Definition | Orientia tsutsugamushi Boryong, complete genome. |
---|---|
Accession | NC_009488 |
Length | 2,127,051 |
Click here to switch to the map view.
The map label for this gene is gmpk [H]
Identifier: 148284451
GI number: 148284451
Start: 766361
End: 767026
Strand: Direct
Name: gmpk [H]
Synonym: OTBS_0788
Alternate gene names: 148284451
Gene position: 766361-767026 (Clockwise)
Preceding gene: 148284450
Following gene: 148284452
Centisome position: 36.03
GC content: 31.83
Gene sequence:
>666_bases ATGTTTATTAGTTTTCCAAAACCTGCTATAGCACTTATAATATCATCTCCATCTGGGGCTGGGAAATCAAGCTTAGCTCA TGCGGTTATTCAAAATAATATCAATATTAAATTCTCTGTTTCAATGACAACTAGAGAAAAACGTAATAATGAAATAAATG GCAAAGACTATATCTTTGTGACAAAAGAACAATTCGAACAGGAAATTAACAACAATACACTTCTTGAATTTTCTAAAGTA TTCAACAACTACTATGGCATTCCAAAAGCTGGGGTGTTAGAAGATCTTAGTCAAGGTCAGAGCATTATTTTTGATATCGA TTGGCAAGGCGCTAAAACAATACGAAAGGCTCTGAAATGTTATGTCGTTAGTGTATGCATACTTCCTCCATCAATGCAAG AGCTAGAAAATAGATTAAAAAAACGTAATAAAGATTCTCCAGAAACTATTCGCTACCGTTTAGAACAAGCAAAAGAAGAT ATTAAGCATTATAGCGAATATGATTATGTAATAGTAAATGACCGCTTTGATCAAGCATTACTTGCTTTGCAATCAATACT GATAGCTGAACAGCATAAGTTAAAAAGACTGAGTTTTAAAAATGATACACTGTTAAATTATGAACAATTGTTACAAAGAG ATGCATGCTTTAATTATAGACAATGA
Upstream 100 bases:
>100_bases AATAGCTTTTATGCAAATAATTATAATATGATATGTTGTATTTTACTTTTAAAAATTAAGTTATTGAATAATAATACAAT TTAGAATATATTGACTTACC
Downstream 100 bases:
>100_bases AATATTGATCTTTTATTTTATTTTACATAAAATGAGGAAAATTGTATAAAAAATGTTTTAGAACTCAAATTAAATTGAGG TACACTAAAATTATATTACA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MFISFPKPAIALIISSPSGAGKSSLAHAVIQNNINIKFSVSMTTREKRNNEINGKDYIFVTKEQFEQEINNNTLLEFSKV FNNYYGIPKAGVLEDLSQGQSIIFDIDWQGAKTIRKALKCYVVSVCILPPSMQELENRLKKRNKDSPETIRYRLEQAKED IKHYSEYDYVIVNDRFDQALLALQSILIAEQHKLKRLSFKNDTLLNYEQLLQRDACFNYRQ
Sequences:
>Translated_221_residues MFISFPKPAIALIISSPSGAGKSSLAHAVIQNNINIKFSVSMTTREKRNNEINGKDYIFVTKEQFEQEINNNTLLEFSKV FNNYYGIPKAGVLEDLSQGQSIIFDIDWQGAKTIRKALKCYVVSVCILPPSMQELENRLKKRNKDSPETIRYRLEQAKED IKHYSEYDYVIVNDRFDQALLALQSILIAEQHKLKRLSFKNDTLLNYEQLLQRDACFNYRQ >Mature_221_residues MFISFPKPAIALIISSPSGAGKSSLAHAVIQNNINIKFSVSMTTREKRNNEINGKDYIFVTKEQFEQEINNNTLLEFSKV FNNYYGIPKAGVLEDLSQGQSIIFDIDWQGAKTIRKALKCYVVSVCILPPSMQELENRLKKRNKDSPETIRYRLEQAKED IKHYSEYDYVIVNDRFDQALLALQSILIAEQHKLKRLSFKNDTLLNYEQLLQRDACFNYRQ
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=198, Percent_Identity=37.3737373737374, Blast_Score=127, Evalue=8e-30, Organism=Homo sapiens, GI226874833, Length=198, Percent_Identity=37.3737373737374, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI4504221, Length=198, Percent_Identity=37.3737373737374, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI38570142, Length=175, Percent_Identity=30.8571428571429, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI14780902, Length=188, Percent_Identity=29.2553191489362, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI4505237, Length=176, Percent_Identity=31.25, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118259, Length=176, Percent_Identity=31.25, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118263, Length=176, Percent_Identity=31.25, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118255, Length=176, Percent_Identity=31.25, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=196, Percent_Identity=42.8571428571429, Blast_Score=173, Evalue=7e-45, Organism=Caenorhabditis elegans, GI193203132, Length=177, Percent_Identity=37.2881355932203, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17508835, Length=177, Percent_Identity=37.2881355932203, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI71984092, Length=114, Percent_Identity=32.4561403508772, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=184, Percent_Identity=38.0434782608696, Blast_Score=123, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356141, Length=181, Percent_Identity=32.0441988950276, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI45554481, Length=189, Percent_Identity=25.3968253968254, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI85724806, Length=189, Percent_Identity=25.3968253968254, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI116007136, Length=189, Percent_Identity=25.3968253968254, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 25595; Mature: 25595
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFISFPKPAIALIISSPSGAGKSSLAHAVIQNNINIKFSVSMTTREKRNNEINGKDYIFV CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCCCCEEEEE TKEQFEQEINNNTLLEFSKVFNNYYGIPKAGVLEDLSQGQSIIFDIDWQGAKTIRKALKC EHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHH YVVSVCILPPSMQELENRLKKRNKDSPETIRYRLEQAKEDIKHYSEYDYVIVNDRFDQAL HHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH LALQSILIAEQHKLKRLSFKNDTLLNYEQLLQRDACFNYRQ HHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCCCC >Mature Secondary Structure MFISFPKPAIALIISSPSGAGKSSLAHAVIQNNINIKFSVSMTTREKRNNEINGKDYIFV CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCCCCEEEEE TKEQFEQEINNNTLLEFSKVFNNYYGIPKAGVLEDLSQGQSIIFDIDWQGAKTIRKALKC EHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHH YVVSVCILPPSMQELENRLKKRNKDSPETIRYRLEQAKEDIKHYSEYDYVIVNDRFDQAL HHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH LALQSILIAEQHKLKRLSFKNDTLLNYEQLLQRDACFNYRQ HHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]