Definition | Orientia tsutsugamushi Boryong, complete genome. |
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Accession | NC_009488 |
Length | 2,127,051 |
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The map label for this gene is pleC [H]
Identifier: 148284508
GI number: 148284508
Start: 883451
End: 884998
Strand: Direct
Name: pleC [H]
Synonym: OTBS_0907
Alternate gene names: 148284508
Gene position: 883451-884998 (Clockwise)
Preceding gene: 148284501
Following gene: 148284509
Centisome position: 41.53
GC content: 27.39
Gene sequence:
>1548_bases GTGTATAATAATGTACTATTTAATTACAATGGGCAATATACAAAGAAATATATGCATTATAGATATGCGATTAGATTATC ATTTATAGCTGTTTTTCTAACTTTAGTAGGCTTAACAATTTATTATAGATATAATGTGATCAAATGGTATAGCCTAATTC CTGCACAAAAAAATGCAAGGAATATTGTTTCAAAATATAGAACCAAATTTTTAAATCAAAATCATAATAAAGATATTATT TCTAAACTTGCGACCAATTCTTATGATTTAAAGTTGGATTTAGATTTAAAAAATTTAGCTAAACAATCTCTTAATTTCTT TAGGGAAATTGAGTTTATGGAGTCTATAGAACAAATAACATTATATGATAATATGAAAAATATTATCATTAGATCAAAAG ATGATTATGTTGCTACTAATAATGTTCGTAAAAATATAGGAATTGAAAGTTTGCTACTTTATCTAGATAAACTGCTTTTT TATACATACCAGAAGCCAAATCAAAAACCTACTTTTAAACATGGAGCACGAATTACAAACTGCTTTGTTGAATTTGATAA TAACACATATCCTTCTAGAGCTAATACGTCTCTATTTTCTGCTAATGTATTAATTCATTGTGAAAGCCCTATTATTTTAG ACCATGCAGTAATTGCATTTTTAAAAATTACCTATAATGCTACTCAACAATGGATGTACATAAATAATATTAGCAAACAA GTATTAACAATTCTTTTGCTAATGTCTTTAATTTTTTTCTTTATTATAAAAAGCAGTATATCTAATGTTCAGAAAATTAT TAATGTTCAATTGAATGCCAATAAATATCTTGAACAAGCAAGGCAAAAAGCAGAAAAGGAAAATATAGCTAAAAACAAAT TTTTAGCTAATGTTAGTCATGAACTACGAACACCGTTAAGTGCTATTATTGGACTTACAGAAATAATATTATCTAACTCT CATTGCAAAATAAACTACTACAACTATATTCGTGATATTCATAATTCTGGAAAGCACTTATTAGCAGTAATTAATGATAT TCTTGATTTTTCTAAGGCTTCAGCTAACAAATTAACAGTAGAAAATGTCGCAGTAGACCTTAACAAATTGGCAGCTTCAA GTTTACGCTTGATGTATACTAAGGCCAAAAAAGCTGGTATAAAACTGATTTCTAAGTTTCCACCAGATCAAATTATTATT AATGCAGATGCTAAACGTTTAAAACAAGCCTTGTTTAACTTGTTATCTAATTCAATAAAATTTACTCCTAGTAAAGGTTC TATAACACTTGAAATTAGTATGAACGAACTAAAGTCTTTAGTTTATATAAAAGTTATTGATACAGGTATTGGTATTGCGG AACAGGATATTCCTAAAGCATTATCAAGTTTTGAACAAGTAAATAATAACCTAAGTAATCAGCGTGAAGGTACAGGATTA GGCTTGCCACTAACGAAGAAGCTCATTTACTTAATGGAAGGAGATTTCGAAATAACAAGCAATATAGGACAAGGCACAAC TGTTACAATAACATTTAAATATCCTTAA
Upstream 100 bases:
>100_bases ATAGAAAGACTTAGACCATAAAATATAAATTTTAGCAAATTTAAGTATATAAAATACTTATACCATATAAATGAAATTTA AATAATACTGAAGTATTAAA
Downstream 100 bases:
>100_bases CATTTAAATATCCTTCCAGAACAATAAATTAATACTATAATGGCAAATCTATATAGTCATTTACAATGAGGTTTGAGCAT AGAAAAAAGCGACAATAGCA
Product: PleC-like histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MYNNVLFNYNGQYTKKYMHYRYAIRLSFIAVFLTLVGLTIYYRYNVIKWYSLIPAQKNARNIVSKYRTKFLNQNHNKDII SKLATNSYDLKLDLDLKNLAKQSLNFFREIEFMESIEQITLYDNMKNIIIRSKDDYVATNNVRKNIGIESLLLYLDKLLF YTYQKPNQKPTFKHGARITNCFVEFDNNTYPSRANTSLFSANVLIHCESPIILDHAVIAFLKITYNATQQWMYINNISKQ VLTILLLMSLIFFFIIKSSISNVQKIINVQLNANKYLEQARQKAEKENIAKNKFLANVSHELRTPLSAIIGLTEIILSNS HCKINYYNYIRDIHNSGKHLLAVINDILDFSKASANKLTVENVAVDLNKLAASSLRLMYTKAKKAGIKLISKFPPDQIII NADAKRLKQALFNLLSNSIKFTPSKGSITLEISMNELKSLVYIKVIDTGIGIAEQDIPKALSSFEQVNNNLSNQREGTGL GLPLTKKLIYLMEGDFEITSNIGQGTTVTITFKYP
Sequences:
>Translated_515_residues MYNNVLFNYNGQYTKKYMHYRYAIRLSFIAVFLTLVGLTIYYRYNVIKWYSLIPAQKNARNIVSKYRTKFLNQNHNKDII SKLATNSYDLKLDLDLKNLAKQSLNFFREIEFMESIEQITLYDNMKNIIIRSKDDYVATNNVRKNIGIESLLLYLDKLLF YTYQKPNQKPTFKHGARITNCFVEFDNNTYPSRANTSLFSANVLIHCESPIILDHAVIAFLKITYNATQQWMYINNISKQ VLTILLLMSLIFFFIIKSSISNVQKIINVQLNANKYLEQARQKAEKENIAKNKFLANVSHELRTPLSAIIGLTEIILSNS HCKINYYNYIRDIHNSGKHLLAVINDILDFSKASANKLTVENVAVDLNKLAASSLRLMYTKAKKAGIKLISKFPPDQIII NADAKRLKQALFNLLSNSIKFTPSKGSITLEISMNELKSLVYIKVIDTGIGIAEQDIPKALSSFEQVNNNLSNQREGTGL GLPLTKKLIYLMEGDFEITSNIGQGTTVTITFKYP >Mature_515_residues MYNNVLFNYNGQYTKKYMHYRYAIRLSFIAVFLTLVGLTIYYRYNVIKWYSLIPAQKNARNIVSKYRTKFLNQNHNKDII SKLATNSYDLKLDLDLKNLAKQSLNFFREIEFMESIEQITLYDNMKNIIIRSKDDYVATNNVRKNIGIESLLLYLDKLLF YTYQKPNQKPTFKHGARITNCFVEFDNNTYPSRANTSLFSANVLIHCESPIILDHAVIAFLKITYNATQQWMYINNISKQ VLTILLLMSLIFFFIIKSSISNVQKIINVQLNANKYLEQARQKAEKENIAKNKFLANVSHELRTPLSAIIGLTEIILSNS HCKINYYNYIRDIHNSGKHLLAVINDILDFSKASANKLTVENVAVDLNKLAASSLRLMYTKAKKAGIKLISKFPPDQIII NADAKRLKQALFNLLSNSIKFTPSKGSITLEISMNELKSLVYIKVIDTGIGIAEQDIPKALSSFEQVNNNLSNQREGTGL GLPLTKKLIYLMEGDFEITSNIGQGTTVTITFKYP
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=258, Percent_Identity=34.4961240310078, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI48994928, Length=235, Percent_Identity=34.0425531914894, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=34.5381526104418, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1788713, Length=239, Percent_Identity=31.7991631799163, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI87081816, Length=231, Percent_Identity=34.6320346320346, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1786783, Length=305, Percent_Identity=24.9180327868852, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1788549, Length=234, Percent_Identity=29.4871794871795, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1790436, Length=272, Percent_Identity=27.5735294117647, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1786600, Length=218, Percent_Identity=27.9816513761468, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=25.6637168141593, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790861, Length=233, Percent_Identity=27.8969957081545, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082128, Length=298, Percent_Identity=23.1543624161074, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790346, Length=211, Percent_Identity=25.5924170616114, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786912, Length=220, Percent_Identity=25.4545454545455, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 59018; Mature: 59018
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNNVLFNYNGQYTKKYMHYRYAIRLSFIAVFLTLVGLTIYYRYNVIKWYSLIPAQKNAR CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCHHH NIVSKYRTKFLNQNHNKDIISKLATNSYDLKLDLDLKNLAKQSLNFFREIEFMESIEQIT HHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH LYDNMKNIIIRSKDDYVATNNVRKNIGIESLLLYLDKLLFYTYQKPNQKPTFKHGARITN HHCCCCCEEEECCCCEEECCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEE CFVEFDNNTYPSRANTSLFSANVLIHCESPIILDHAVIAFLKITYNATQQWMYINNISKQ EEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHEECCCCCEEEHHHHHHH VLTILLLMSLIFFFIIKSSISNVQKIINVQLNANKYLEQARQKAEKENIAKNKFLANVSH HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRTPLSAIIGLTEIILSNSHCKINYYNYIRDIHNSGKHLLAVINDILDFSKASANKLTV HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEH ENVAVDLNKLAASSLRLMYTKAKKAGIKLISKFPPDQIIINADAKRLKQALFNLLSNSIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEE FTPSKGSITLEISMNELKSLVYIKVIDTGIGIAEQDIPKALSSFEQVNNNLSNQREGTGL ECCCCCCEEEEEEHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC GLPLTKKLIYLMEGDFEITSNIGQGTTVTITFKYP CCCHHHHHHHHCCCCEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MYNNVLFNYNGQYTKKYMHYRYAIRLSFIAVFLTLVGLTIYYRYNVIKWYSLIPAQKNAR CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCHHH NIVSKYRTKFLNQNHNKDIISKLATNSYDLKLDLDLKNLAKQSLNFFREIEFMESIEQIT HHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH LYDNMKNIIIRSKDDYVATNNVRKNIGIESLLLYLDKLLFYTYQKPNQKPTFKHGARITN HHCCCCCEEEECCCCEEECCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEE CFVEFDNNTYPSRANTSLFSANVLIHCESPIILDHAVIAFLKITYNATQQWMYINNISKQ EEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHEECCCCCEEEHHHHHHH VLTILLLMSLIFFFIIKSSISNVQKIINVQLNANKYLEQARQKAEKENIAKNKFLANVSH HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRTPLSAIIGLTEIILSNSHCKINYYNYIRDIHNSGKHLLAVINDILDFSKASANKLTV HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEH ENVAVDLNKLAASSLRLMYTKAKKAGIKLISKFPPDQIIINADAKRLKQALFNLLSNSIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEE FTPSKGSITLEISMNELKSLVYIKVIDTGIGIAEQDIPKALSSFEQVNNNLSNQREGTGL ECCCCCCEEEEEEHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC GLPLTKKLIYLMEGDFEITSNIGQGTTVTITFKYP CCCHHHHHHHHCCCCEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]