| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is murE
Identifier: 148379429
GI number: 148379429
Start: 1590297
End: 1591748
Strand: Direct
Name: murE
Synonym: CBO1457
Alternate gene names: 148379429
Gene position: 1590297-1591748 (Clockwise)
Preceding gene: 148379428
Following gene: 148379430
Centisome position: 40.91
GC content: 27.69
Gene sequence:
>1452_bases ATGAATTTAAATTTAATACTAAAGTCATTAGAATATTCTTTTATAAAAGAAAATAAAAAGGAAATAGAAAAGATAGAATA TGATTCAAGAAAAGTTAAAGAAGGAGATTTATTTGTTTGTATAGAGGGATATGCAACAGATGGGCATAAATATGCGAAAA AAGCTTATGACAATGGAGCTAAAGTAATTGTTTGTGAGAAGGATTTAGAAGACTTATCCTATTATAAAGATTGTACTATA ATAAAAGTTTCAGATAGTAGAAAAGCCTTAGCTATAATGTCATCTAATTATTATGGTAACCCATCTAAACATATTAAAAT AATAGGTATTACAGGAACAAATGGCAAAACTACATCTACTTTTATGATGAAAGCTATACTAGAAAAAGCAGGCTATAAAG TTGGGCTTTTGGGAACTATAGCAAATTATATAGGAAATAAAAAAATAGAATCTCATAGAACTACTCCAGAGTCTCTAGAA CTACAAAAATTATTTAAAGATATGGTGGATGAAAAAGTAGATTATTGTGTAATGGAAGTATCTTCTCATTCTTTATATTT AGATAGAGTTTATGGAGTAGAATTTAAAGAGGCTATATTTACAAATTTAACGCAGGATCATTTGGACTTCCATAAAACCT TTGAAAATTATTTTAATTCCAAACTAATTTTATTTAAAAATGCTCAAAATTCAGTGATAAATATAGATGATAGTTATGGA GAAAAAGTATTAAAGAAAGCTTTAGGAAATAAAATAACCTATGGTGTAGAGAAAAATTGTGATTTAAAAGCGGAAAATTT ACATATGCATTCTAGAGGAGTAGAATTTGACACTATATTTAAAAATGAAAAAGAAACTATAGCTTTAAATATACCAGGTA AATATAATATATATAATGCTTTAGGAAGTATTGGAGCTTGTCTTTTGGAGGGTATCCCTTTAAAAACTATAAAAGAAGCA TTAGAAGATATGCCATCTGTACCAGGAAGATGTGAAATTGTAACTAAAAATTATAATTTAGGTTATGATGTTATAGTAGA TTATGCCCATACTCCAGATGGATTAGAAAATATATTAAATACTGCTCGAGAATTTACAAAGGGAAGATTAATAAGTGTAT ACGGATGCGGTGGAGATAGAGATAGAACTAAAAGACCAATTATGGGAAAAGTGGGGTCAAATTTAAGTGATATAGCTATA ATAACCTCAGATAATCCAAGAACAGAGGATCCTAAACTTATAATAAAAGATGTATTAGAAGGTATAGAAAGAGATAACTA TATAGTAGTTGAAGGAAGACGAGATGCCATAAGAAAAGCTATGGAAATAGCAAAAGAAAATGATGTTATAGTAGTGGCAG GAAAAGGCCATGAAGATTATCAAATATTAAAGGATAAAACTATTCACTTTGATGAAAGAGAAGTAATAGAAGAACTAATA AAAGAAATATAA
Upstream 100 bases:
>100_bases GATATATAAATAAAAAATAAAGTTTTTTATTTACAAAAATTAAATATGGTTTTATTGTTATTATATTAAGTGACAATAAT TAAGATAAGGAAGTGTTACA
Downstream 100 bases:
>100_bases TTACTCTAAAAATGGGAGTGTTAACATGGAAAATATTAAACTAGAAGAAATAATAAAAGCAGTTAATGGTGAGTTAGTGA TAACTGGAGAAAAAGATGAA
Product: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
Products: NA
Alternate protein names: Meso-A2pm-adding enzyme; Meso-diaminopimelate-adding enzyme; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MNLNLILKSLEYSFIKENKKEIEKIEYDSRKVKEGDLFVCIEGYATDGHKYAKKAYDNGAKVIVCEKDLEDLSYYKDCTI IKVSDSRKALAIMSSNYYGNPSKHIKIIGITGTNGKTTSTFMMKAILEKAGYKVGLLGTIANYIGNKKIESHRTTPESLE LQKLFKDMVDEKVDYCVMEVSSHSLYLDRVYGVEFKEAIFTNLTQDHLDFHKTFENYFNSKLILFKNAQNSVINIDDSYG EKVLKKALGNKITYGVEKNCDLKAENLHMHSRGVEFDTIFKNEKETIALNIPGKYNIYNALGSIGACLLEGIPLKTIKEA LEDMPSVPGRCEIVTKNYNLGYDVIVDYAHTPDGLENILNTAREFTKGRLISVYGCGGDRDRTKRPIMGKVGSNLSDIAI ITSDNPRTEDPKLIIKDVLEGIERDNYIVVEGRRDAIRKAMEIAKENDVIVVAGKGHEDYQILKDKTIHFDEREVIEELI KEI
Sequences:
>Translated_483_residues MNLNLILKSLEYSFIKENKKEIEKIEYDSRKVKEGDLFVCIEGYATDGHKYAKKAYDNGAKVIVCEKDLEDLSYYKDCTI IKVSDSRKALAIMSSNYYGNPSKHIKIIGITGTNGKTTSTFMMKAILEKAGYKVGLLGTIANYIGNKKIESHRTTPESLE LQKLFKDMVDEKVDYCVMEVSSHSLYLDRVYGVEFKEAIFTNLTQDHLDFHKTFENYFNSKLILFKNAQNSVINIDDSYG EKVLKKALGNKITYGVEKNCDLKAENLHMHSRGVEFDTIFKNEKETIALNIPGKYNIYNALGSIGACLLEGIPLKTIKEA LEDMPSVPGRCEIVTKNYNLGYDVIVDYAHTPDGLENILNTAREFTKGRLISVYGCGGDRDRTKRPIMGKVGSNLSDIAI ITSDNPRTEDPKLIIKDVLEGIERDNYIVVEGRRDAIRKAMEIAKENDVIVVAGKGHEDYQILKDKTIHFDEREVIEELI KEI >Mature_483_residues MNLNLILKSLEYSFIKENKKEIEKIEYDSRKVKEGDLFVCIEGYATDGHKYAKKAYDNGAKVIVCEKDLEDLSYYKDCTI IKVSDSRKALAIMSSNYYGNPSKHIKIIGITGTNGKTTSTFMMKAILEKAGYKVGLLGTIANYIGNKKIESHRTTPESLE LQKLFKDMVDEKVDYCVMEVSSHSLYLDRVYGVEFKEAIFTNLTQDHLDFHKTFENYFNSKLILFKNAQNSVINIDDSYG EKVLKKALGNKITYGVEKNCDLKAENLHMHSRGVEFDTIFKNEKETIALNIPGKYNIYNALGSIGACLLEGIPLKTIKEA LEDMPSVPGRCEIVTKNYNLGYDVIVDYAHTPDGLENILNTAREFTKGRLISVYGCGGDRDRTKRPIMGKVGSNLSDIAI ITSDNPRTEDPKLIIKDVLEGIERDNYIVVEGRRDAIRKAMEIAKENDVIVVAGKGHEDYQILKDKTIHFDEREVIEELI KEI
Specific function: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family. MurE subfamily
Homologues:
Organism=Escherichia coli, GI1786273, Length=493, Percent_Identity=34.4827586206897, Blast_Score=283, Evalue=1e-77, Organism=Escherichia coli, GI1786274, Length=316, Percent_Identity=25.3164556962025, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURE_CLOB1 (A7FTY1)
Other databases:
- EMBL: CP000726 - RefSeq: YP_001383808.1 - ProteinModelPortal: A7FTY1 - SMR: A7FTY1 - STRING: A7FTY1 - GeneID: 5396221 - GenomeReviews: CP000726_GR - KEGG: cba:CLB_1482 - eggNOG: COG0769 - HOGENOM: HBG602753 - OMA: IGTIANY - ProtClustDB: PRK00139 - BioCyc: CBOT441770:CLB_1482-MONOMER - GO: GO:0005737 - HAMAP: MF_00208 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005761 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - TIGRFAMs: TIGR01085
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.13
Molecular weight: Translated: 54678; Mature: 54678
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: BINDING 29-29 BINDING 181-181 BINDING 189-189 BINDING 380-380 BINDING 454-454 BINDING 458-458
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNLILKSLEYSFIKENKKEIEKIEYDSRKVKEGDLFVCIEGYATDGHKYAKKAYDNGA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCC KVIVCEKDLEDLSYYKDCTIIKVSDSRKALAIMSSNYYGNPSKHIKIIGITGTNGKTTST EEEEECCCHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHH FMMKAILEKAGYKVGLLGTIANYIGNKKIESHRTTPESLELQKLFKDMVDEKVDYCVMEV HHHHHHHHHCCCEEEHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEE SSHSLYLDRVYGVEFKEAIFTNLTQDHLDFHKTFENYFNSKLILFKNAQNSVINIDDSYG CCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHH EKVLKKALGNKITYGVEKNCDLKAENLHMHSRGVEFDTIFKNEKETIALNIPGKYNIYNA HHHHHHHHCCCEEECCCCCCCCCHHCEEECCCCCEEHHEECCCCCEEEEECCCCCHHHHH LGSIGACLLEGIPLKTIKEALEDMPSVPGRCEIVTKNYNLGYDVIVDYAHTPDGLENILN HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHH TAREFTKGRLISVYGCGGDRDRTKRPIMGKVGSNLSDIAIITSDNPRTEDPKLIIKDVLE HHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH GIERDNYIVVEGRRDAIRKAMEIAKENDVIVVAGKGHEDYQILKDKTIHFDEREVIEELI HCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHH KEI HHC >Mature Secondary Structure MNLNLILKSLEYSFIKENKKEIEKIEYDSRKVKEGDLFVCIEGYATDGHKYAKKAYDNGA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCC KVIVCEKDLEDLSYYKDCTIIKVSDSRKALAIMSSNYYGNPSKHIKIIGITGTNGKTTST EEEEECCCHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHH FMMKAILEKAGYKVGLLGTIANYIGNKKIESHRTTPESLELQKLFKDMVDEKVDYCVMEV HHHHHHHHHCCCEEEHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEE SSHSLYLDRVYGVEFKEAIFTNLTQDHLDFHKTFENYFNSKLILFKNAQNSVINIDDSYG CCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHH EKVLKKALGNKITYGVEKNCDLKAENLHMHSRGVEFDTIFKNEKETIALNIPGKYNIYNA HHHHHHHHCCCEEECCCCCCCCCHHCEEECCCCCEEHHEECCCCCEEEEECCCCCHHHHH LGSIGACLLEGIPLKTIKEALEDMPSVPGRCEIVTKNYNLGYDVIVDYAHTPDGLENILN HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHH TAREFTKGRLISVYGCGGDRDRTKRPIMGKVGSNLSDIAIITSDNPRTEDPKLIIKDVLE HHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH GIERDNYIVVEGRRDAIRKAMEIAKENDVIVVAGKGHEDYQILKDKTIHFDEREVIEELI HCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHH KEI HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA