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The map label for this gene is nudL [H]

Identifier: 148359090

GI number: 148359090

Start: 1786267

End: 1786776

Strand: Reverse

Name: nudL [H]

Synonym: LPC_0978

Alternate gene names: 148359090

Gene position: 1786776-1786267 (Counterclockwise)

Preceding gene: 148359091

Following gene: 148359089

Centisome position: 49.96

GC content: 33.53

Gene sequence:

>510_bases
ATGGAATCAAATAATACCCAACAGTCAATCAAAACACATTCATCAGTTATCGTTTTATATGATCTTTCCAAAGACTCGTT
AATTCTCACCAAGCGAAGTCAGATGCTTAATAAACACCCAGGAGAAGTGTGCTTTCCTGGTGGATTTCAAGAAATAAATG
ATCAAGATCTATATAGCACTGCATTGAGAGAACTTAATGAAGAGTTAGGTGTTACATCAGACAGAATAACTTTGATCAGA
AAATTAAACATTGAAAGGACTTTACTGGGTTTAGTCATTCACCCTTGGTACGCCAGTATTGATTCTATATTCCCTTACAC
TATGAATCCACAAGAGGTTAGTAAATTAATTCTTGTGCCTATGCCTTTAGTAAAAAATCAGAAAAATTATAAAGAAATTA
GAATTGAGAAAGAGGGAAAACACATTGTCACCTGCCAATTTATTGCTAATGAAGAATTAATATGGGGTGCTACAGCAAGA
ATTATGAGGCAATTAGCTTCTCAATATTAA

Upstream 100 bases:

>100_bases
GATAATGTTTTGTATTTGGCAGCAGGAGGGGGAATAGTTATTGACTCCGATTGGGAAGATGAATATCGTGAATGTTTAAC
CAAAATTAGTGCAATTATCA

Downstream 100 bases:

>100_bases
GTATGATACCAGGATGATAAAAGGCATTTCTTTAAATGCCTTTACCTGATTATTAAACCAAATTAAAGAAATCGTATGAT
ACAAATTGTACAAATCAAAT

Product: MutT/nudix family transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MESNNTQQSIKTHSSVIVLYDLSKDSLILTKRSQMLNKHPGEVCFPGGFQEINDQDLYSTALRELNEELGVTSDRITLIR
KLNIERTLLGLVIHPWYASIDSIFPYTMNPQEVSKLILVPMPLVKNQKNYKEIRIEKEGKHIVTCQFIANEELIWGATAR
IMRQLASQY

Sequences:

>Translated_169_residues
MESNNTQQSIKTHSSVIVLYDLSKDSLILTKRSQMLNKHPGEVCFPGGFQEINDQDLYSTALRELNEELGVTSDRITLIR
KLNIERTLLGLVIHPWYASIDSIFPYTMNPQEVSKLILVPMPLVKNQKNYKEIRIEKEGKHIVTCQFIANEELIWGATAR
IMRQLASQY
>Mature_169_residues
MESNNTQQSIKTHSSVIVLYDLSKDSLILTKRSQMLNKHPGEVCFPGGFQEINDQDLYSTALRELNEELGVTSDRITLIR
KLNIERTLLGLVIHPWYASIDSIFPYTMNPQEVSKLILVPMPLVKNQKNYKEIRIEKEGKHIVTCQFIANEELIWGATAR
IMRQLASQY

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=99, Percent_Identity=38.3838383838384, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17510677, Length=110, Percent_Identity=35.4545454545455, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 19435; Mature: 19435

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESNNTQQSIKTHSSVIVLYDLSKDSLILTKRSQMLNKHPGEVCFPGGFQEINDQDLYST
CCCCCHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHCCCCCEECCCCCCCCCCHHHHHH
ALRELNEELGVTSDRITLIRKLNIERTLLGLVIHPWYASIDSIFPYTMNPQEVSKLILVP
HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHEEEEC
MPLVKNQKNYKEIRIEKEGKHIVTCQFIANEELIWGATARIMRQLASQY
CCHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MESNNTQQSIKTHSSVIVLYDLSKDSLILTKRSQMLNKHPGEVCFPGGFQEINDQDLYST
CCCCCHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHCCCCCEECCCCCCCCCCHHHHHH
ALRELNEELGVTSDRITLIRKLNIERTLLGLVIHPWYASIDSIFPYTMNPQEVSKLILVP
HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHEEEEC
MPLVKNQKNYKEIRIEKEGKHIVTCQFIANEELIWGATARIMRQLASQY
CCHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA