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The map label for this gene is ahlD [H]

Identifier: 148359164

GI number: 148359164

Start: 1867209

End: 1868033

Strand: Reverse

Name: ahlD [H]

Synonym: LPC_1056

Alternate gene names: 148359164

Gene position: 1868033-1867209 (Counterclockwise)

Preceding gene: 148359165

Following gene: 148359163

Centisome position: 52.23

GC content: 36.48

Gene sequence:

>825_bases
ATGAATATAGAGTATCAGTTATTTGAAGCTGGCTATTGCAAACATTGCGAACGCATGACTTTAAAAAATGGGAAAATCAG
ACAGCGTGAATATCCATCTTTCTGTACTCTTATAAAACACCCAAGCCACGGATATATTTTATTTGACACAGGATATTCTG
ACCGTTTTACTTGTTTAACCCAAAAATTTCCAGCCTCTATATATCGTCATTTAAACTCTATGACACTTGTAAAATCCTTA
AAAAGAACATTGCTAGAAATTCATATAAAACCAGAAGATATCAATTATATTGTGATTTCGCATTTTCATGCTGATCACAT
TGGAAGGATATGCGATTTTCCTAATGCTCATTTTATATGTCATTCTGATGCGATAGACGATATTCAGCATACAAAGGGGT
TGAAAGCGTTATTGAAAGGCTTTTTACCTGGACTGCTACCCGAAGATTTCTTTGAACGTTTATTACCACTTCAAAAAACA
ATCCAACTTGACGAACATCTTTTACCTTTTTCTGATGGTTTTGATGTATTGGGTGACAACTCATTGATTGCTATTCCTTT
ACCGGGACACGCTAAAGGGCAAATCGGCTTGTATTTTAAAGCGCCTGGCGACATTTTCCTGGTTGCGGATAGTTGCTGGC
ACCAGGAAACTTTTAAAGAACTCATTTATCCGAGCGCTTTGACCTATTTGATTCATCATGACAAGCGTGCCTATTTAAAG
ACAATTCAAAAATTGCACGAACTGTATCAGAGAAACAAGACTATTGAAATTATTCCTTCTCACTGCCAACAATTGCGCTC
GAGAATTGGGAACCCATTATGTTAG

Upstream 100 bases:

>100_bases
GACAAACATTAAATATTGAAGAGGCAAAAAAAGATTTAAAGTATAAGCCAATTTATAGCATTGATGAGGGTATAATGAAA
TTTGCTGAATGGTATTGTTC

Downstream 100 bases:

>100_bases
CACGTATTCTATTTCATTATTTTAATACACTTTATCTTAATAAAACTATTACTACCCCGGAAAAATTAAAGACTCATCAA
GCAAAACAATTTGAAAAACT

Product: Zn-dependent hydrolase GumP

Products: NA

Alternate protein names: AHL-lactonase [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCTLIKHPSHGYILFDTGYSDRFTCLTQKFPASIYRHLNSMTLVKSL
KRTLLEIHIKPEDINYIVISHFHADHIGRICDFPNAHFICHSDAIDDIQHTKGLKALLKGFLPGLLPEDFFERLLPLQKT
IQLDEHLLPFSDGFDVLGDNSLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKRAYLK
TIQKLHELYQRNKTIEIIPSHCQQLRSRIGNPLC

Sequences:

>Translated_274_residues
MNIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCTLIKHPSHGYILFDTGYSDRFTCLTQKFPASIYRHLNSMTLVKSL
KRTLLEIHIKPEDINYIVISHFHADHIGRICDFPNAHFICHSDAIDDIQHTKGLKALLKGFLPGLLPEDFFERLLPLQKT
IQLDEHLLPFSDGFDVLGDNSLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKRAYLK
TIQKLHELYQRNKTIEIIPSHCQQLRSRIGNPLC
>Mature_274_residues
MNIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCTLIKHPSHGYILFDTGYSDRFTCLTQKFPASIYRHLNSMTLVKSL
KRTLLEIHIKPEDINYIVISHFHADHIGRICDFPNAHFICHSDAIDDIQHTKGLKALLKGFLPGLLPEDFFERLLPLQKT
IQLDEHLLPFSDGFDVLGDNSLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKRAYLK
TIQKLHELYQRNKTIEIIPSHCQQLRSRIGNPLC

Specific function: Hydrolyzes the acyl homoserine lactones N-hexanoyl-L- homoserine lactone, N-3-oxohexanoyl-L-homoserine lactone, N- octonoyl-L-homoserine lactone, N-decanoyl-L-homoserine lactone and N-3-oxododecanoyl-L-homoserine lactone [H]

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: =3.1.1.81 [H]

Molecular weight: Translated: 31699; Mature: 31699

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCTLIKHPSHGYILFDTGYSDRFTCLT
CCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCHHHHH
QKFPASIYRHLNSMTLVKSLKRTLLEIHIKPEDINYIVISHFHADHIGRICDFPNAHFIC
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCHHHHHHHHCCCCCEEEE
HSDAIDDIQHTKGLKALLKGFLPGLLPEDFFERLLPLQKTIQLDEHLLPFSDGFDVLGDN
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKRAYLK
CEEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TIQKLHELYQRNKTIEIIPSHCQQLRSRIGNPLC
HHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCTLIKHPSHGYILFDTGYSDRFTCLT
CCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCHHHHH
QKFPASIYRHLNSMTLVKSLKRTLLEIHIKPEDINYIVISHFHADHIGRICDFPNAHFIC
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCHHHHHHHHCCCCCEEEE
HSDAIDDIQHTKGLKALLKGFLPGLLPEDFFERLLPLQKTIQLDEHLLPFSDGFDVLGDN
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKRAYLK
CEEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TIQKLHELYQRNKTIEIIPSHCQQLRSRIGNPLC
HHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12777494 [H]