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The map label for this gene is ybjS [H]

Identifier: 148359165

GI number: 148359165

Start: 1868030

End: 1869010

Strand: Reverse

Name: ybjS [H]

Synonym: LPC_1058

Alternate gene names: 148359165

Gene position: 1869010-1868030 (Counterclockwise)

Preceding gene: 148359166

Following gene: 148359164

Centisome position: 52.26

GC content: 37.92

Gene sequence:

>981_bases
ATGGTTTCAGTTGTAACCGGCGCTACAGGATGTTTAGGTTTAAATCTTACAAGACGCTTGATTAAGGAAGGCCATGCTGT
CATTGCATTAGGACGCAATTTGCAGTTGGGTGAAATAATAAGCCAAATGGGAGCAACATTTGTTCCGCTCGATTTAAAGG
ATCTGGAGTCTTTGTCTTTGATAAGTCAAAATGCGGATTTCATATTTCATTGCGCGGCTTTATCAAGCCCCTGGGGAAAA
TATAAAGATTTTTATCAGGCTAATGTCATAGGGACTCACAATGTTGTTCAGGCAACTCCCAGTCAGGCTCGACTTGTTTA
TGTCTCCACTCCTAGTATTTATTTTGATTTTACCGAGAAGCACAATATTAAAGAAAATGCACTTTTACCAGCAAAACCGG
TCAATTATTATGTGCAAACCAAATTAATTGCTGAATCCATCGTAGATAAAGCTCAACTACAGCGTGGCCTGGATGTGATT
ACCATACGTCCCAGAGGAATTTTTGGACCATATGATCGCGCTATTTTCCCTCGCTTATTGAAAGCAGAGCGCCAAGGGGT
GCTTCCAATCATTGGTTCAGGTAATCATTTGATTGATATTACTTTTGTAGAAAATGTAGTGGAGAGCCTTATCCTGGCTG
CTTTGGCAGATAAATGCTATTCAGGGAAAAAATATAATATCACCAATGATGAACCTAGGACTTTTATTGATATCATTTCA
AGGATGTTTTCTGCTCTTAACAAACCATTAAAAACCAGAAGTATTCCTTATAATCAAGCAAGATTTGCCGCAAAGTTTCT
TGAGTTTTTGCATCGGGTGCTTTATCTGAAAACAGAACCAAAGATTACAGAGTATGGTGTCGGAGTGTTGGCTTTCGGAC
AAACATTAAATATTGAAGAGGCAAAAAAAGATTTAAAGTATAAGCCAATTTATAGCATTGATGAGGGTATAATGAAATTT
GCTGAATGGTATTGTTCATGA

Upstream 100 bases:

>100_bases
CATTTGATCCATAATCATAATTTAGAGCGTGGGCAGTTGGTTTATTTATTAGGTACTGGCGCTGGATTGTCAGCTGCTGG
AATGATACTGGAGTATTAGT

Downstream 100 bases:

>100_bases
ATATAGAGTATCAGTTATTTGAAGCTGGCTATTGCAAACATTGCGAACGCATGACTTTAAAAAATGGGAAAATCAGACAG
CGTGAATATCCATCTTTCTG

Product: 3-beta-hydroxysteroid dehydrogenase/isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MVSVVTGATGCLGLNLTRRLIKEGHAVIALGRNLQLGEIISQMGATFVPLDLKDLESLSLISQNADFIFHCAALSSPWGK
YKDFYQANVIGTHNVVQATPSQARLVYVSTPSIYFDFTEKHNIKENALLPAKPVNYYVQTKLIAESIVDKAQLQRGLDVI
TIRPRGIFGPYDRAIFPRLLKAERQGVLPIIGSGNHLIDITFVENVVESLILAALADKCYSGKKYNITNDEPRTFIDIIS
RMFSALNKPLKTRSIPYNQARFAAKFLEFLHRVLYLKTEPKITEYGVGVLAFGQTLNIEEAKKDLKYKPIYSIDEGIMKF
AEWYCS

Sequences:

