACGCTCAGCCTCGAGCGGCTGCGGCGCGGTAG

Upstream 100 bases:

>100_bases
GCCACAAAATGTCAATGATTGTGGCCACGGGGCAGATGCATCGATCAATGACGGCTGCGTCACTTTACCCTTCAGGTACC
GGTCGGGTAAAGTGACACGG

Downstream 100 bases:

>100_bases
GATCGCAGCTTCACATTTCTCGGCGACGATCGGTTCCTGCTGGTCTCTCCAAGCGCATTCAATGGGCTTGGCGTGTGCAC
GACCCAGCTCCACAACGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MAKRLSVVSVSDWGIHKSRALCLIRSMLQFDLFAPSIPTPAPAPVVGLPDIVRIIAEHSGRPRYTFMVLDLIARAARTNG
EAGPLVREGEVLVPIREWLAAAIAPSGARHHQRRATADKVRAALAAKGELPGDPVEAARRVDAELSERIRETGMTAISRA
VSELVKAGLIRRHYQGFFVDHENRGAQRHAVYTVTDAVRAALQPSIVTSENRRQPYVRGAHAQPRAAAAR

Sequences:

>Translated_230_residues
MAKRLSVVSVSDWGIHKSRALCLIRSMLQFDLFAPSIPTPAPAPVVGLPDIVRIIAEHSGRPRYTFMVLDLIARAARTNG
EAGPLVREGEVLVPIREWLAAAIAPSGARHHQRRATADKVRAALAAKGELPGDPVEAARRVDAELSERIRETGMTAISRA
VSELVKAGLIRRHYQGFFVDHENRGAQRHAVYTVTDAVRAALQPSIVTSENRRQPYVRGAHAQPRAAAAR
>Mature_229_residues
AKRLSVVSVSDWGIHKSRALCLIRSMLQFDLFAPSIPTPAPAPVVGLPDIVRIIAEHSGRPRYTFMVLDLIARAARTNGE
AGPLVREGEVLVPIREWLAAAIAPSGARHHQRRATADKVRAALAAKGELPGDPVEAARRVDAELSERIRETGMTAISRAV
SELVKAGLIRRHYQGFFVDHENRGAQRHAVYTVTDAVRAALQPSIVTSENRRQPYVRGAHAQPRAAAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25103; Mature: 24972

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRLSVVSVSDWGIHKSRALCLIRSMLQFDLFAPSIPTPAPAPVVGLPDIVRIIAEHSG
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC
RPRYTFMVLDLIARAARTNGEAGPLVREGEVLVPIREWLAAAIAPSGARHHQRRATADKV
CCCHHHHHHHHHHHHHHCCCCCCCEEECCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH
RAALAAKGELPGDPVEAARRVDAELSERIRETGMTAISRAVSELVKAGLIRRHYQGFFVD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
HENRGAQRHAVYTVTDAVRAALQPSIVTSENRRQPYVRGAHAQPRAAAAR
CCCCCCCHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKRLSVVSVSDWGIHKSRALCLIRSMLQFDLFAPSIPTPAPAPVVGLPDIVRIIAEHSG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC
RPRYTFMVLDLIARAARTNGEAGPLVREGEVLVPIREWLAAAIAPSGARHHQRRATADKV
CCCHHHHHHHHHHHHHHCCCCCCCEEECCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH
RAALAAKGELPGDPVEAARRVDAELSERIRETGMTAISRAVSELVKAGLIRRHYQGFFVD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
HENRGAQRHAVYTVTDAVRAALQPSIVTSENRRQPYVRGAHAQPRAAAAR
CCCCCCCHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA