Definition | Orientia tsutsugamushi Boryong, complete genome. |
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Accession | NC_009488 |
Length | 2,127,051 |
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The map label for this gene is 148284450
Identifier: 148284450
GI number: 148284450
Start: 765324
End: 766154
Strand: Direct
Name: 148284450
Synonym: OTBS_0787
Alternate gene names: NA
Gene position: 765324-766154 (Clockwise)
Preceding gene: 148284449
Following gene: 148284451
Centisome position: 35.98
GC content: 34.18
Gene sequence:
>831_bases ATGACCACAGATAACAAACACATTCATGGTAACCATCCAGACAAAAAACCAGGGCCTGGATTTATTGAGAAACTAAAATT GATACTACAGCAACTCAAGGCTTTGTACATGACATTTAAATCATTACTAGAAGATAATACACACGAAAACACACAAAATT TGGAAGAATTAGTCAAACTACTTGCTCAACTTCAAAGTAATTTAGAAGATCATATTGATAAATGCAGTAATACTGTATCA AAACCACAAGAGCAAAGTAACAAACAAAACAATAATCAGCAAATACAAAATAGTAATATTGATAACTGCTCAGTAACTTC GCAAGATGCTACAGTATCATCAAAACAAACTCAGAATATAATACCACCACCATCACCACCACCTCCACCACCTCCACCAC CTCCTTTTCAAGCTCAGAAAGAAAGGTCTGAAACATCATCAAAAAAAAAACAACAAAAAGAAGAAGATGATTCAATCAAG CCAGTAAAACCATCTCCTCAGGAGCTACTAGATAGTATGAAAAGGTTGAAGCATGTAGATAAAGACGACAATTCAGATCG TGGTAAGAAACCTTTTGATAATTCTTTAATGGATGAACTGAAAAAACAGTTAAAAAGCCGTAGGAGTGGAATAGCAGGTG ATATAGATAAAGAAAAAAATAAAAAAAATCCTAAATTAGAAGGTATGGCAAGTAGCTTATCACAAGCTATACCTTATGTA CCTAACAGCAAGGATGGTGATAAAGAAAAACCGATCGTTCCTCCTAAACCAAGTTTCGCAGCTCAATTAACAAATAAATC GAACCAAAAGAACAATAGTAGAGACAGGTAA
Upstream 100 bases:
>100_bases AAGTAAAATACTATAGTAGAAATACTTTTAGTAATTTGCATTAAATAGTGATATACTAAATGTATATAGTAATATTAAAA AATACAAAAAAGTAATTATT
Downstream 100 bases:
>100_bases CCCACTTAGCTAAAGGATATATTCTTACATTACATTTTACACATATAAAAGCTAATTTTGAGCTTTTATATGTAATTGCT CTTCTTAATAAAGCGTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTTDNKHIHGNHPDKKPGPGFIEKLKLILQQLKALYMTFKSLLEDNTHENTQNLEELVKLLAQLQSNLEDHIDKCSNTVS KPQEQSNKQNNNQQIQNSNIDNCSVTSQDATVSSKQTQNIIPPPSPPPPPPPPPPFQAQKERSETSSKKKQQKEEDDSIK PVKPSPQELLDSMKRLKHVDKDDNSDRGKKPFDNSLMDELKKQLKSRRSGIAGDIDKEKNKKNPKLEGMASSLSQAIPYV PNSKDGDKEKPIVPPKPSFAAQLTNKSNQKNNSRDR
Sequences:
>Translated_276_residues MTTDNKHIHGNHPDKKPGPGFIEKLKLILQQLKALYMTFKSLLEDNTHENTQNLEELVKLLAQLQSNLEDHIDKCSNTVS KPQEQSNKQNNNQQIQNSNIDNCSVTSQDATVSSKQTQNIIPPPSPPPPPPPPPPFQAQKERSETSSKKKQQKEEDDSIK PVKPSPQELLDSMKRLKHVDKDDNSDRGKKPFDNSLMDELKKQLKSRRSGIAGDIDKEKNKKNPKLEGMASSLSQAIPYV PNSKDGDKEKPIVPPKPSFAAQLTNKSNQKNNSRDR >Mature_275_residues TTDNKHIHGNHPDKKPGPGFIEKLKLILQQLKALYMTFKSLLEDNTHENTQNLEELVKLLAQLQSNLEDHIDKCSNTVSK PQEQSNKQNNNQQIQNSNIDNCSVTSQDATVSSKQTQNIIPPPSPPPPPPPPPPFQAQKERSETSSKKKQQKEEDDSIKP VKPSPQELLDSMKRLKHVDKDDNSDRGKKPFDNSLMDELKKQLKSRRSGIAGDIDKEKNKKNPKLEGMASSLSQAIPYVP NSKDGDKEKPIVPPKPSFAAQLTNKSNQKNNSRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31017; Mature: 30886
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDNKHIHGNHPDKKPGPGFIEKLKLILQQLKALYMTFKSLLEDNTHENTQNLEELVKL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LAQLQSNLEDHIDKCSNTVSKPQEQSNKQNNNQQIQNSNIDNCSVTSQDATVSSKQTQNI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCC IPPPSPPPPPPPPPPFQAQKERSETSSKKKQQKEEDDSIKPVKPSPQELLDSMKRLKHVD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC KDDNSDRGKKPFDNSLMDELKKQLKSRRSGIAGDIDKEKNKKNPKLEGMASSLSQAIPYV CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCC PNSKDGDKEKPIVPPKPSFAAQLTNKSNQKNNSRDR CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTDNKHIHGNHPDKKPGPGFIEKLKLILQQLKALYMTFKSLLEDNTHENTQNLEELVKL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LAQLQSNLEDHIDKCSNTVSKPQEQSNKQNNNQQIQNSNIDNCSVTSQDATVSSKQTQNI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCC IPPPSPPPPPPPPPPFQAQKERSETSSKKKQQKEEDDSIKPVKPSPQELLDSMKRLKHVD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC KDDNSDRGKKPFDNSLMDELKKQLKSRRSGIAGDIDKEKNKKNPKLEGMASSLSQAIPYV CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCC PNSKDGDKEKPIVPPKPSFAAQLTNKSNQKNNSRDR CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA