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The map label for this gene is ycjS [H]

Identifier: 148266643

GI number: 148266643

Start: 243899

End: 244939

Strand: Direct

Name: ycjS [H]

Synonym: SaurJH9_0203

Alternate gene names: 148266643

Gene position: 243899-244939 (Clockwise)

Preceding gene: 148266642

Following gene: 148266644

Centisome position: 8.39

GC content: 39.77

Gene sequence:

>1041_bases
ATGACAAAATTAAAAGTTGGTGTGATAGGTGTTGGTGGCATTGCACAAGACCGTCATATTCCAGCATTGCTGAAACTCAA
AGACACAGTCTCATTAGTTGCAGTACAAGATATTAATACAGTGCAGATGATTGATGTTGCGAAGCGCTTTAATATACCTC
AGGCAGTTGAGACACCTAGCGAGCTGTTTAAACTTGTTGATGCGGTGGTCATTTGTACACCCAATAAATTCCATGCTGAT
CTTTCTATAGAAGCATTGAACCATGGTGTCCATGTCTTATGCGAAAAGCCAATGGCAATGACGACGGAAGAGTGTGATCG
CATGATTGAAGCGGCTAATAAAAATCACAAATTATTAACTGTCGCTTATCATTATCGTCACACAGATGTCGCTATGACTG
CTAAAAAAGCAATTGAAGCAGGTGTGGTTGGTAAACCATTAGTAGCACGTGTACAAGCGATGCGTAGGCGTAAAGTACCT
GGGTGGGGCGTTTTTACCAATAAAGCGTTGCAAGGTGGCGGTAGTTTAATCGATTATGGTTGCCACTTGTTAGACTTATC
TTTGTGGCTATTAGGTAAAGATATGGTGCCGCATGAAGTGCTAGGAAAAACATATAATCAATTGAGCAAACAACCGAATC
AAATTAATGATTGGGGAACATTTGATCACACTAAATTTGATGTCGATGATCATGTTACTAGTTATATGACATTTGCCAAT
CGAGCAAGCATGCAGTTTGAATGTTCGTGGTCTGCAAATATAAAGGAAGATAAGGTACACGTTAGTTTATCAGGAGAAGA
TGGCGGTATCAATTTATTTCCATTTGAAATATATGAGCCCCGCTTTGGAACTATTTTTGAAAGCAAAGCTAATGTTGAGC
ATAACGAAGACATTGCTGGTGAGAGACAGGCGCGTAACTTTGTCAATGCGTGTTTAGGTATAGAAGAGATTGTGGTGAAA
CCGGAAGAAGCACGCAATGTAAATGCCCTTATAGAAGCGATTTATCGTAGCGATCTTGATAACAAGAGCATACAACTTTA
A

Upstream 100 bases:

>100_bases
AGCAATGGTAGTTACAAAAATTCTTGAAGCGATTTATCAGTCTGCAAAATCAGGCAAAGCAATTTACTTTGAATAACATC
ATACGGTAAGGAGGCACATC

Downstream 100 bases:

>100_bases
TGATTATTATATATAATACAAAATTCTCAATATAAAAAGAAGGAGTGCTTTTCAATGAAAATAGGTGTATTTTCAGTATT
ATTTTACGATAAAAATTTTG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPQAVETPSELFKLVDAVVICTPNKFHAD
LSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLTVAYHYRHTDVAMTAKKAIEAGVVGKPLVARVQAMRRRKVP
GWGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVK
PEEARNVNALIEAIYRSDLDNKSIQL

Sequences:

>Translated_346_residues
MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPQAVETPSELFKLVDAVVICTPNKFHAD
LSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLTVAYHYRHTDVAMTAKKAIEAGVVGKPLVARVQAMRRRKVP
GWGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVK
PEEARNVNALIEAIYRSDLDNKSIQL
>Mature_345_residues
TKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPQAVETPSELFKLVDAVVICTPNKFHADL
SIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLTVAYHYRHTDVAMTAKKAIEAGVVGKPLVARVQAMRRRKVPG
WGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFANR
ASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVKP
EEARNVNALIEAIYRSDLDNKSIQL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=348, Percent_Identity=31.8965517241379, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI1787307, Length=192, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323975, Length=206, Percent_Identity=28.6407766990291, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581117, Length=281, Percent_Identity=26.3345195729537, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38551; Mature: 38420

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPQAVETPS
CCEEEEEEEEECCCCCCCCCCHHEEECCCEEEEEECCCCHHHHHHHHHHCCCCHHHCCHH
ELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLT
HHHHHHHEEEEECCCCCCCCEEEEHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
VAYHYRHTDVAMTAKKAIEAGVVGKPLVARVQAMRRRKVPGWGVFTNKALQGGGSLIDYG
EEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHH
CHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHC
RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAG
CCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCC
ERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLDNKSIQL
HHHHHHHHHHHHCHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMIDVAKRFNIPQAVETPS
CEEEEEEEEECCCCCCCCCCHHEEECCCEEEEEECCCCHHHHHHHHHHCCCCHHHCCHH
ELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTTEECDRMIEAANKNHKLLT
HHHHHHHEEEEECCCCCCCCEEEEHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
VAYHYRHTDVAMTAKKAIEAGVVGKPLVARVQAMRRRKVPGWGVFTNKALQGGGSLIDYG
EEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHH
CHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDWGTFDHTKFDVDDHVTSYMTFAN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHC
RASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFEIYEPRFGTIFESKANVEHNEDIAG
CCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCC
ERQARNFVNACLGIEEIVVKPEEARNVNALIEAIYRSDLDNKSIQL
HHHHHHHHHHHHCHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]