>Translated_326_residues
MVSVVTGATGCLGLNLTRRLIKEGHAVIALGRNLQLGEIISQMGATFVPLDLKDLESLSLISQNADFIFHCAALSSPWGK
YKDFYQANVIGTHNVVQATPSQARLVYVSTPSIYFDFTEKHNIKENALLPAKPVNYYVQTKLIAESIVDKAQLQRGLDVI
TIRPRGIFGPYDRAIFPRLLKAERQGVLPIIGSGNHLIDITFVENVVESLILAALADKCYSGKKYNITNDEPRTFIDIIS
RMFSALNKPLKTRSIPYNQARFAAKFLEFLHRVLYLKTEPKITEYGVGVLAFGQTLNIEEAKKDLKYKPIYSIDEGIMKF
AEWYCS
>Mature_326_residues
MVSVVTGATGCLGLNLTRRLIKEGHAVIALGRNLQLGEIISQMGATFVPLDLKDLESLSLISQNADFIFHCAALSSPWGK
YKDFYQANVIGTHNVVQATPSQARLVYVSTPSIYFDFTEKHNIKENALLPAKPVNYYVQTKLIAESIVDKAQLQRGLDVI
TIRPRGIFGPYDRAIFPRLLKAERQGVLPIIGSGNHLIDITFVENVVESLILAALADKCYSGKKYNITNDEPRTFIDIIS
RMFSALNKPLKTRSIPYNQARFAAKFLEFLHRVLYLKTEPKITEYGVGVLAFGQTLNIEEAKKDLKYKPIYSIDEGIMKF
AEWYCS

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI193211614, Length=329, Percent_Identity=31.306990881459, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI8393516, Length=329, Percent_Identity=31.306990881459, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI116268111, Length=347, Percent_Identity=27.0893371757925, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI239745448, Length=329, Percent_Identity=27.9635258358663, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI310132178, Length=329, Percent_Identity=27.9635258358663, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI310113012, Length=329, Percent_Identity=27.9635258358663, Blast_Score=85, Evalue=8e-17,
Organism=Escherichia coli, GI87081792, Length=331, Percent_Identity=35.3474320241692, Blast_Score=204, Evalue=7e-54,
Organism=Escherichia coli, GI1788353, Length=367, Percent_Identity=20.9809264305177, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17509709, Length=280, Percent_Identity=25.3571428571429, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17570557, Length=285, Percent_Identity=25.6140350877193, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321437, Length=345, Percent_Identity=28.9855072463768, Blast_Score=112, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 36556; Mature: 36556

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVVTGATGCLGLNLTRRLIKEGHAVIALGRNLQLGEIISQMGATFVPLDLKDLESLSL
CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCEEECCCHHHHHHHHH
ISQNADFIFHCAALSSPWGKYKDFYQANVIGTHNVVQATPSQARLVYVSTPSIYFDFTEK
HHCCCCEEEEEEHHCCCCHHHHHHHHCCEECCCCCEECCCCCCEEEEEECCCEEEEECCC
HNIKENALLPAKPVNYYVQTKLIAESIVDKAQLQRGLDVITIRPRGIFGPYDRAIFPRLL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH
KAERQGVLPIIGSGNHLIDITFVENVVESLILAALADKCYSGKKYNITNDEPRTFIDIIS
HHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RMFSALNKPLKTRSIPYNQARFAAKFLEFLHRVLYLKTEPKITEYGVGVLAFGQTLNIEE
HHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHCCEEEEECCCCCHHH
AKKDLKYKPIYSIDEGIMKFAEWYCS
HHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSVVTGATGCLGLNLTRRLIKEGHAVIALGRNLQLGEIISQMGATFVPLDLKDLESLSL
CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCEEECCCHHHHHHHHH
ISQNADFIFHCAALSSPWGKYKDFYQANVIGTHNVVQATPSQARLVYVSTPSIYFDFTEK
HHCCCCEEEEEEHHCCCCHHHHHHHHCCEECCCCCEECCCCCCEEEEEECCCEEEEECCC
HNIKENALLPAKPVNYYVQTKLIAESIVDKAQLQRGLDVITIRPRGIFGPYDRAIFPRLL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH
KAERQGVLPIIGSGNHLIDITFVENVVESLILAALADKCYSGKKYNITNDEPRTFIDIIS
HHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RMFSALNKPLKTRSIPYNQARFAAKFLEFLHRVLYLKTEPKITEYGVGVLAFGQTLNIEE
HHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHCCEEEEECCCCCHHH
AKKDLKYKPIYSIDEGIMKFAEWYCS
HHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]