Click here to switch to the map view.

The map label for this gene is 148359465

Identifier: 148359465

GI number: 148359465

Start: 2231136

End: 2232566

Strand: Reverse

Name: 148359465

Synonym: LPC_1372

Alternate gene names: NA

Gene position: 2232566-2231136 (Counterclockwise)

Preceding gene: 148359466

Following gene: 148359462

Centisome position: 62.42

GC content: 42.42

Gene sequence:

>1431_bases
ATGAAAATATTTAAGTTTAGCAGTTGGCTTTTGTTGTTTGTATTCACCCTGGATGCGAATGCTTATTATACCAGCCAAGG
TAGAATCTATGATAAAAGCGGGAATAGGGTGACTATCAATGGAGTGTCCTGGTCAGGATTTCAGGACACTAATGTTTTTC
AGGGATTGCAGAGCAATCCTTTTTATAATATCACCATGCCTCAATCCAAACCTCGGAATGGATTAATGGATTTATTGGTT
CACCCCTGGTCTATGGCGGATTCTGGTGTAAACAGCAGTACAGCGGTAGAGTTCAAGACCGTACGTTTGCCTATACAGCC
AGGTGTTCTTTATGATGACAGTGGGGAAGTCGATCTGAACAAATGGCTTTCTGACAAAACGCAACCTGAAGCCGGTAATG
GTCTTTTTTGCAAGACCTGGCAGTCCAATGGCCAATCGTGTGAAAAAGCAGTGAGTCCGAAGCAGGCTTTCTGGACGGTA
CTTGCTGAAATGAAGAAACATAATACCAATGTGATGATTGATTTTCACCATCGTTATGGTTATGGCGATGGAATGAGGGA
TGGCACTGTTTATAGCATGGCTCAATATGAGAAGGATTTAGTTCTGCTTGCTCAGGAAATCAAACAACGTGGTTTGGACA
ATGTCATTGGCATTGATGTTTTTAATGAACCCTATCAATTGAGCTGGTTTAAAGCCAGGAATGGTCAGGTTTCGTGGATT
ACAGTGATAGCTACTGCTGCCAAGGCAGTGCATCAGGTCAATCCTGATTTGTTACTGTTTGTTGAAGGACCTGGAGGCGG
AAATGATGATATGGATAATCCAACAATTTGTGTGCCAAAAGCCAATATTAAAGAGGATTCAGGCTATGCACACTGGCGCG
ATCCAGGGCAGTGTGGCAATGATCAGGAGGTTGTAGCATTCAAAGGGAACTGGGGGGAAGATTTTAAACCCCTTCTTGAT
AAGAATTTAGCTAAACAAAACATAGCGCAATTTGATGTACAAAAATTTAGTAATGAGCTGCAACTGGCGGTTCCAGAAAT
TGATGCAGAAACCCTCAGTTGGCTGTTGGGTGATGATAATATGGGAAATAATGGCCATCTGGTTTTCTCACCCCATGTTT
ACCCAAAAGAGGTGGCTGGTTGGGAAACAGCCCCTGGTGATGCAAGTAATCTGCGTTTCGATTGGAGTTGGGGTTTCCTG
TACAAAGCTGGGTATCCTATTGTTTTAGGGGAAGCCTCCTGGAAATCTTTTGAAGGAAAAAACTTTTTTACCCAGGCATT
GATGCCTTATCTTACCCAAAGTGGTATAGGGACCAATAACTTATATTTCTGGGCGATAGGGTATCTGGGTGATACGGTTA
GTGCTATCAATCCGAATACTGGCGAATTAAATCTCGATGTGCAACAAACATTGAAGCCCTATTTTAATTAA

Upstream 100 bases:

>100_bases
TAATGATTATACTGTTCAAATATTGTGGTTTTGTGGTTAAATAATGAGCTTTTAACCAACTTAACAATAACTTTATGGTT
ATTTTAATGAGGAAAAGCGC

Downstream 100 bases:

>100_bases
ATCCATCTCTGATAACCCAGTACTGTACTGATCTTCGACGTCCCGTGGCTTGTCCACGGGATCCAGGAGCTCTCAGCTAA
AACACTGACCCTGTGGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKIFKFSSWLLLFVFTLDANAYYTSQGRIYDKSGNRVTINGVSWSGFQDTNVFQGLQSNPFYNITMPQSKPRNGLMDLLV
HPWSMADSGVNSSTAVEFKTVRLPIQPGVLYDDSGEVDLNKWLSDKTQPEAGNGLFCKTWQSNGQSCEKAVSPKQAFWTV
LAEMKKHNTNVMIDFHHRYGYGDGMRDGTVYSMAQYEKDLVLLAQEIKQRGLDNVIGIDVFNEPYQLSWFKARNGQVSWI
TVIATAAKAVHQVNPDLLLFVEGPGGGNDDMDNPTICVPKANIKEDSGYAHWRDPGQCGNDQEVVAFKGNWGEDFKPLLD
KNLAKQNIAQFDVQKFSNELQLAVPEIDAETLSWLLGDDNMGNNGHLVFSPHVYPKEVAGWETAPGDASNLRFDWSWGFL
YKAGYPIVLGEASWKSFEGKNFFTQALMPYLTQSGIGTNNLYFWAIGYLGDTVSAINPNTGELNLDVQQTLKPYFN

Sequences:

>Translated_476_residues
MKIFKFSSWLLLFVFTLDANAYYTSQGRIYDKSGNRVTINGVSWSGFQDTNVFQGLQSNPFYNITMPQSKPRNGLMDLLV
HPWSMADSGVNSSTAVEFKTVRLPIQPGVLYDDSGEVDLNKWLSDKTQPEAGNGLFCKTWQSNGQSCEKAVSPKQAFWTV
LAEMKKHNTNVMIDFHHRYGYGDGMRDGTVYSMAQYEKDLVLLAQEIKQRGLDNVIGIDVFNEPYQLSWFKARNGQVSWI
TVIATAAKAVHQVNPDLLLFVEGPGGGNDDMDNPTICVPKANIKEDSGYAHWRDPGQCGNDQEVVAFKGNWGEDFKPLLD
KNLAKQNIAQFDVQKFSNELQLAVPEIDAETLSWLLGDDNMGNNGHLVFSPHVYPKEVAGWETAPGDASNLRFDWSWGFL
YKAGYPIVLGEASWKSFEGKNFFTQALMPYLTQSGIGTNNLYFWAIGYLGDTVSAINPNTGELNLDVQQTLKPYFN
>Mature_476_residues
MKIFKFSSWLLLFVFTLDANAYYTSQGRIYDKSGNRVTINGVSWSGFQDTNVFQGLQSNPFYNITMPQSKPRNGLMDLLV
HPWSMADSGVNSSTAVEFKTVRLPIQPGVLYDDSGEVDLNKWLSDKTQPEAGNGLFCKTWQSNGQSCEKAVSPKQAFWTV
LAEMKKHNTNVMIDFHHRYGYGDGMRDGTVYSMAQYEKDLVLLAQEIKQRGLDNVIGIDVFNEPYQLSWFKARNGQVSWI
TVIATAAKAVHQVNPDLLLFVEGPGGGNDDMDNPTICVPKANIKEDSGYAHWRDPGQCGNDQEVVAFKGNWGEDFKPLLD
KNLAKQNIAQFDVQKFSNELQLAVPEIDAETLSWLLGDDNMGNNGHLVFSPHVYPKEVAGWETAPGDASNLRFDWSWGFL
YKAGYPIVLGEASWKSFEGKNFFTQALMPYLTQSGIGTNNLYFWAIGYLGDTVSAINPNTGELNLDVQQTLKPYFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53330; Mature: 53330

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFKFSSWLLLFVFTLDANAYYTSQGRIYDKSGNRVTINGVSWSGFQDTNVFQGLQSNP
CEEEEEHHEEEEEEEEECCCEEECCCCEEEECCCCEEEEEECEECCCCCCHHHCCCCCCC
FYNITMPQSKPRNGLMDLLVHPWSMADSGVNSSTAVEFKTVRLPIQPGVLYDDSGEVDLN
EEEEECCCCCCCCCHHHHHCCCCHHCCCCCCCCEEEEEEEEEEECCCCEEECCCCCEEHH
KWLSDKTQPEAGNGLFCKTWQSNGQSCEKAVSPKQAFWTVLAEMKKHNTNVMIDFHHRYG
HHHCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEHHHCC
YGDGMRDGTVYSMAQYEKDLVLLAQEIKQRGLDNVIGIDVFNEPYQLSWFKARNGQVSWI
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCEEEE
TVIATAAKAVHQVNPDLLLFVEGPGGGNDDMDNPTICVPKANIKEDSGYAHWRDPGQCGN
EEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCC
DQEVVAFKGNWGEDFKPLLDKNLAKQNIAQFDVQKFSNELQLAVPEIDAETLSWLLGDDN
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHEEECCCC
MGNNGHLVFSPHVYPKEVAGWETAPGDASNLRFDWSWGFLYKAGYPIVLGEASWKSFEGK
CCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCC
NFFTQALMPYLTQSGIGTNNLYFWAIGYLGDTVSAINPNTGELNLDVQQTLKPYFN
CHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEEHHHHHCCCCC
>Mature Secondary Structure
MKIFKFSSWLLLFVFTLDANAYYTSQGRIYDKSGNRVTINGVSWSGFQDTNVFQGLQSNP
CEEEEEHHEEEEEEEEECCCEEECCCCEEEECCCCEEEEEECEECCCCCCHHHCCCCCCC
FYNITMPQSKPRNGLMDLLVHPWSMADSGVNSSTAVEFKTVRLPIQPGVLYDDSGEVDLN
EEEEECCCCCCCCCHHHHHCCCCHHCCCCCCCCEEEEEEEEEEECCCCEEECCCCCEEHH
KWLSDKTQPEAGNGLFCKTWQSNGQSCEKAVSPKQAFWTVLAEMKKHNTNVMIDFHHRYG
HHHCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEHHHCC
YGDGMRDGTVYSMAQYEKDLVLLAQEIKQRGLDNVIGIDVFNEPYQLSWFKARNGQVSWI
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCEEEE
TVIATAAKAVHQVNPDLLLFVEGPGGGNDDMDNPTICVPKANIKEDSGYAHWRDPGQCGN
EEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCC
DQEVVAFKGNWGEDFKPLLDKNLAKQNIAQFDVQKFSNELQLAVPEIDAETLSWLLGDDN
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHEEECCCC
MGNNGHLVFSPHVYPKEVAGWETAPGDASNLRFDWSWGFLYKAGYPIVLGEASWKSFEGK
CCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCC
NFFTQALMPYLTQSGIGTNNLYFWAIGYLGDTVSAINPNTGELNLDVQQTLKPYFN
CHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA