Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284452

Identifier: 148284452

GI number: 148284452

Start: 767160

End: 767534

Strand: Direct

Name: 148284452

Synonym: OTBS_0789

Alternate gene names: NA

Gene position: 767160-767534 (Clockwise)

Preceding gene: 148284451

Following gene: 148284453

Centisome position: 36.07

GC content: 32.0

Gene sequence:

>375_bases
ATGGCTCGAGACAATAAACCAATTAGCAACAAATCTTCAGGCTTAATATCAAAATCACAAAAGCAAAATATTAAAGATCT
TGGCAAGAAAATAGATTTAATGATACAACAAGTTGGTACTCTTGATAGTAAAGTGCGATCAAGTTCAGCAGAAGGCAATA
CACTAAATGTTAAAGTAATTAGAGAATTAAATAATGTAATGAAGAGTGTGCCAGATACGCTACAACAATTCTCACAAAAA
ATACTTCAACAATCTAAACTAGCACGTCAACAACCTCAAAAAGGTAAATATAATGATGCCTTTCGTAAGAAAAGAGCTAA
GGCTAAAAAAAAAAAGAACACCTTGAAAAGCAAAAGCAAGAATTCATGGGGTTAG

Upstream 100 bases:

>100_bases
GAGGAAAATTGTATAAAAAATGTTTTAGAACTCAAATTAAATTGAGGTACACTAAAATTATATTACAATATTACATAACA
AAACATTTAAAGTAATTATT

Downstream 100 bases:

>100_bases
TATCTAAATTAGGCGAGGAAATGAAGCTAGTAGGCAAAACAGGTGGACAGATGTCTGAGATAAAAGATACTTTAGATAAG
CTTCATGCAATAGTTAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MARDNKPISNKSSGLISKSQKQNIKDLGKKIDLMIQQVGTLDSKVRSSSAEGNTLNVKVIRELNNVMKSVPDTLQQFSQK
ILQQSKLARQQPQKGKYNDAFRKKRAKAKKKKNTLKSKSKNSWG

Sequences:

>Translated_124_residues
MARDNKPISNKSSGLISKSQKQNIKDLGKKIDLMIQQVGTLDSKVRSSSAEGNTLNVKVIRELNNVMKSVPDTLQQFSQK
ILQQSKLARQQPQKGKYNDAFRKKRAKAKKKKNTLKSKSKNSWG
>Mature_123_residues
ARDNKPISNKSSGLISKSQKQNIKDLGKKIDLMIQQVGTLDSKVRSSSAEGNTLNVKVIRELNNVMKSVPDTLQQFSQKI
LQQSKLARQQPQKGKYNDAFRKKRAKAKKKKNTLKSKSKNSWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13985; Mature: 13854

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDNKPISNKSSGLISKSQKQNIKDLGKKIDLMIQQVGTLDSKVRSSSAEGNTLNVKVI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RELNNVMKSVPDTLQQFSQKILQQSKLARQQPQKGKYNDAFRKKRAKAKKKKNTLKSKSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
NSWG
CCCC
>Mature Secondary Structure 
ARDNKPISNKSSGLISKSQKQNIKDLGKKIDLMIQQVGTLDSKVRSSSAEGNTLNVKVI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RELNNVMKSVPDTLQQFSQKILQQSKLARQQPQKGKYNDAFRKKRAKAKKKKNTLKSKSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
NSWG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA