Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550585
Identifier: 148550585
GI number: 148550585
Start: 39596
End: 39904
Strand: Direct
Name: 148550585
Synonym: Swit_5146
Alternate gene names: NA
Gene position: 39596-39904 (Clockwise)
Preceding gene: 148550584
Following gene: 148550589
Centisome position: 12.76
GC content: 63.11
Gene sequence:
>309_bases GTGTGCACGACCCAGCTCCACAACGAGCCCGTGGTCTATAATCGCAAACGCCATGGCCGGTTCAAACTGGATGGCCGGAT GTACGATTTCCGGATGCGGCCGTCGGTGCCCAGGCGGCTGTCCAAGGAAGTCCTGCTTGTCGACCTCCTCCATAACATCG ACAGGCTGCCCGAGGACAAGGTGGCCATCCTGCCGCGTGCGCTTGCCAAGGCAGGGGAGATGAATAGCGCGCAGCTCGCG CGTGCGGTGAAGGAATACGGTTCGGCTCGTGCCGAACGGCTCCTCGCGCCCGTGCTGCGACCGTCTTAA
Upstream 100 bases:
>100_bases TCAGCCTCGAGCGGCTGCGGCGCGGTAGGATCGCAGCTTCACATTTCTCGGCGACGATCGGTTCCTGCTGGTCTCTCCAA GCGCATTCAATGGGCTTGGC
Downstream 100 bases:
>100_bases TCGGAAAGTGAAGCCCCTAAAATTCGGTGCGTAATCGCCTGCGCCTCTGCGACCAGATGGCTGTTCTTTTCCCTGTACAG CAGCTGGCCAATCACCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MCTTQLHNEPVVYNRKRHGRFKLDGRMYDFRMRPSVPRRLSKEVLLVDLLHNIDRLPEDKVAILPRALAKAGEMNSAQLA RAVKEYGSARAERLLAPVLRPS
Sequences:
>Translated_102_residues MCTTQLHNEPVVYNRKRHGRFKLDGRMYDFRMRPSVPRRLSKEVLLVDLLHNIDRLPEDKVAILPRALAKAGEMNSAQLA RAVKEYGSARAERLLAPVLRPS >Mature_102_residues MCTTQLHNEPVVYNRKRHGRFKLDGRMYDFRMRPSVPRRLSKEVLLVDLLHNIDRLPEDKVAILPRALAKAGEMNSAQLA RAVKEYGSARAERLLAPVLRPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11720; Mature: 11720
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTTQLHNEPVVYNRKRHGRFKLDGRMYDFRMRPSVPRRLSKEVLLVDLLHNIDRLPEDK CCCCCCCCCCCEECCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCH VAILPRALAKAGEMNSAQLARAVKEYGSARAERLLAPVLRPS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MCTTQLHNEPVVYNRKRHGRFKLDGRMYDFRMRPSVPRRLSKEVLLVDLLHNIDRLPEDK CCCCCCCCCCCEECCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCH VAILPRALAKAGEMNSAQLARAVKEYGSARAERLLAPVLRPS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA