Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is folD
Identifier: 148379158
GI number: 148379158
Start: 1287187
End: 1288035
Strand: Direct
Name: folD
Synonym: CBO1172
Alternate gene names: 148379158
Gene position: 1287187-1288035 (Clockwise)
Preceding gene: 148379157
Following gene: 148379159
Centisome position: 33.12
GC content: 26.97
Gene sequence:
>849_bases ATGGCTAAAATATTATATGGAAATGAAGTAGCTTTAAAAATAAAGGAAGATTTAAATTTAAGAATAGATAAATTAAAAGA AAAAAATATAATACCTAAGTTAGCAATTTTACGTATGGGAAATAAACCAGACGATATAGCCTATGAAAGAAGTATAATAA AAAGCTGTGAAAAACTAAACATAGAAACTAAGGTAGAAGAATTAAATGAAGATATATTAGAAGAAGATTTCTTGAAGTTA ATGGAAAGTTTAAATAACGAAAAGGAAATTCATGGTATATTAGTCTTTAGACCTTACCCTAAACATTTAAATGAAAATAT AATAAACTCTTCTATAGCATTAAATAAAGATGTGGATTGCATGCATCCTTTAAATTTAGAAAGGATATTTGAAGGAGATT TAAATGGATTTATGCCTTGTACTCCGGAGGCTGTAATAGAAATATTAAAATATTATGATATAGATTTAAAAGGAAAGAAT ATAGTTATTATAAACAGAAGTATGGTAGTGGGCAAACCATTGAGTATGATGGTCTTATCTCATAATGCTACAGTTACTAT ATGTCATTCAAGAACTATAGATTTGCCATCTATAACTAAAAAAGCAGATATAGTAGTGACAGCTATAGGAAAAGCTAAAT TAATAAAAGAAGAATATTTTAATGAAGATTCTATAGTTATGGATGTAAGCATTAATATAGATGAAAATGGAAAACTATGT GGAGATGTGGATTTTGAAAATGTAAAAGAAAAAGTAGGAGCTATAACTCCAGTTCCAAAAGGAGTAGGAAGTGTTACAAC TACCTTGTTATTAAAACACATAGTAGATGCAGCAGAAAGAAATAGTTAA
Upstream 100 bases:
>100_bases ATTCTTTGGAAGAAGAAATCAACACCTTAGTTTCTAAATATTCAACTAAGGCAGATAAAGTTTATAGTTATGTAGAAAAT TTAATAAGGGGAAATGAATA
Downstream 100 bases:
>100_bases ATATAAAAATTAAAAATTAAAGCCTGTATCCTATGTTAGTTTATATAGGATACAGGCTTATTTTTCTTATAGTAAATAAT ATATAAGATTTTATAGATTC
Product: methylenetetrahydrofolate dehydrogenase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAKILYGNEVALKIKEDLNLRIDKLKEKNIIPKLAILRMGNKPDDIAYERSIIKSCEKLNIETKVEELNEDILEEDFLKL MESLNNEKEIHGILVFRPYPKHLNENIINSSIALNKDVDCMHPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKN IVIINRSMVVGKPLSMMVLSHNATVTICHSRTIDLPSITKKADIVVTAIGKAKLIKEEYFNEDSIVMDVSINIDENGKLC GDVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAAERNS
Sequences:
>Translated_282_residues MAKILYGNEVALKIKEDLNLRIDKLKEKNIIPKLAILRMGNKPDDIAYERSIIKSCEKLNIETKVEELNEDILEEDFLKL MESLNNEKEIHGILVFRPYPKHLNENIINSSIALNKDVDCMHPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKN IVIINRSMVVGKPLSMMVLSHNATVTICHSRTIDLPSITKKADIVVTAIGKAKLIKEEYFNEDSIVMDVSINIDENGKLC GDVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAAERNS >Mature_281_residues AKILYGNEVALKIKEDLNLRIDKLKEKNIIPKLAILRMGNKPDDIAYERSIIKSCEKLNIETKVEELNEDILEEDFLKLM ESLNNEKEIHGILVFRPYPKHLNENIINSSIALNKDVDCMHPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKNI VIINRSMVVGKPLSMMVLSHNATVTICHSRTIDLPSITKKADIVVTAIGKAKLIKEEYFNEDSIVMDVSINIDENGKLCG DVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAAERNS
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=293, Percent_Identity=36.518771331058, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=36.271186440678, Blast_Score=162, Evalue=2e-40, Organism=Homo sapiens, GI94721354, Length=295, Percent_Identity=34.2372881355932, Blast_Score=145, Evalue=3e-35, Organism=Escherichia coli, GI1786741, Length=277, Percent_Identity=34.2960288808664, Blast_Score=172, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17568735, Length=291, Percent_Identity=32.9896907216495, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=37.9790940766551, Blast_Score=204, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6321643, Length=269, Percent_Identity=37.546468401487, Blast_Score=171, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322933, Length=288, Percent_Identity=21.5277777777778, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI62472483, Length=289, Percent_Identity=34.2560553633218, Blast_Score=183, Evalue=1e-46, Organism=Drosophila melanogaster, GI45551871, Length=289, Percent_Identity=34.2560553633218, Blast_Score=183, Evalue=1e-46, Organism=Drosophila melanogaster, GI24645718, Length=289, Percent_Identity=34.2560553633218, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI17137370, Length=289, Percent_Identity=34.2560553633218, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=32.3232323232323, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=32.3232323232323, Blast_Score=155, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_CLOB1 (A7FT56)
Other databases:
- EMBL: CP000726 - RefSeq: YP_001383533.1 - ProteinModelPortal: A7FT56 - SMR: A7FT56 - STRING: A7FT56 - GeneID: 5398001 - GenomeReviews: CP000726_GR - KEGG: cba:CLB_1203 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: GFPPCTP - ProtClustDB: CLSK941298 - BioCyc: CBOT441770:CLB_1203-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31696; Mature: 31565
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKILYGNEVALKIKEDLNLRIDKLKEKNIIPKLAILRMGNKPDDIAYERSIIKSCEKLN CCEEEECCEEEEEEECCCCCEEEHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC IETKVEELNEDILEEDFLKLMESLNNEKEIHGILVFRPYPKHLNENIINSSIALNKDVDC CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCEEECCCCCC MHPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKNIVIINRSMVVGKPLSMMVLS CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEECCCEEEEEECCEEECCCCEEEEEE HNATVTICHSRTIDLPSITKKADIVVTAIGKAKLIKEEYFNEDSIVMDVSINIDENGKLC CCCEEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEEEECCCCCEE GDVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAAERNS CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKILYGNEVALKIKEDLNLRIDKLKEKNIIPKLAILRMGNKPDDIAYERSIIKSCEKLN CEEEECCEEEEEEECCCCCEEEHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC IETKVEELNEDILEEDFLKLMESLNNEKEIHGILVFRPYPKHLNENIINSSIALNKDVDC CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCEEECCCCCC MHPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKNIVIINRSMVVGKPLSMMVLS CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEECCCEEEEEECCEEECCCCEEEEEE HNATVTICHSRTIDLPSITKKADIVVTAIGKAKLIKEEYFNEDSIVMDVSINIDENGKLC CCCEEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEEEECCCCCEE GDVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAAERNS CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA